Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p24010 Brassica napus HOM05D065086 ORTHO05D032039 1.0e-123 446.8 238 100.0
BraA06t25611Z Brassica rapa HOM05D065086 ORTHO05D032039 8.6e-46 188.0 123 88.6
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 2.3e-43 179.9 237 50.6
BraA02t09306Z Brassica rapa HOM05D000003 ORTHO05D000007 2.8e-28 129.8 76 75.0
A10p04200 Brassica napus HOM05D000003 ORTHO05D000007 4.7e-28 129.0 77 75.3
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-27 127.9 79 70.9
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 1.4e-27 127.5 85 67.1
BcaC01g05180 Brassica carinata HOM05D000003 ORTHO05D000007 1.8e-27 127.1 74 75.7
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 3.1e-27 126.3 150 48.0
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 3.1e-27 126.3 150 48.0
Thhalv10015497m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.0e-27 125.9 77 71.4
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 5.3e-27 125.6 241 38.2
A09p40210 Brassica napus HOM05D000003 ORTHO05D000007 9.0e-27 124.8 272 36.0
BraA09t39519Z Brassica rapa HOM05D000003 ORTHO05D000007 9.0e-27 124.8 272 36.0
C05p26910 Brassica napus HOM05D000003 ORTHO05D000007 1.2e-26 124.4 76 71.1
BraA06t25893Z Brassica rapa HOM05D000003 ORTHO05D000007 1.5e-26 124.0 74 70.3
Thhalv10000459m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.0e-26 123.6 111 54.1
A03p34860 Brassica napus HOM05D000003 ORTHO05D000007 2.6e-26 123.2 171 43.9
Thhalv10002285m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.4e-26 122.5 182 41.2
BolC5t32258H Brassica oleracea HOM05D000003 ORTHO05D000007 7.6e-26 121.7 77 70.1
Thhalv10015367m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 7.6e-26 121.7 183 41.5
BcaC08g45218 Brassica carinata HOM05D000003 ORTHO05D000007 1.7e-25 120.6 162 44.4
C04p45080 Brassica napus HOM05D028159 ORTHO05D028005 1.7e-25 120.6 243 39.1
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 2.2e-25 120.2 162 43.8
Thhalv10017665m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.2e-25 120.2 121 50.4
BcaB07g33765 Brassica carinata HOM05D000003 ORTHO05D000007 3.8e-25 119.4 74 68.9
A03p52160 Brassica napus HOM05D000003 ORTHO05D000007 3.8e-25 119.4 80 66.2
A06p28910 Brassica napus HOM05D000003 ORTHO05D000007 6.4e-25 118.6 77 67.5
BcaC01g00760 Brassica carinata HOM05D000003 ORTHO05D000007 8.4e-25 118.2 239 39.3
BcaC05g25979 Brassica carinata HOM05D000003 ORTHO05D000007 8.4e-25 118.2 238 41.2
BolC9t58036H Brassica oleracea HOM05D000003 ORTHO05D000007 8.4e-25 118.2 177 44.6
BolC9t55311H Brassica oleracea HOM05D000003 ORTHO05D000007 1.1e-24 117.9 182 41.8
BcaB03g14792 Brassica carinata HOM05D000003 ORTHO05D000007 1.4e-24 117.5 80 68.8
BraA01t03255Z Brassica rapa HOM05D000003 ORTHO05D000007 1.9e-24 117.1 187 41.2
BolC6t35819H Brassica oleracea HOM05D000003 ORTHO05D000007 4.2e-24 115.9 242 38.8
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 5.4e-24 115.5 209 38.3
BcaC08g43363 Brassica carinata HOM05D000003 ORTHO05D000007 5.4e-24 115.5 178 42.7
CARHR110840 Cardamine hirsuta HOM05D000003 ORTHO05D000007 5.4e-24 115.5 78 65.4
C02p22170 Brassica napus HOM05D000003 ORTHO05D028000 9.3e-24 114.8 160 43.8
BraA09t40338Z Brassica rapa HOM05D000003 ORTHO05D000007 2.1e-23 113.6 237 35.9
Thhalv10017828m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.1e-23 113.6 82 59.8
BcaB02g07776 Brassica carinata HOM05D000003 ORTHO05D000007 3.5e-23 112.8 221 37.6
BcaC04g21713 Brassica carinata HOM05D000003 ORTHO05D000007 3.5e-23 112.8 166 42.2
BcaB01g03208 Brassica carinata HOM05D000003 ORTHO05D000007 4.6e-23 112.5 74 63.5
C01p16120 Brassica napus HOM05D000003 ORTHO05D000007 1.0e-22 111.3 86 60.5
BolC9t55712H Brassica oleracea HOM05D000003 ORTHO05D000007 1.0e-22 111.3 161 42.2
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-22 110.9 236 36.4
BcaC04g20827 Brassica carinata HOM05D000003 ORTHO05D000007 2.3e-22 110.2 77 67.5
BolC9t56730H Brassica oleracea HOM05D000003 ORTHO05D000007 2.3e-22 110.2 77 67.5
BraA04t18354Z Brassica rapa HOM05D000003 ORTHO05D000007 3.0e-22 109.8 133 45.9
Thhalv10003309m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 5.1e-22 109.0 82 57.3
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 8.7e-22 108.2 166 43.4
Thhalv10022289m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.1e-21 107.8 242 35.5
A03p33310 Brassica napus HOM05D000003 ORTHO05D000007 1.9e-21 107.1 238 35.3
BcaC05g26008 Brassica carinata HOM05D000003 ORTHO05D000007 2.5e-21 106.7 173 38.7
Thhalv10024027m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.3e-21 105.9 219 37.0
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 7.3e-21 105.1 240 36.2
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 7.3e-21 105.1 146 45.9
C07p21920 Brassica napus HOM05D000003 ORTHO05D041027 1.3e-20 104.4 99 51.5
BcaC07g37540 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-20 104.0 244 38.1
BcaNung01863 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-20 104.0 244 38.1
BcaNung04603 Brassica carinata HOM05D000003 ORTHO05D000007 3.6e-20 102.8 59 74.6
BolC7t42724H Brassica oleracea HOM05D000003 ORTHO05D041027 3.6e-20 102.8 99 50.5
BraA05t20679Z Brassica rapa HOM05D000003 ORTHO05D000007 4.8e-20 102.4 110 45.5
BcaNung03157 Brassica carinata HOM05D000003 ORTHO05D000007 6.2e-20 102.1 59 74.6
BcaB08g36128 Brassica carinata HOM05D000003 ORTHO05D000007 6.9e-19 98.6 180 36.7
BcaC04g23526 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-18 97.4 82 61.0
BcaB03g13717 Brassica carinata HOM05D000003 ORTHO05D032039 5.8e-18 95.5 103 48.5
BolC4t24667H Brassica oleracea HOM05D000003 ORTHO05D000007 5.8e-18 95.5 99 47.5
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 1.3e-17 94.4 135 38.5
Thhalv10009475m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.9e-17 93.2 243 32.1
BcaC05g27646 Brassica carinata HOM05D000003 ORTHO05D023912 6.4e-17 92.0 85 54.1
C05p36340 Brassica napus HOM05D000003 ORTHO05D023912 6.4e-17 92.0 85 54.1
BcaB02g11235 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-15 87.4 237 34.2
BcaC02g09582 Brassica carinata HOM05D000003 ORTHO05D000007 3.0e-14 83.2 163 36.2
BolC3t19489H Brassica oleracea HOM05D000112 ORTHO05D032741 3.0e-14 83.2 59 57.6
BcaC03g13859 Brassica carinata HOM05D000003 ORTHO05D000007 5.1e-14 82.4 98 42.9
BcaC04g18816 Brassica carinata HOM05D000003 ORTHO05D032545 1.5e-13 80.9 225 32.4
THA.LOC104798910 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.3e-12 77.8 64 51.6
C02p34560 Brassica napus HOM05D000003 ORTHO05D023912 6.2e-12 75.5 45 66.7
THA.LOC104800051 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 8.1e-12 75.1 115 36.5
BcaB03g14903 Brassica carinata HOM05D039480 ORTHO05D000007 1.1e-11 74.7 57 59.6
THA.LOC104810236 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.4e-11 74.3 81 40.7
THA.LOC104820083 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.4e-11 73.6 112 34.8
THA.LOC104803404 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 4.0e-11 72.8 153 35.9
THA.LOC104804833 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 1.2e-10 71.2 176 31.8
THA.LOC109116097 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 3.4e-10 69.7 155 34.8
BcaC01g03259 Brassica carinata HOM05D000003 ORTHO05D000007 4.9e-09 65.9 251 30.3
THA.LOC104810140 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.9e-08 63.9 94 30.9
BcaNung05393 Brassica carinata HOM05D002344 ORTHO05D002954 2.5e-08 63.5 145 40.0
C03p71920 Brassica napus HOM05D000112 ORTHO05D032741 9.3e-08 61.6 47 53.2
A06p19980 Brassica napus HOM05D000112 ORTHO05D010432 2.1e-07 60.5 130 32.3
A01p34820 Brassica napus HOM05D000003 ORTHO05D000007 3.5e-07 59.7 37 62.2
THA.LOC104799764 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.8e-06 57.4 182 26.9


User provided reference genes

Program Settings