Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p23080 Brassica napus HOM05D004902 ORTHO05D006603 0.0e+00 1164.4 587 100.0
BolC1t02242H Brassica oleracea HOM05D004902 ORTHO05D006603 0.0e+00 1149.8 589 98.8
C04p45770 Brassica napus HOM05D004902 ORTHO05D006603 0.0e+00 1102.4 587 95.4
BcaB06g27301 Brassica carinata HOM05D004902 ORTHO05D006603 0.0e+00 1095.1 587 94.7
BolC4t26162H Brassica oleracea HOM05D004902 ORTHO05D006603 0.0e+00 1094.7 589 94.9
Sp7g24850 Schrenkiella parvula HOM05D004902 ORTHO05D006603 0.0e+00 1082.4 592 93.1
CARHR234510 Cardamine hirsuta HOM05D004902 ORTHO05D006603 0.0e+00 1080.9 595 91.8
BcaNung03568 Brassica carinata HOM05D004902 ORTHO05D006603 0.0e+00 1079.3 589 93.9
A04p12110 Brassica napus HOM05D004902 ORTHO05D006603 4.0e-312 1074.3 590 93.9
AL7G25950 Arabidopsis lyrata HOM05D004902 ORTHO05D006603 1.6e-311 1072.0 594 91.6
Thhalv10024744m.g Eutrema salsugineum HOM05D004902 ORTHO05D006603 2.0e-311 1071.6 591 91.9
AT4G26900 Arabidopsis thaliana HOM05D004902 ORTHO05D006603 1.0e-310 1069.3 594 91.4
Carub.0007s1395 Capsella rubella HOM05D004902 ORTHO05D006603 4.4e-309 1063.9 589 91.9
BraA04t16876Z Brassica rapa HOM05D004902 ORTHO05D006603 2.5e-304 1048.1 618 89.8
Aa31LG3G11010 Aethionema arabicum HOM05D004902 ORTHO05D006603 5.7e-301 1036.9 593 88.4
THA.LOC104811618 Tarenaya hassleriana HOM05D004902 ORTHO05D006603 3.1e-294 1014.6 587 87.2
TWI39G0824 Tripterygium wilfordii HOM05D004902 ORTHO05D006603 9.5e-280 966.5 581 82.4
MELO3C013152.2 Cucumis melo HOM05D004902 ORTHO05D006603 3.4e-277 958.0 570 82.8
GSVIVG01037683001 Vitis vinifera HOM05D004902 ORTHO05D006603 1.3e-276 956.1 579 81.9
Ca_14752_v3 Cicer arietinum L. HOM05D004902 ORTHO05D006603 1.7e-276 955.7 572 83.2
Manes.03G132000 Manihot esculenta HOM05D004902 ORTHO05D006603 3.7e-276 954.5 586 81.7
MD03G1198000 Malus domestica HOM05D004902 ORTHO05D006603 8.3e-276 953.4 582 81.4
Prupe.4G217200 Prunus persica HOM05D004902 ORTHO05D006603 1.9e-275 952.2 582 81.4
Gorai.007G076800 Gossypium raimondii HOM05D004902 ORTHO05D006603 2.4e-275 951.8 589 80.6
Eucgr.F00742 Eucalyptus grandis HOM05D004902 ORTHO05D006603 3.2e-275 951.4 589 80.5
Gohir.A11G067600 Gossypium hirsutum HOM05D004902 ORTHO05D006603 3.2e-275 951.4 590 80.8
ClCG09G010930 Citrullus lanatus HOM05D004902 ORTHO05D006603 4.1e-275 951.0 570 82.1
Gohir.D11G071500 Gossypium hirsutum HOM05D004902 ORTHO05D006603 7.1e-275 950.3 590 80.7
Potri.001G267400 Populus trichocarpa HOM05D004902 ORTHO05D006603 2.1e-274 948.7 592 81.4
Sopen07g033000 Solanum pennellii HOM05D004902 ORTHO05D006603 2.1e-274 948.7 589 80.8
Psat5g177120 Pisum sativum HOM05D004902 ORTHO05D006603 6.0e-274 947.2 573 82.2
PGSC0003DMG400022211 Solanum tuberosum HOM05D004902 ORTHO05D006603 6.0e-274 947.2 589 80.6
Atru.chr2.3483 Acer truncatum HOM05D004902 ORTHO05D006603 1.3e-273 946.0 587 81.8
Solyc07g064810.3 Solanum lycopersicum HOM05D004902 ORTHO05D006603 1.3e-273 946.0 589 80.6
Glyma.18G093200 Glycine max HOM05D004902 ORTHO05D006603 1.7e-273 945.7 572 82.5
Potri.009G061700 Populus trichocarpa HOM05D004902 ORTHO05D006603 5.1e-273 944.1 585 80.7
TPR.G33794 Trifolium pratense HOM05D004902 ORTHO05D006603 1.1e-272 943.0 570 81.1
Cfa020314 Carpinus fangiana HOM05D004902 ORTHO05D006603 3.3e-272 941.4 591 80.2
Medtr3g052850 Medicago truncatula HOM05D004902 ORTHO05D006603 3.3e-272 941.4 575 81.2
Ciclev10007818m.g Citrus clementina HOM05D004902 ORTHO05D006603 4.3e-272 941.0 591 80.4
SGA_v2.0_scaffold172G39008 Striga asiatica HOM05D004902 ORTHO05D006603 4.3e-272 941.0 578 82.2
Glyma.18G108300 Glycine max HOM05D004902 ORTHO05D006603 5.6e-272 940.6 573 82.0
Lalb_Chr10g0107081 Lupinus albus HOM05D004902 ORTHO05D006603 5.6e-272 940.6 562 82.9
Dinv40776 Davidia involucrata HOM05D004902 ORTHO05D006603 7.3e-272 940.3 594 79.3
Lj4g0024994 Lotus japonicus HOM05D004902 ORTHO05D006603 7.3e-272 940.3 547 84.1
CiPaw.11G191900 Carya illinoinensis HOM05D004902 ORTHO05D006603 1.6e-271 939.1 590 79.3
CANSAT11G1621 Cannabis sativa HOM05D004902 ORTHO05D006603 2.1e-271 938.7 585 80.5
Phvul.006G046400 Phaseolus vulgaris HOM05D004902 ORTHO05D006603 2.1e-271 938.7 572 82.2
Sed0009199 Sechium edule HOM05D004902 ORTHO05D006603 2.1e-271 938.7 589 79.5
MSTRG.12985 Avicennia marina HOM05D004902 ORTHO05D006603 4.7e-271 937.6 550 83.8
QL08p009339 Quercus lobata HOM05D004902 ORTHO05D006603 3.1e-270 934.9 597 78.7
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 4.0e-270 934.5 576 80.7
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea HOM05D004902 ORTHO05D006603 1.2e-269 932.9 571 81.8
Lj1A876G36 Lonicera japonica HOM05D004902 ORTHO05D006603 2.0e-269 932.2 604 78.3
RcHm_v2.0_Chr5g0040671 Rosa chinensis HOM05D004902 ORTHO05D006603 2.6e-269 931.8 580 80.7
CSS0007833 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 2.9e-268 928.3 560 81.8
CAN.G337.72 Capsicum annuum HOM05D004902 ORTHO05D006603 3.8e-268 927.9 558 82.4
CSS0000094 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 4.9e-268 927.5 560 81.8
TAR362G0117 Trochodendron aralioides HOM05D004902 ORTHO05D006603 1.1e-267 926.4 583 79.2
FAN18G4155 Fragaria x ananassa HOM05D004902 ORTHO05D006603 2.4e-267 925.2 574 80.8
MSTRG.14441 Avicennia marina HOM05D004902 ORTHO05D006603 3.2e-267 924.9 548 83.0
PGR083G1168 Punica granatum HOM05D004902 ORTHO05D006603 3.2e-267 924.9 587 80.1
Sc02g0003710 Simmondsia chinensis HOM05D004902 ORTHO05D006603 4.2e-267 924.5 587 79.0
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea HOM05D004902 ORTHO05D006603 7.1e-267 923.7 588 79.6
Migut.M01740 Erythranthe guttata HOM05D004902 ORTHO05D006603 2.1e-266 922.2 552 81.7
Duzib264G0382 Durio zibethinus HOM05D004902 ORTHO05D006603 3.5e-266 921.4 592 79.6
Oeu062577.2 Olea europaea HOM05D004902 ORTHO05D006603 3.5e-266 921.4 609 77.8
Lsat_1_v5_gn_5_3021 Lactuca sativa HOM05D004902 ORTHO05D006603 1.0e-265 919.8 571 79.7
FAN04G1963 Fragaria x ananassa HOM05D004902 ORTHO05D006603 1.3e-265 919.5 584 79.8
HanXRQChr08g0233501 Helianthus annuus HOM05D004902 ORTHO05D006603 1.7e-265 919.1 574 80.7
HanXRQChr05g0159411 Helianthus annuus HOM05D004902 ORTHO05D006603 3.9e-265 917.9 558 81.5
Thecc.09G123200 Theobroma cacao HOM05D004902 ORTHO05D006603 1.5e-264 916.0 566 80.7
FAN13G3021 Fragaria x ananassa HOM05D004902 ORTHO05D006603 2.5e-264 915.2 588 78.7
Hund26666 Selenicereus undatus HOM05D004902 ORTHO05D006603 9.6e-264 913.3 578 78.4
Aqoxy5G00324 Aquilegia oxysepala HOM05D004902 ORTHO05D006603 3.6e-263 911.4 572 79.5
CDE02G3624 Ceratophyllum demersum HOM05D004902 ORTHO05D006603 9.0e-262 906.7 580 77.4
Actinidia10742 Actinidia chinensis HOM05D004902 ORTHO05D006603 2.0e-261 905.6 615 75.1
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 1.7e-260 902.5 553 80.8
COL.COLO4_19537 Corchorus olitorius HOM05D004902 ORTHO05D006603 5.4e-259 897.5 580 78.4
EL10Ac1g01638 Beta vulgaris HOM05D004902 ORTHO05D006603 6.0e-258 894.0 590 75.1
Nn8g38868 Nelumbo nucifera HOM05D004902 ORTHO05D006603 1.5e-256 889.4 568 77.6
ATR0736G184 Amborella trichopoda HOM05D004902 ORTHO05D006603 3.3e-256 888.3 589 76.9
AUR62026758 Chenopodium quinoa HOM05D004902 ORTHO05D006603 1.1e-254 883.2 589 75.2
HPP92_013494 Vanilla planifolia HOM05D004902 ORTHO05D006603 2.6e-253 878.6 544 78.1
Haze_09705 Corylus avellana HOM05D004902 ORTHO05D006603 7.6e-253 877.1 585 75.7
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 3.2e-251 871.7 534 79.0
Oeu013136.2 Olea europaea HOM05D004902 ORTHO05D006603 1.0e-249 866.7 607 74.0
Rhsim06G0219700 Rhododendron simsii HOM05D004902 ORTHO05D006603 8.7e-249 863.6 585 74.5
Gorai.011G209600 Gossypium raimondii HOM05D004902 ORTHO05D006603 1.1e-248 863.2 588 75.3
Sabra16G0163900 Salix brachista HOM05D004902 ORTHO05D006603 2.8e-247 858.6 651 70.0
FAN08G0007 Fragaria x ananassa HOM05D004902 ORTHO05D006603 6.2e-247 857.4 574 76.5
Gohir.D10G186800 Gossypium hirsutum HOM05D004902 ORTHO05D006603 1.1e-246 856.7 588 74.8
Os03g0256400 Oryza sativa ssp. japonica HOM05D004902 ORTHO05D006603 7.6e-245 850.5 543 76.8
PSO832G3378 Papaver somniferum HOM05D004902 ORTHO05D006603 1.3e-239 833.2 571 75.0
vmacro02220 Vaccinium macrocarpon HOM05D004902 ORTHO05D006603 1.3e-239 833.2 591 72.9
PSO210G2842 Papaver somniferum HOM05D004902 ORTHO05D006603 1.6e-239 832.8 571 74.8
FvH4_5g29730 Fragaria vesca HOM05D004902 ORTHO05D006603 8.2e-239 830.5 479 84.3
CsaV3_7G021940 Cucumis sativus L. HOM05D004902 ORTHO05D006603 1.8e-238 829.3 516 79.5
Gohir.A10G179900 Gossypium hirsutum HOM05D004902 ORTHO05D006603 3.1e-238 828.6 605 72.7
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis HOM05D004902 ORTHO05D006603 1.3e-236 823.2 550 73.5
Peaxi162Scf00235g00424 Petunia axillaris HOM05D004902 ORTHO05D006603 5.0e-236 821.2 576 73.4
Ah.13g076200 Amaranthus hybridus HOM05D004902 ORTHO05D006603 5.5e-235 817.8 590 72.2
Mapoly0071s0086 Marchantia polymorpha HOM05D004902 ORTHO05D006603 8.5e-228 793.9 576 68.6
CBR_g4356 Chara braunii HOM05D004902 ORTHO05D006603 5.5e-227 791.2 542 72.1
DCAR_022578 Daucus carota HOM05D004902 ORTHO05D006603 7.9e-226 787.3 565 71.7
Pp3c1_20280 Physcomitrium patens HOM05D004902 ORTHO05D006603 6.7e-225 784.3 585 68.5
Nitab4.5_0022774g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 5.7e-224 781.2 463 82.1
SMO119G0352 Selaginella moellendorffii HOM05D004902 ORTHO05D006603 1.0e-220 770.4 532 71.6
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 1.1e-214 750.4 467 79.0
AUR62013514 Chenopodium quinoa HOM05D004902 ORTHO05D006603 1.2e-205 720.3 562 66.5
unitig_85.g27329 Utricularia gibba HOM05D004902 ORTHO05D006603 1.1e-203 713.8 558 67.2
A01p18110 Brassica napus HOM05D004902 ORTHO05D006603 5.9e-189 664.8 554 67.5
CAN.G677.16 Capsicum annuum HOM05D004902 ORTHO05D006603 5.0e-188 661.8 551 65.0
Nitab4.5_0013139g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 1.1e-187 660.6 405 81.7
MCO02G311 Micromonas commoda HOM05D004902 ORTHO05D006603 5.6e-187 658.3 549 60.8
MD11G1214000 Malus domestica HOM05D004902 ORTHO05D006603 9.5e-163 577.8 341 85.0
HanXRQChr08g0233821 Helianthus annuus HOM05D004902 ORTHO05D006603 2.1e-162 576.6 406 74.1
PRCOL_00006765 Prasinoderma coloniale HOM05D004902 ORTHO05D006603 1.1e-161 574.3 510 58.2
Zm00001eb011150 Zea mays HOM05D004902 ORTHO05D006603 2.7e-157 559.7 356 79.2
Cfa025092 Carpinus fangiana HOM05D004902 ORTHO05D006603 4.6e-157 558.9 547 54.1
Cre11.g481500 Chlamydomonas reinhardtii HOM05D004902 ORTHO05D006603 1.9e-134 483.8 561 48.1
Cpa.g.sc12.277 Carica papaya HOM05D004902 ORTHO05D006603 1.4e-126 457.6 257 87.2
Cpa.g.c34168 Carica papaya HOM05D004902 ORTHO05D006603 8.5e-103 378.6 225 82.2
MD11G1213900 Malus domestica HOM05D004902 ORTHO05D006603 4.1e-89 333.2 188 80.9
Lsat_1_v5_gn_3_2301 Lactuca sativa HOM05D004902 ORTHO05D006603 1.5e-70 271.6 392 44.9
Glyma.08G323300 Glycine max HOM05D004902 ORTHO05D006603 2.6e-67 260.8 208 63.0
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 1.5e-54 218.4 198 56.1
BraA01t01766Z Brassica rapa HOM05D004902 ORTHO05D006603 3.6e-45 187.2 102 90.2
SEGI_16435 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 1.2e-43 182.2 116 79.3
VMungo0540G1125 Vigna mungo HOM05D004902 ORTHO05D006603 1.5e-43 181.8 140 70.7
RcHm_v2.0_Chr4g0412471 Rosa chinensis HOM05D004902 ORTHO05D006603 7.6e-43 179.5 153 65.4
SEGI_31768 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 8.1e-37 159.5 118 61.9
BcaNung03565 Brassica carinata HOM05D004902 ORTHO05D006603 2.8e-29 134.4 87 88.5
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 8.1e-29 132.9 314 32.2
Lsat_1_v5_gn_0_44000 Lactuca sativa HOM05D004902 ORTHO05D038539 3.8e-26 124.0 312 33.3
Glyma.08G319400 Glycine max HOM05D004902 ORTHO05D029739 6.4e-26 123.2 73 83.6
BcaNung03560 Brassica carinata HOM05D004902 ORTHO05D006603 9.6e-22 109.4 84 69.0
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 1.1e-17 95.9 58 82.8
Ah.01g018890 Amaranthus hybridus HOM05D004902 ORTHO05D006603 3.9e-15 87.4 121 46.3
TPR.G39977 Trifolium pratense HOM05D004902 ORTHO05D006603 1.3e-13 82.4 43 83.7
SEGI_35364 Sequoiadendron giganteum HOM05D004902 ORTHO05D025756 5.3e-12 77.0 46 67.4
Lsat_1_v5_gn_3_69341 Lactuca sativa HOM05D004902 ORTHO05D006603 3.4e-11 74.3 126 38.9
Lsat_1_v5_gn_4_11281 Lactuca sativa HOM05D004902 ORTHO05D006603 4.5e-11 73.9 107 43.0
HanXRQChr08g0233831 Helianthus annuus HOM05D004902 ORTHO05D006603 1.6e-08 65.5 42 73.8
GSVIVG01021644001 Vitis vinifera HOM05D004902 ORTHO05D024725 2.1e-08 65.1 36 75.0
TWI38G0888 Tripterygium wilfordii HOM05D004902 ORTHO05D029739 1.8e-07 62.0 52 67.3
RcHm_v2.0_Chr5g0040621 Rosa chinensis HOM05D004902 ORTHO05D006603 2.3e-07 61.6 37 81.1
Lsat_1_v5_gn_0_720 Lactuca sativa HOM05D004902 ORTHO05D029739 5.7e-06 57.0 55 56.4


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