Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p25000 Brassica napus HOM05D014281 ORTHO05D027372 1.4e-84 316.2 158 100.0
BolC1t02444H Brassica oleracea HOM05D014281 ORTHO05D027372 1.4e-84 316.2 158 100.0
BcaB03g12595 Brassica carinata HOM05D014281 ORTHO05D027372 2.2e-53 212.6 137 75.9
BraA09t38151Z Brassica rapa HOM05D014281 ORTHO05D027372 6.1e-48 194.5 156 67.3
A08p19780 Brassica napus HOM05D014281 ORTHO05D040471 2.7e-27 125.9 160 50.6
BraA08t33938Z Brassica rapa HOM05D014281 ORTHO05D040471 4.0e-23 112.1 134 49.3
BcaB06g28381 Brassica carinata HOM05D014281 ORTHO05D093065 2.0e-19 99.8 70 74.3
C08p11260 Brassica napus HOM05D014281 ORTHO05D041151 2.0e-19 99.8 130 46.2
C08p11270 Brassica napus HOM05D014281 ORTHO05D101708 6.4e-13 78.2 119 44.5
CARHR091170 Cardamine hirsuta HOM05D008709 ORTHO05D011440 5.4e-12 75.1 153 37.3
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 1.6e-11 73.6 150 37.3
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 2.1e-11 73.2 153 39.9
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 2.3e-10 69.7 131 39.7
BcaC06g31532 Brassica carinata HOM05D023624 ORTHO05D032369 3.9e-10 68.9 143 37.8
BraA01t03864Z Brassica rapa HOM05D008709 ORTHO05D024458 6.6e-10 68.2 164 37.2
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 1.1e-09 67.4 151 37.1
BcaB04g18887 Brassica carinata HOM05D008709 ORTHO05D011440 1.9e-09 66.6 155 36.1
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 3.3e-09 65.9 156 37.2
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 4.3e-09 65.5 156 36.5
C01p48280 Brassica napus HOM05D008709 ORTHO05D024458 4.3e-09 65.5 159 37.1
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 7.3e-09 64.7 115 40.9
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 7.3e-09 64.7 115 40.9
C03p48130 Brassica napus HOM05D008709 ORTHO05D011440 1.2e-08 63.9 160 31.9
BolC3t17093H Brassica oleracea HOM05D008709 ORTHO05D011440 1.2e-08 63.9 160 31.9
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 2.1e-08 63.2 154 36.4
A01p38070 Brassica napus HOM05D008709 ORTHO05D024458 2.8e-08 62.8 130 37.7
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 4.7e-08 62.0 149 36.9
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 4.7e-08 62.0 149 36.9
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 6.2e-08 61.6 119 36.1
BcaC09g48582 Brassica carinata HOM05D008709 ORTHO05D024458 1.1e-07 60.8 130 40.0
BolC1t04791H Brassica oleracea HOM05D008709 ORTHO05D024458 1.1e-07 60.8 159 35.8
CARHR091180 Cardamine hirsuta HOM05D008709 ORTHO05D011440 2.3e-07 59.7 158 33.5
BcaC01g03840 Brassica carinata HOM05D008709 ORTHO05D021804 4.0e-07 58.9 157 34.4
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 4.0e-07 58.9 156 33.3
BolC8t48800H Brassica oleracea HOM05D014281 ORTHO05D041151 5.2e-07 58.5 59 54.2
CARHR091150 Cardamine hirsuta HOM05D008709 ORTHO05D011440 8.9e-07 57.8 116 31.9
BcaB04g18874 Brassica carinata HOM05D008709 ORTHO05D011440 1.2e-06 57.4 121 36.4
BcaB04g18875 Brassica carinata HOM05D008709 ORTHO05D021804 1.2e-06 57.4 116 38.8
BraA03t13114Z Brassica rapa HOM05D008709 ORTHO05D011440 1.2e-06 57.4 153 34.6
THA.LOC104810941 Tarenaya hassleriana HOM05D002139 ORTHO05D002264 2.0e-06 56.6 156 30.8


User provided reference genes

Program Settings