Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 2.2e-199 698.7 354 100.0
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.9e-190 669.1 354 96.9
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 3.5e-160 568.5 325 90.2
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 7.8e-160 567.4 322 90.1
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.2e-157 560.1 323 92.0
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.2e-152 543.5 323 85.8
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.4e-145 520.0 330 83.6
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 1.4e-145 520.0 332 83.7
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 1.3e-143 513.5 332 82.5
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 6.2e-141 504.6 334 80.5
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 4.4e-139 498.4 333 80.5
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.3e-138 496.9 324 80.6
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 2.2e-138 496.1 322 81.4
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 6.4e-138 494.6 333 79.6
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 4.6e-136 488.4 333 79.3
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.1e-134 483.8 331 78.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.1e-132 477.2 332 79.5
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.4e-113 412.9 353 65.2
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 9.3e-105 384.4 267 74.2
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 5.1e-103 378.6 260 73.5
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 2.2e-93 346.7 284 64.4
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 2.0e-91 340.1 313 61.0
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 2.0e-91 340.1 258 64.7
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.7e-90 337.0 273 64.1
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 3.8e-90 335.9 315 58.4
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.5e-90 335.1 260 65.0
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 8.5e-90 334.7 312 57.7
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.1e-89 334.3 287 60.6
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 4.2e-89 332.4 253 67.6
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 5.5e-89 332.0 282 62.1
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 5.5e-89 332.0 274 63.5
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 9.4e-89 331.3 260 65.8
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 2.1e-88 330.1 253 67.2
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 2.1e-88 330.1 266 64.7
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 4.7e-88 328.9 248 66.5
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 6.1e-88 328.6 253 67.6
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 7.9e-88 328.2 331 55.3
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.8e-87 327.0 282 60.3
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 8.8e-87 324.7 268 59.7
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 9.7e-86 321.2 262 62.2
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 2.4e-84 316.6 263 61.6
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 2.4e-84 316.6 339 53.1
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.2e-83 314.3 237 64.6
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 1.5e-83 313.9 264 61.0
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 7.7e-83 311.6 247 63.2
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.0e-82 311.2 247 63.6
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.7e-82 310.5 247 63.2
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.2e-82 310.1 247 63.6
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.9e-81 307.0 247 63.2
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 4.2e-81 305.8 254 60.2
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 5.5e-81 305.4 250 62.4
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 7.2e-81 305.1 261 57.9
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.1e-80 303.5 266 57.5
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.7e-80 303.1 259 57.5
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 4.7e-80 302.4 261 57.1
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 6.1e-80 302.0 266 57.5
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.3e-79 300.1 287 54.4
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 3.0e-79 299.7 259 55.6
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 5.2e-79 298.9 237 61.6
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.1e-78 297.7 266 59.0
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 2.0e-78 297.0 236 60.6
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.2e-77 293.5 259 58.3
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 2.8e-77 293.1 246 56.9
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 1.8e-76 290.4 249 58.6
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 1.8e-76 290.4 262 57.3
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 4.1e-76 289.3 252 58.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 4.1e-76 289.3 260 56.5
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.2e-75 287.7 257 57.2
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 1.6e-75 287.3 289 52.6
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 7.7e-75 285.0 256 57.0
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 1.3e-74 284.3 246 56.5
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.2e-74 283.5 261 55.2
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 2.2e-74 283.5 260 58.1
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 2.2e-74 283.5 243 59.3
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 2.9e-74 283.1 254 56.3
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 2.9e-74 283.1 252 58.3
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.8e-74 282.7 266 56.4
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 5.0e-74 282.3 247 59.1
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 6.5e-74 282.0 260 56.5
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.1e-73 281.2 250 56.8
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 7.2e-73 278.5 318 50.0
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.2e-72 277.7 255 54.9
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 3.6e-72 276.2 275 51.6
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 6.1e-72 275.4 250 56.8
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 1.4e-71 274.2 266 55.3
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.4e-71 274.2 261 53.3
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 3.0e-71 273.1 205 62.4
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 6.7e-71 271.9 252 54.4
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.5e-70 270.8 261 54.4
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.6e-70 270.0 252 55.6
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.3e-69 267.7 325 46.8
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.8e-69 265.8 261 53.3
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 6.3e-69 265.4 241 55.2
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.1e-68 264.6 270 51.1
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 7.0e-68 261.9 290 49.3
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 2.7e-67 260.0 286 46.9
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 7.7e-67 258.5 334 47.0
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.0e-66 258.1 248 52.0
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 1.9e-65 253.8 292 49.0
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 2.3e-63 246.9 212 57.1
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 3.4e-62 243.0 255 50.6
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 4.4e-62 242.7 216 54.6
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 1.3e-61 241.1 299 47.2
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 7.8e-51 205.3 211 50.7
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.2e-46 191.4 147 66.0
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 3.2e-44 183.3 162 54.9
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 8.6e-26 122.1 118 52.5
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.9e-21 107.1 242 34.3
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 8.7e-18 95.5 196 34.7
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 4.3e-17 93.2 252 28.6
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 3.3e-09 67.0 282 19.5
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 2.8e-08 63.9 97 43.3
Mapoly0028s0045 Marchantia polymorpha HOM05D037891 ORTHO05D008297 5.3e-07 59.7 218 24.8
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 5.8e-06 56.2 55 50.9
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 7.6e-06 55.8 54 50.0
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 9.9e-06 55.5 93 41.9


User provided reference genes

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