Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 4.7e-137 491.1 236 100.0
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.9e-126 455.3 233 95.3
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 2.4e-125 452.2 234 94.0
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 2.4e-88 329.3 248 71.0
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 3.5e-55 219.2 174 69.5
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 3.5e-55 219.2 174 69.5
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 3.5e-55 219.2 174 69.5
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.7e-54 216.9 174 69.0
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 2.2e-54 216.5 174 69.0
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.2e-54 216.5 174 69.0
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.1e-53 214.2 174 67.8
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 7.2e-53 211.5 174 66.7
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 9.4e-53 211.1 174 66.7
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.2e-52 210.7 174 66.7
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.8e-51 206.8 174 65.5
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 9.8e-50 201.1 174 63.8
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.1e-48 197.6 168 65.5
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.2e-45 186.0 172 57.6
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 4.7e-44 182.2 221 47.5
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 4.7e-44 182.2 221 47.5
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 8.0e-44 181.4 174 54.0
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 1.0e-43 181.0 172 55.2
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.8e-43 180.3 174 53.4
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.8e-43 180.3 172 55.8
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 5.2e-43 178.7 166 56.6
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 8.8e-43 177.9 169 56.8
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 8.8e-43 177.9 204 48.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.5e-42 177.2 168 55.4
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.5e-42 177.2 174 55.7
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.0e-42 176.8 166 56.6
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 2.0e-42 176.8 166 56.0
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 2.0e-42 176.8 166 55.4
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 2.6e-42 176.4 168 56.5
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 3.4e-42 176.0 171 54.4
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 3.4e-42 176.0 165 57.6
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 4.4e-42 175.6 166 55.4
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 9.8e-42 174.5 165 56.4
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 9.8e-42 174.5 169 55.6
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 2.2e-41 173.3 166 56.0
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 2.8e-41 172.9 166 56.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 2.8e-41 172.9 166 54.2
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 4.9e-41 172.2 161 57.8
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 4.9e-41 172.2 161 57.8
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 4.9e-41 172.2 166 53.0
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 6.3e-41 171.8 168 54.2
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 8.3e-41 171.4 169 51.5
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.3e-41 171.4 170 51.2
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.1e-40 171.0 170 51.2
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-40 171.0 170 51.2
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.4e-40 170.6 170 52.4
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.8e-40 170.2 171 53.2
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.8e-40 170.2 164 55.5
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 2.4e-40 169.9 166 54.8
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.1e-40 169.5 169 50.9
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 7.0e-40 168.3 168 51.8
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 7.0e-40 168.3 211 47.4
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 9.1e-40 167.9 166 54.2
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 9.1e-40 167.9 167 53.3
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 9.1e-40 167.9 169 55.0
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.2e-39 167.5 166 53.0
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.6e-39 167.2 165 56.4
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.6e-39 167.2 164 54.3
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.5e-39 166.0 172 53.5
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 5.9e-39 165.2 168 51.8
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.0e-38 164.5 166 52.4
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 1.3e-38 164.1 154 57.1
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.7e-38 163.7 163 52.8
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 8.6e-38 161.4 166 51.2
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 8.6e-38 161.4 163 52.1
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.3e-37 159.1 187 46.5
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 5.6e-37 158.7 165 51.5
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 7.2e-37 158.3 165 51.5
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 9.5e-37 157.9 146 57.5
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 2.1e-36 156.8 164 50.6
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 2.1e-36 156.8 169 47.9
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 6.1e-36 155.2 168 48.8
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 8.0e-36 154.8 185 49.2
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.3e-35 153.3 205 42.4
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 3.0e-35 152.9 164 48.2
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 3.0e-35 152.9 164 48.2
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 6.8e-35 151.8 165 47.3
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 8.9e-35 151.4 166 46.4
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.2e-34 151.0 164 47.6
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.2e-34 151.0 161 51.6
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 1.5e-34 150.6 225 41.3
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.5e-34 150.6 143 55.2
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.0e-34 150.2 176 49.4
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.4e-34 149.1 156 49.4
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.7e-33 147.1 172 47.1
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.2e-33 146.7 148 51.4
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 2.9e-33 146.4 161 49.7
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.8e-32 143.7 170 44.7
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 5.4e-32 142.1 162 45.7
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.0e-27 127.9 149 47.0
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 6.8e-27 125.2 132 51.5
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 4.4e-26 122.5 160 43.1
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 9.8e-26 121.3 165 43.0
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 4.9e-25 119.0 134 50.7
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 6.4e-25 118.6 148 45.3
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 3.2e-24 116.3 145 45.5
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.0e-24 115.2 138 44.2
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 2.7e-23 113.2 138 43.5
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 3.5e-23 112.8 154 42.2
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 6.0e-23 112.1 133 46.6
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 1.3e-22 110.9 165 38.2
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 1.1e-21 107.8 150 40.0
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.2e-20 104.4 79 62.0
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 4.7e-20 102.4 86 59.3
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 1.1e-19 101.3 176 38.6
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 1.5e-18 97.4 104 52.9
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.0e-18 97.1 65 69.2
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 1.3e-17 94.4 164 34.1
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 1.7e-17 94.0 42 90.5
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 4.1e-16 89.4 156 34.0
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 2.1e-15 87.0 45 86.7
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 2.1e-15 87.0 45 86.7
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.1e-15 87.0 204 29.4
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.7e-14 84.0 119 42.9
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.7e-09 67.4 135 34.8
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 1.7e-06 57.4 31 80.6


User provided reference genes

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