Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 1.6e-127 459.5 246 100.0
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 1.7e-121 439.5 246 93.5
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 1.2e-119 433.3 247 91.9
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 1.2e-119 433.3 247 91.9
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 3.7e-116 421.8 246 89.4
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 3.8e-97 358.6 237 80.6
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.1e-91 340.5 235 79.1
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 2.4e-91 339.3 237 78.9
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 9.1e-91 337.4 235 78.3
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 5.0e-89 331.6 236 78.0
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.5e-88 330.1 235 77.0
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 3.7e-76 288.9 241 66.8
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 2.0e-74 283.1 246 65.0
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 6.1e-63 245.0 223 58.3
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 8.9e-62 241.1 225 60.0
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 2.0e-61 240.0 235 58.3
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 2.0e-61 240.0 206 64.1
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 4.4e-61 238.8 228 60.1
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 4.4e-61 238.8 206 64.1
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 5.7e-61 238.4 232 56.9
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 7.5e-61 238.0 232 58.2
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 4.9e-60 235.3 235 59.1
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 6.4e-60 235.0 191 64.4
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 1.8e-59 233.4 192 64.1
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 2.4e-59 233.0 232 56.9
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.4e-59 233.0 190 62.1
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.4e-59 233.0 190 62.1
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 4.1e-59 232.3 196 63.8
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 4.1e-59 232.3 234 59.0
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 5.4e-59 231.9 228 57.9
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.2e-58 230.7 232 53.9
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.2e-58 230.7 210 58.6
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.2e-58 230.7 180 67.2
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 2.0e-58 229.9 191 64.9
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.7e-58 229.6 188 65.4
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 2.7e-58 229.6 230 57.4
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 5.9e-58 228.4 183 66.1
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 5.9e-58 228.4 192 63.5
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 5.9e-58 228.4 187 64.2
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 7.8e-58 228.0 183 65.6
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 7.8e-58 228.0 187 64.7
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 7.8e-58 228.0 226 57.1
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.0e-57 227.6 196 60.7
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 1.0e-57 227.6 187 64.7
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 1.0e-57 227.6 169 67.5
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 1.7e-57 226.9 201 60.7
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.7e-57 226.9 190 63.2
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 5.0e-57 225.3 237 53.6
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 5.0e-57 225.3 191 62.8
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 6.6e-57 224.9 222 56.8
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-56 224.2 232 54.3
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.1e-56 224.2 167 71.9
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.5e-56 223.8 232 53.0
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 2.5e-56 223.0 203 60.6
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 2.5e-56 223.0 220 55.0
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 4.3e-56 222.2 223 55.6
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 4.3e-56 222.2 202 59.9
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 5.6e-56 221.9 189 61.4
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 7.3e-56 221.5 192 60.9
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 4.7e-55 218.8 238 54.6
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 8.0e-55 218.0 194 59.3
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.0e-54 217.6 201 60.7
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 3.1e-54 216.1 201 57.2
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 8.9e-54 214.5 233 54.5
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.2e-53 214.2 227 54.2
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.5e-53 213.8 285 48.1
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 2.6e-53 213.0 165 66.7
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 4.4e-53 212.2 168 64.9
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 7.5e-53 211.5 165 66.1
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 9.8e-53 211.1 230 54.3
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.2e-52 209.9 241 50.2
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 3.7e-52 209.1 229 52.8
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 4.9e-52 208.8 162 64.2
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 4.9e-52 208.8 161 67.1
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 8.3e-52 208.0 150 66.7
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.9e-51 206.8 183 61.7
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 2.4e-51 206.5 250 54.8
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.2e-51 206.1 175 62.3
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.2e-51 206.1 225 52.9
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.2e-50 204.1 217 53.9
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 1.2e-50 204.1 232 52.2
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 3.5e-50 202.6 185 60.0
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 3.5e-50 202.6 246 49.2
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 4.6e-50 202.2 225 53.8
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 1.5e-48 197.2 134 68.7
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 2.5e-48 196.4 138 70.3
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 5.6e-48 195.3 196 52.6
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 7.3e-48 194.9 265 45.3
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 6.2e-47 191.8 188 56.4
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 9.5e-40 167.9 219 45.2
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.2e-39 167.5 151 60.9
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 1.6e-39 167.2 190 51.6
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.9e-33 146.0 169 50.3
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 6.6e-33 145.2 99 68.7
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 4.3e-32 142.5 101 66.3
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 8.1e-31 138.3 161 46.0
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 1.3e-25 120.9 132 54.5
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 5.1e-25 119.0 118 56.8
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 6.6e-25 118.6 94 67.0
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.9e-24 117.1 164 41.5
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.3e-23 114.4 100 69.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 2.9e-20 103.2 81 58.0
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.2e-19 99.8 65 73.8
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 4.3e-16 89.4 91 60.4
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.6e-15 87.4 90 48.9
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 4.9e-12 75.9 126 46.0
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.0e-09 66.6 55 60.0
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 3.9e-09 66.2 60 61.7
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.3e-08 62.8 73 50.7
Aa31LG10G9070 Aethionema arabicum HOM05D007115 ORTHO05D008923 4.0e-06 56.2 102 48.0


User provided reference genes

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