Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 2.6e-31 138.3 80 100.0
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 1.3e-30 136.0 80 97.5
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 3.0e-27 124.8 80 85.0
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 4.3e-26 120.9 80 90.0
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 4.3e-26 120.9 80 90.0
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 4.3e-26 120.9 80 90.0
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 6.9e-24 113.6 80 81.2
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 3.4e-23 111.3 81 84.0
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 3.4e-23 111.3 81 84.0
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 2.9e-22 108.2 81 81.5
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 5.1e-19 97.4 81 72.8
BcaNung01582 Brassica carinata HOM05D005953 ORTHO05D004056 8.8e-19 96.7 80 76.2
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 2.6e-18 95.1 81 71.6
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 2.4e-16 88.6 81 70.4
C08p10750 Brassica napus HOM05D005953 ORTHO05D004056 2.4e-16 88.6 81 66.7
BolC8t48747H Brassica oleracea HOM05D005953 ORTHO05D004056 2.4e-16 88.6 81 66.7
Thhalv10026705m.g Eutrema salsugineum HOM05D005953 ORTHO05D004056 7.7e-15 83.6 81 70.4
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 9.4e-13 76.6 80 66.2
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 2.8e-09 65.1 80 52.5
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 6.3e-09 63.9 81 53.1
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 8.2e-09 63.5 80 52.5
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.4e-08 62.0 84 53.6
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 7.0e-08 60.5 86 54.7
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.6e-07 59.3 80 52.5
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 2.0e-07 58.9 80 48.8
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 2.7e-07 58.5 82 51.2
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 3.5e-07 58.2 86 50.0
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 3.5e-07 58.2 85 48.2
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 4.5e-07 57.8 80 57.5
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 4.5e-07 57.8 81 51.9
DCAR_009746 Daucus carota HOM05D005953 ORTHO05D004056 4.5e-07 57.8 80 41.2
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 5.9e-07 57.4 80 45.0
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 5.9e-07 57.4 80 50.0
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.7e-07 57.0 80 48.8
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 7.7e-07 57.0 80 48.8
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 7.7e-07 57.0 80 50.0
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.0e-06 56.6 80 48.8
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 1.3e-06 56.2 85 45.9
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 1.3e-06 56.2 80 48.8
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 1.7e-06 55.8 90 42.2
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 1.7e-06 55.8 80 52.5
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.2e-06 55.5 80 45.0
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 2.2e-06 55.5 80 47.5
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 2.9e-06 55.1 80 53.8
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 3.8e-06 54.7 83 47.0
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 5.0e-06 54.3 80 43.8
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 5.0e-06 54.3 84 52.4
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 5.0e-06 54.3 80 51.2
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 8.5e-06 53.5 80 45.0
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 8.5e-06 53.5 80 51.2


User provided reference genes

Program Settings