Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p21620 Brassica napus HOM05D004172 ORTHO05D023965 1.7e-35 152.1 79 100.0
BolC4t24562H Brassica oleracea HOM05D004172 ORTHO05D023965 1.5e-34 149.1 79 97.5
C04p30290 Brassica napus HOM05D004172 ORTHO05D023965 7.3e-34 146.7 79 96.2
BcaC01g04188 Brassica carinata HOM05D004172 ORTHO05D006010 3.0e-27 124.8 70 95.7
BolC3t16675H Brassica oleracea HOM05D004172 ORTHO05D006010 3.0e-27 124.8 70 95.7
A03p36430 Brassica napus HOM05D004172 ORTHO05D006010 1.1e-26 122.9 70 94.3
BraA03t12811Z Brassica rapa HOM05D004172 ORTHO05D006010 1.1e-26 122.9 70 94.3
BcaC09g47981 Brassica carinata HOM05D004172 ORTHO05D006010 7.3e-26 120.2 70 92.9
BolC1t05497H Brassica oleracea HOM05D004172 ORTHO05D006010 7.3e-26 120.2 70 92.9
Carub.0003s0778 Capsella rubella HOM05D004172 ORTHO05D006010 1.6e-25 119.0 70 91.4
BcaB04g21247 Brassica carinata HOM05D004172 ORTHO05D006010 1.1e-24 116.3 70 90.0
BraA01t04334Z Brassica rapa HOM05D004172 ORTHO05D006010 2.4e-24 115.2 70 88.6
AT3G08650 Arabidopsis thaliana HOM05D004172 ORTHO05D006010 3.1e-24 114.8 70 90.0
AL3G19650 Arabidopsis lyrata HOM05D004172 ORTHO05D006010 5.2e-24 114.0 70 88.6
BcaC09g50722 Brassica carinata HOM05D004172 ORTHO05D023965 9.0e-24 113.2 72 86.1
Sp3g07090 Schrenkiella parvula HOM05D004172 ORTHO05D006010 1.2e-23 112.8 70 87.1
CARHR082950 Cardamine hirsuta HOM05D004172 ORTHO05D006010 1.5e-23 112.5 70 85.7
BcaC02g10326 Brassica carinata HOM05D004172 ORTHO05D023965 7.6e-23 110.2 72 83.3
C05p59200 Brassica napus HOM05D004172 ORTHO05D006010 7.6e-23 110.2 70 85.7
Thhalv10020349m.g Eutrema salsugineum HOM05D004172 ORTHO05D006010 7.6e-23 110.2 70 84.3
A05p40120 Brassica napus HOM05D004172 ORTHO05D006010 9.9e-23 109.8 70 84.3
BNapus_Darmor_BZH_scaffold_167p00070 Brassica napus HOM05D004172 ORTHO05D006010 3.8e-22 107.8 70 87.1
BolC5t34577H Brassica oleracea HOM05D004172 ORTHO05D006010 3.8e-22 107.8 70 84.3
Aa31LG5G18700 Aethionema arabicum HOM05D004172 ORTHO05D006010 1.3e-19 99.4 70 75.7
BcaC05g29600 Brassica carinata HOM05D004172 ORTHO05D006010 4.0e-16 87.8 70 72.9
C03p44050 Brassica napus HOM05D004172 ORTHO05D006010 5.8e-15 84.0 46 95.7
THA.LOC104823330 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 5.8e-15 84.0 70 70.0
FAN02G3863 Fragaria x ananassa HOM05D004172 ORTHO05D006010 2.9e-14 81.6 74 62.2
FvH4_6g09450 Fragaria vesca HOM05D004172 ORTHO05D006010 1.4e-13 79.3 74 60.8
FAN14G3054 Fragaria x ananassa HOM05D004172 ORTHO05D006010 1.4e-13 79.3 74 60.8
Eucgr.K01297 Eucalyptus grandis HOM05D004172 ORTHO05D006010 1.9e-13 79.0 72 58.3
FAN09G2297 Fragaria x ananassa HOM05D004172 ORTHO05D006010 3.2e-13 78.2 74 60.8
Haze_21203 Corylus avellana HOM05D004172 ORTHO05D006010 5.4e-13 77.4 74 56.8
Ca_07790_v3 Cicer arietinum L. HOM05D004172 ORTHO05D006010 1.6e-12 75.9 74 54.1
Manes.08G168300 Manihot esculenta HOM05D004172 ORTHO05D006010 1.6e-12 75.9 74 54.1
Phvul.010G059200 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 1.6e-12 75.9 72 55.6
Cfa017003 Carpinus fangiana HOM05D004172 ORTHO05D006010 2.1e-12 75.5 74 55.4
Manes.09G122000 Manihot esculenta HOM05D004172 ORTHO05D006010 2.1e-12 75.5 74 56.8
RcHm_v2.0_Chr3g0459921 Rosa chinensis HOM05D004172 ORTHO05D006010 2.1e-12 75.5 74 56.8
CsaV3_4G027360 Cucumis sativus L. HOM05D004172 ORTHO05D006010 2.7e-12 75.1 74 52.7
CANSAT55G0003 Cannabis sativa HOM05D004172 ORTHO05D006010 3.5e-12 74.7 74 59.5
Ciclev10011331m.g Citrus clementina HOM05D004172 ORTHO05D006010 3.5e-12 74.7 72 61.1
Gohir.D02G002100 Gossypium hirsutum HOM05D004172 ORTHO05D006010 3.5e-12 74.7 72 56.9
Gorai.005G002600 Gossypium raimondii HOM05D004172 ORTHO05D006010 3.5e-12 74.7 72 56.9
Solyc01g087530.3 Solanum lycopersicum HOM05D004172 ORTHO05D006010 3.5e-12 74.7 71 56.3
Sopen01g034500 Solanum pennellii HOM05D004172 ORTHO05D006010 3.5e-12 74.7 71 56.3
PGSC0003DMG400006857 Solanum tuberosum HOM05D004172 ORTHO05D006010 3.5e-12 74.7 71 56.3
Nitab4.5_0000707g0290 Nicotiana tabacum HOM05D004172 ORTHO05D006010 4.6e-12 74.3 71 56.3
MELO3C025255.2 Cucumis melo HOM05D004172 ORTHO05D006010 6.0e-12 73.9 74 52.7
Sed0001307 Sechium edule HOM05D004172 ORTHO05D006010 7.9e-12 73.6 74 51.4
Atru.chr8.66 Acer truncatum HOM05D004172 ORTHO05D006010 1.0e-11 73.2 72 58.3
Gohir.A10G152400 Gossypium hirsutum HOM05D004172 ORTHO05D006010 1.0e-11 73.2 72 55.6
Psat3g117200 Pisum sativum HOM05D004172 ORTHO05D006010 1.0e-11 73.2 74 54.1
VMungo0331G1250 Vigna mungo HOM05D004172 ORTHO05D006010 1.0e-11 73.2 72 52.8
CiPaw.10G166300 Carya illinoinensis HOM05D004172 ORTHO05D006010 1.3e-11 72.8 74 54.1
Nitab4.5_0006228g0020 Nicotiana tabacum HOM05D004172 ORTHO05D006010 1.3e-11 72.8 71 56.3
Medtr7g074060 Medicago truncatula HOM05D004172 ORTHO05D006010 1.8e-11 72.4 74 52.7
Sabra04G0157100 Salix brachista HOM05D004172 ORTHO05D006010 1.8e-11 72.4 74 54.1
Sabra06G0086400 Salix brachista HOM05D004172 ORTHO05D006010 1.8e-11 72.4 74 52.7
Actinidia32576 Actinidia chinensis HOM05D004172 ORTHO05D006010 3.0e-11 71.6 71 54.9
arahy.Tifrunner.gnm1.ann1.3N9KBA Arachis hypogaea HOM05D004172 ORTHO05D006010 3.0e-11 71.6 74 51.4
Gohir.A02G001800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 3.0e-11 71.6 72 54.2
Peaxi162Scf00019g00011 Petunia axillaris HOM05D004172 ORTHO05D006010 3.0e-11 71.6 71 53.5
TPR.G24292 Trifolium pratense HOM05D004172 ORTHO05D006010 3.0e-11 71.6 74 52.7
TWI53G0780 Tripterygium wilfordii HOM05D004172 ORTHO05D006010 3.0e-11 71.6 73 53.4
Dinv21399 Davidia involucrata HOM05D004172 ORTHO05D006010 3.9e-11 71.2 71 56.3
Gohir.D10G113800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 3.9e-11 71.2 72 54.2
Gorai.011G125600 Gossypium raimondii HOM05D004172 ORTHO05D006010 3.9e-11 71.2 72 54.2
Lj1g0013582 Lotus japonicus HOM05D004172 ORTHO05D006010 3.9e-11 71.2 74 51.4
Rhsim04G0120600 Rhododendron simsii HOM05D004172 ORTHO05D006010 5.1e-11 70.9 71 56.3
CAN.G219.48 Capsicum annuum HOM05D004172 ORTHO05D006010 6.7e-11 70.5 71 53.5
ClCG04G006210 Citrullus lanatus HOM05D004172 ORTHO05D006010 6.7e-11 70.5 74 50.0
Dinv16944 Davidia involucrata HOM05D004172 ORTHO05D006010 6.7e-11 70.5 71 54.9
Sc20g0007210 Simmondsia chinensis HOM05D004172 ORTHO05D006010 6.7e-11 70.5 71 56.3
arahy.Tifrunner.gnm1.ann1.5JF3JJ Arachis hypogaea HOM05D004172 ORTHO05D006010 8.7e-11 70.1 74 50.0
arahy.Tifrunner.gnm1.ann1.SQ7DBT Arachis hypogaea HOM05D004172 ORTHO05D006010 8.7e-11 70.1 74 50.0
Prupe.6G297500 Prunus persica HOM05D004172 ORTHO05D006010 8.7e-11 70.1 74 51.4
arahy.Tifrunner.gnm1.ann1.VH0VRX Arachis hypogaea HOM05D004172 ORTHO05D006010 1.1e-10 69.7 74 50.0
MD04G1177600 Malus domestica HOM05D004172 ORTHO05D006010 1.1e-10 69.7 74 55.4
QL07p031617 Quercus lobata HOM05D004172 ORTHO05D006010 1.1e-10 69.7 74 52.7
Thecc.04G148100 Theobroma cacao HOM05D004172 ORTHO05D006010 1.5e-10 69.3 72 52.8
Hma1.2p1_0106F.1_g051180 Hydrangea macrophylla HOM05D004172 ORTHO05D006010 2.5e-10 68.6 71 50.7
MD12G1192900 Malus domestica HOM05D004172 ORTHO05D006010 2.5e-10 68.6 74 52.7
QL07p031284 Quercus lobata HOM05D004172 ORTHO05D006010 2.5e-10 68.6 74 52.7
Ah.15g089820 Amaranthus hybridus HOM05D004172 ORTHO05D006010 3.3e-10 68.2 63 50.8
AUR62029801 Chenopodium quinoa HOM05D004172 ORTHO05D006010 3.3e-10 68.2 61 54.1
Lj7P587T8 Lonicera japonica HOM05D004172 ORTHO05D006010 3.3e-10 68.2 71 47.9
EL10Ac7g17137 Beta vulgaris HOM05D004172 ORTHO05D006010 4.3e-10 67.8 61 55.7
CSS0013897 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 4.3e-10 67.8 71 50.7
Actinidia20804 Actinidia chinensis HOM05D004172 ORTHO05D006010 5.6e-10 67.4 71 53.5
Actinidia28546 Actinidia chinensis HOM05D004172 ORTHO05D006010 5.6e-10 67.4 71 53.5
DCAR_029461 Daucus carota HOM05D004172 ORTHO05D006010 1.3e-09 66.2 61 57.4
Glyma.18G217100 Glycine max HOM05D004172 ORTHO05D006010 1.6e-09 65.9 74 48.6
SHI12946 Sapria himalayana HOM05D004172 ORTHO05D006010 1.6e-09 65.9 60 61.7
MSTRG.5032 Avicennia marina HOM05D004172 ORTHO05D006010 2.8e-09 65.1 71 50.7
AUR62006448 Chenopodium quinoa HOM05D004172 ORTHO05D006010 2.8e-09 65.1 58 55.2
Phvul.008G079500 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 2.8e-09 65.1 74 47.3
THA.LOC104806653 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 2.8e-09 65.1 72 51.4
vmacro08954 Vaccinium macrocarpon HOM05D004172 ORTHO05D006010 2.8e-09 65.1 71 53.5
VMungo1383G2431 Vigna mungo HOM05D004172 ORTHO05D006010 2.8e-09 65.1 74 47.3
Duzib151G0210 Durio zibethinus HOM05D004172 ORTHO05D006010 4.8e-09 64.3 62 54.8
Glyma.09G271900 Glycine max HOM05D004172 ORTHO05D006010 4.8e-09 64.3 74 47.3
Potri.006G111200 Populus trichocarpa HOM05D004172 ORTHO05D006010 4.8e-09 64.3 74 48.6
PGR004G2490 Punica granatum HOM05D004172 ORTHO05D006010 4.8e-09 64.3 72 50.0
HanXRQChr01g0016071 Helianthus annuus HOM05D004172 ORTHO05D006010 6.2e-09 63.9 61 55.7
Lalb_Chr01g0023931 Lupinus albus HOM05D004172 ORTHO05D006010 8.1e-09 63.5 74 45.9
CSS0016172 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 1.8e-08 62.4 71 50.7
Cc02_g28240 Coffea canephora HOM05D004172 ORTHO05D006010 1.8e-08 62.4 61 50.8
ECA248G2273 Erigeron canadensis HOM05D004172 ORTHO05D006010 1.8e-08 62.4 61 52.5
Lalb_Chr07g0195761 Lupinus albus HOM05D004172 ORTHO05D006010 3.1e-08 61.6 74 47.3
Cpa.g.sc0.76 Carica papaya HOM05D004172 ORTHO05D006010 5.3e-08 60.8 72 47.2
TAR633G1329 Trochodendron aralioides HOM05D004172 ORTHO05D006010 6.9e-08 60.5 61 52.5
unitig_747.g21293 Utricularia gibba HOM05D004172 ORTHO05D006010 6.9e-08 60.5 68 51.5
Aqoxy4G03306 Aquilegia oxysepala HOM05D004172 ORTHO05D006010 9.0e-08 60.1 61 54.1
Hund03687 Selenicereus undatus HOM05D004172 ORTHO05D006010 9.0e-08 60.1 56 51.8
Oeu006559.1 Olea europaea HOM05D004172 ORTHO05D006010 1.2e-07 59.7 61 55.7
GSVIVG01029868001 Vitis vinifera HOM05D004172 ORTHO05D006010 1.2e-07 59.7 60 53.3
SalBow6G2214 Salvia bowleyana HOM05D004172 ORTHO05D006010 1.5e-07 59.3 63 50.8
Oeu049006.1 Olea europaea HOM05D004172 ORTHO05D006010 2.6e-07 58.5 61 52.5
Nn5g26794 Nelumbo nucifera HOM05D004172 ORTHO05D006010 4.5e-07 57.8 61 54.1
MBI15_g31039_MAGBIO Magnolia biondii HOM05D004172 ORTHO05D006010 1.3e-06 56.2 70 48.6
HPP92_026424 Vanilla planifolia HOM05D004172 ORTHO05D006010 1.3e-06 56.2 64 48.4
ATR1127G216 Amborella trichopoda HOM05D004172 ORTHO05D006010 2.2e-06 55.5 69 46.4
PSO170G1455 Papaver somniferum HOM05D004172 ORTHO05D006010 2.2e-06 55.5 63 46.0
PSO502G0022 Papaver somniferum HOM05D004172 ORTHO05D006010 2.2e-06 55.5 63 46.0
Lsat_1_v5_gn_1_105840 Lactuca sativa HOM05D004172 ORTHO05D006010 3.8e-06 54.7 61 44.3
PSO017G1041 Papaver somniferum HOM05D004172 ORTHO05D006010 4.9e-06 54.3 63 46.0
Potri.016G140500 Populus trichocarpa HOM05D004172 ORTHO05D006010 8.4e-06 53.5 57 50.9


User provided reference genes

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