Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 1.2e-160 569.7 272 100.0
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 1.0e-159 566.6 271 99.3
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 1.0e-159 566.6 272 99.3
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 8.6e-159 563.5 272 98.9
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 1.5e-158 562.8 272 98.2
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 6.2e-157 557.4 272 97.1
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 9.6e-150 533.5 272 93.4
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 3.2e-137 491.9 271 86.3
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 1.6e-136 489.6 272 86.4
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 4.6e-136 488.0 272 86.0
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 2.3e-135 485.7 272 86.0
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 3.3e-134 481.9 272 84.6
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 1.1e-132 476.9 271 84.1
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 4.5e-131 471.5 270 83.3
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 1.3e-130 469.9 272 80.5
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 3.8e-130 468.4 272 80.5
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 8.4e-130 467.2 272 81.6
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 7.1e-129 464.2 270 79.3
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 3.5e-128 461.8 296 77.0
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 4.6e-128 461.5 272 78.3
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.5e-126 456.4 272 78.3
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 4.3e-126 454.9 267 78.7
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 2.1e-125 452.6 271 79.0
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 3.7e-125 451.8 272 77.9
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 3.7e-125 451.8 272 76.8
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 4.8e-125 451.4 269 78.8
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.4e-124 449.9 267 77.5
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 1.8e-124 449.5 275 81.5
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 3.1e-124 448.7 272 77.9
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 4.0e-124 448.4 266 75.9
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 6.9e-124 447.6 269 77.3
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 1.2e-123 446.8 263 79.1
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 1.2e-123 446.8 272 77.2
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 2.0e-123 446.0 272 79.8
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 2.6e-123 445.7 272 77.2
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 3.4e-123 445.3 269 75.8
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 4.5e-123 444.9 266 77.4
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 7.6e-123 444.1 261 77.8
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 1.0e-122 443.7 272 76.5
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 1.0e-122 443.7 266 75.9
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 1.3e-122 443.4 258 80.6
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.7e-122 443.0 269 76.6
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 1.7e-122 443.0 272 75.4
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.2e-122 442.6 256 78.9
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.2e-122 442.6 268 76.9
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 2.9e-122 442.2 283 73.5
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 3.8e-122 441.8 269 75.8
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 6.5e-122 441.0 272 76.5
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 1.4e-121 439.9 263 76.4
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 3.2e-121 438.7 256 78.9
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 3.2e-121 438.7 275 77.1
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 5.5e-121 438.0 267 77.9
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 7.1e-121 437.6 275 76.7
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 7.1e-121 437.6 259 79.5
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 9.3e-121 437.2 255 78.0
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 1.2e-120 436.8 272 75.4
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 1.6e-120 436.4 244 82.4
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 3.5e-120 435.3 275 76.4
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 3.5e-120 435.3 265 75.8
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 3.5e-120 435.3 272 75.0
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 1.0e-119 433.7 269 73.6
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 1.0e-119 433.7 269 73.6
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.0e-119 433.7 272 76.1
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 1.3e-119 433.3 262 75.2
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 1.3e-119 433.3 272 76.1
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.8e-119 433.0 259 78.8
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 2.3e-119 432.6 255 76.1
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 2.3e-119 432.6 271 75.3
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 3.0e-119 432.2 268 75.0
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 3.9e-119 431.8 271 75.3
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 6.7e-119 431.0 270 75.2
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.1e-118 430.3 272 73.9
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 1.1e-118 430.3 268 74.6
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 4.3e-118 428.3 272 75.4
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 5.7e-118 427.9 272 75.0
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 1.6e-117 426.4 248 79.0
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 2.8e-117 425.6 272 75.7
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 1.4e-116 423.3 267 74.5
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 1.8e-116 422.9 260 76.2
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 3.1e-116 422.2 270 74.1
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 6.9e-116 421.0 268 73.5
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 9.0e-116 420.6 265 75.8
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 2.6e-115 419.1 256 74.2
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 3.4e-115 418.7 272 72.1
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 5.9e-115 417.9 274 73.4
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 5.9e-115 417.9 258 74.4
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 7.6e-115 417.5 262 72.1
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.3e-114 416.8 277 72.6
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 1.7e-114 416.4 264 74.2
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 2.2e-114 416.0 274 74.1
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 2.9e-114 415.6 241 80.5
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 1.1e-113 413.7 274 73.4
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 7.2e-113 411.0 282 70.6
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 2.1e-112 409.5 271 73.8
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 1.3e-111 406.8 221 86.0
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 1.8e-111 406.4 261 72.0
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.8e-111 406.4 253 73.5
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 2.5e-110 402.5 292 65.4
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.3e-109 400.2 290 65.9
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 1.6e-109 399.8 268 70.5
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.1e-108 397.1 253 72.3
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 2.4e-108 396.0 271 70.5
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 3.1e-108 395.6 288 66.3
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 1.7e-106 389.8 275 68.4
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 3.2e-105 385.6 262 70.2
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 7.2e-105 384.4 272 69.5
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 1.6e-104 383.3 230 76.1
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 6.7e-103 377.9 233 71.7
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 8.8e-103 377.5 220 77.3
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 9.7e-102 374.0 292 63.4
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 1.8e-100 369.8 233 70.0
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 1.5e-99 366.7 212 79.2
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 5.9e-99 364.8 237 72.2
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 1.3e-98 363.6 238 67.6
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 4.2e-97 358.6 234 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 2.1e-96 356.3 244 63.5
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 3.0e-95 352.4 237 65.8
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 3.3e-94 349.0 219 68.0
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 3.2e-89 332.4 221 69.7
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 4.2e-89 332.0 195 75.9
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 2.7e-88 329.3 309 55.0
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 2.7e-88 329.3 263 61.6
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 9.7e-86 320.9 233 65.7
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 4.8e-85 318.5 173 90.8
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 7.7e-83 311.2 164 82.9
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.3e-82 310.5 339 50.1
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 2.5e-81 306.2 181 78.5
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 1.2e-80 303.9 291 55.0
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 3.4e-78 295.8 174 74.1
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 1.4e-76 290.4 218 56.4
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 4.0e-71 272.3 164 75.0
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.2e-62 244.2 163 71.2
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 8.3e-61 238.0 138 77.5
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 5.0e-58 228.8 199 57.3
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 8.6e-58 228.0 213 56.3
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 2.5e-49 199.9 123 76.4
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 3.4e-46 189.5 124 71.8
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 7.1e-28 128.6 107 61.7
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.3e-26 124.4 79 75.9
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 1.9e-25 120.6 72 79.2
Psat3g122800 Pisum sativum HOM05D001551 ORTHO05D005859 2.5e-25 120.2 81 67.9
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 6.2e-24 115.5 66 69.7
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 4.0e-23 112.8 66 78.8
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.5e-22 110.9 65 72.3
Psat7g261640 Pisum sativum HOM05D001551 ORTHO05D005859 7.9e-19 98.6 90 58.9
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 1.3e-18 97.8 61 78.7
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 3.3e-17 93.2 86 60.5
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 9.6e-17 91.7 52 75.0
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 1.8e-15 87.4 73 57.5
Duzib084G0670 Durio zibethinus HOM05D001551 ORTHO05D005859 4.9e-13 79.3 60 70.0
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 5.5e-12 75.9 70 57.1
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 1.6e-11 74.3 76 51.3
Ah.11g046990 Amaranthus hybridus HOM05D001551 ORTHO05D005859 6.0e-11 72.4 55 61.8
Ah.02g114530 Amaranthus hybridus HOM05D001551 ORTHO05D005859 1.1e-09 68.2 98 38.8
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 1.3e-08 64.7 67 50.7


User provided reference genes

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