Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.3e-74 283.1 157 100.0
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.4e-73 279.6 157 98.7
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 5.5e-73 277.7 157 98.1
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.2e-72 276.6 157 97.5
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 1.6e-72 276.2 157 96.8
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 3.9e-71 271.6 161 95.0
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 3.4e-67 258.5 161 90.1
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 1.3e-63 246.5 161 85.1
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 3.8e-58 228.4 161 81.4
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 9.3e-57 223.8 158 76.6
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.7e-56 222.2 159 79.9
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.0e-55 220.3 161 77.0
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 5.1e-55 218.0 161 77.6
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.3e-50 203.4 156 71.8
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.2e-45 186.0 153 67.3
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 6.3e-45 184.5 130 75.4
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.4e-39 166.8 154 60.4
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.8e-39 166.4 149 63.1
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.3e-39 166.0 158 59.5
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 5.2e-39 164.9 150 59.3
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.6e-38 162.5 133 62.4
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 3.3e-38 162.2 150 59.3
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 5.7e-38 161.4 157 54.8
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 1.7e-37 159.8 147 59.2
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 1.7e-37 159.8 142 61.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.2e-37 159.5 157 57.3
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 2.2e-37 159.5 130 63.1
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 2.8e-37 159.1 148 60.1
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 2.8e-37 159.1 149 57.7
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 3.7e-37 158.7 153 58.2
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.1e-36 157.1 150 58.0
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.1e-36 157.1 151 58.3
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.1e-36 157.1 142 61.3
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.1e-36 157.1 132 62.1
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 1.4e-36 156.8 147 57.8
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.8e-36 156.4 157 58.0
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.8e-36 156.4 157 58.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.8e-36 156.4 157 54.8
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.8e-36 156.4 116 69.8
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 4.1e-36 155.2 142 59.2
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 4.1e-36 155.2 137 59.9
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 7.0e-36 154.5 157 56.7
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 9.1e-36 154.1 158 55.1
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 9.1e-36 154.1 146 59.6
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.2e-35 153.7 140 57.9
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.2e-35 153.7 140 57.9
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.2e-35 153.7 137 59.9
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.6e-35 153.3 157 54.8
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.6e-35 153.3 130 62.3
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.6e-35 153.3 144 59.7
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 1.6e-35 153.3 154 55.2
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 2.0e-35 152.9 112 68.8
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 5.9e-35 151.4 152 53.3
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 5.9e-35 151.4 133 58.6
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 5.9e-35 151.4 128 60.2
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 7.7e-35 151.0 145 55.9
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.0e-34 150.6 131 59.5
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.3e-34 150.2 149 53.7
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.7e-34 149.8 109 69.7
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.7e-34 149.8 125 63.2
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 2.2e-34 149.4 142 56.3
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.2e-34 149.4 126 57.9
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 2.2e-34 149.4 131 61.1
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 3.8e-34 148.7 154 52.6
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 3.8e-34 148.7 131 59.5
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 5.0e-34 148.3 146 59.6
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 6.5e-34 147.9 126 61.1
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 6.5e-34 147.9 149 53.0
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.1e-33 147.1 155 53.5
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.1e-33 147.1 126 57.1
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.5e-33 146.7 137 54.7
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.5e-33 146.7 151 51.7
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.5e-33 146.7 157 51.0
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.9e-33 146.4 145 55.2
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.9e-33 146.4 148 55.4
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.9e-33 146.4 152 50.7
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 2.5e-33 146.0 164 51.2
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 3.2e-33 145.6 128 57.8
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 4.2e-33 145.2 152 50.7
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 5.5e-33 144.8 141 55.3
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 5.5e-33 144.8 142 54.2
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 9.4e-33 144.1 141 54.6
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 9.4e-33 144.1 148 54.7
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 1.2e-32 143.7 145 55.9
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 2.1e-32 142.9 154 53.2
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 2.7e-32 142.5 125 56.8
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.7e-32 142.5 141 53.9
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.7e-32 142.5 141 53.9
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 3.6e-32 142.1 128 56.2
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 3.6e-32 142.1 128 56.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 4.7e-32 141.7 125 60.0
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.4e-31 140.2 147 52.4
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.8e-31 139.8 150 48.0
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 1.8e-31 139.8 133 56.4
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 2.3e-31 139.4 142 53.5
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.0e-31 139.0 137 52.6
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 4.0e-31 138.7 128 58.6
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 5.2e-31 138.3 146 52.7
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 5.2e-31 138.3 157 49.7
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 6.7e-31 137.9 156 48.7
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 8.8e-31 137.5 132 54.5
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 9.7e-30 134.0 136 52.2
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.3e-29 133.7 138 52.2
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 6.3e-29 131.3 163 47.2
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.8e-28 129.8 139 51.8
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.8e-28 129.8 126 58.7
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 7.0e-28 127.9 172 44.8
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.2e-27 127.1 155 47.7
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 4.5e-27 125.2 218 40.8
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 4.5e-27 125.2 138 50.0
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.0e-26 124.0 146 49.3
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.0e-26 124.0 104 60.6
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 9.4e-25 117.5 112 55.4
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 2.2e-21 106.3 76 68.4
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.1e-20 104.0 76 67.1
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.0e-18 95.1 98 51.0
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 3.0e-15 85.9 70 62.9
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 6.8e-15 84.7 158 36.7
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-14 84.0 137 38.7
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.5e-14 83.6 133 41.4
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 2.2e-13 79.7 95 46.3
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 7.8e-11 71.2 67 52.2
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.2e-06 57.4 127 32.3


User provided reference genes

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