Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 5.0e-94 347.8 184 100.0
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 1.9e-93 345.9 184 97.8
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 5.6e-93 344.4 184 97.3
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 2.9e-89 332.0 184 92.4
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 2.9e-89 332.0 184 93.5
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-88 330.1 184 90.8
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 1.1e-88 330.1 184 92.9
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 7.0e-88 327.4 184 93.5
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-87 326.2 184 92.4
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 1.6e-87 326.2 184 92.4
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 1.6e-87 326.2 184 92.4
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 2.0e-87 325.9 184 91.8
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 2.0e-87 325.9 184 89.7
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 2.7e-87 325.5 184 90.2
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 2.7e-87 325.5 184 90.2
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-87 325.5 184 93.5
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-87 325.5 184 90.2
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-87 325.5 184 90.2
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 2.7e-87 325.5 184 90.2
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 4.6e-87 324.7 184 91.3
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 4.6e-87 324.7 184 91.3
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 6.0e-87 324.3 184 90.8
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 5.0e-86 321.2 184 90.2
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 1.9e-85 319.3 184 89.7
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 2.5e-85 318.9 184 89.7
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 2.5e-85 318.9 184 89.7
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 3.3e-85 318.5 184 88.0
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 3.3e-85 318.5 184 88.0
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 5.6e-85 317.8 209 81.8
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 2.8e-84 315.5 184 91.3
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 7.5e-82 307.4 184 91.3
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 7.5e-82 307.4 184 91.3
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 7.5e-82 307.4 184 91.3
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 7.5e-82 307.4 184 91.3
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 1.7e-81 306.2 185 85.4
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 2.9e-81 305.4 199 83.4
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 7.1e-80 300.8 199 81.4
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 7.6e-66 254.2 134 94.8
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 2.3e-62 242.7 187 68.4
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 4.0e-59 231.9 184 65.8
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 1.2e-55 220.3 186 64.5
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 8.1e-52 207.6 183 59.0
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 8.1e-52 207.6 183 59.0
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.4e-51 206.8 186 61.8
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 3.1e-51 205.7 186 60.8
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 4.0e-51 205.3 183 59.0
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 4.0e-51 205.3 184 59.8
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 3.4e-50 202.2 184 58.2
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 1.7e-49 199.9 183 59.6
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.2e-49 199.5 184 59.8
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 1.4e-48 196.8 183 57.9
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 3.2e-48 195.7 116 87.1
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 4.2e-48 195.3 180 58.9
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 4.2e-48 195.3 116 89.7
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 7.1e-48 194.5 185 58.4
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 7.9e-47 191.0 178 60.7
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.3e-46 190.3 187 58.3
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 2.3e-46 189.5 182 58.2
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 6.7e-46 188.0 186 60.2
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 1.3e-44 183.7 186 57.5
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.2e-42 177.2 184 54.9
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 3.4e-42 175.6 175 56.0
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 3.8e-41 172.2 184 54.9
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.4e-40 170.2 184 50.0
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-39 167.2 175 53.7
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 2.1e-39 166.4 182 58.8
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 3.5e-39 165.6 175 53.1
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 3.5e-39 165.6 175 53.1
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.3e-38 163.7 134 67.9
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 7.4e-37 157.9 179 48.0
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 4.1e-35 152.1 175 52.0
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.7e-31 139.4 176 47.2
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.3e-30 136.3 176 46.6
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 8.7e-30 134.4 178 46.6
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.8e-28 129.4 175 44.6
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 5.3e-27 125.2 175 41.7
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 6.9e-27 124.8 175 42.3
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 1.3e-25 120.6 62 95.2
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.5e-25 117.9 174 42.0
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.5e-25 117.9 174 42.0
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.5e-25 117.9 174 42.0
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 175 41.7
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-24 117.1 175 41.1
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 4.2e-24 115.5 62 91.9
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 7.2e-24 114.8 174 41.4
BcaNung00181 Brassica carinata HOM05D007475 ORTHO05D009529 3.9e-22 109.0 116 52.6
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-21 107.1 174 38.5
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 4.3e-21 105.5 132 50.0
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.3e-20 101.7 174 37.4
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 3.4e-18 95.9 75 65.3
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 2.5e-16 89.7 100 49.0
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.6e-15 85.9 134 38.1
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 1.1e-13 80.9 174 32.8
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 4.4e-13 79.0 172 32.6
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 2.4e-11 73.2 174 30.5
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 3.1e-11 72.8 174 30.5
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 9.1e-11 71.2 174 29.9
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 7.7e-10 68.2 174 32.2
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 1.0e-09 67.8 185 28.6
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 2.9e-09 66.2 173 30.6
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 6.5e-09 65.1 171 28.1
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 8.0e-07 58.2 163 29.4
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 3.0e-06 56.2 167 29.9
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 8.8e-06 54.7 135 32.6


User provided reference genes

Program Settings