Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 3.1e-226 788.1 395 100.0
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 1.4e-213 746.1 379 98.4
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.4e-210 736.1 379 95.3
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 4.7e-198 694.5 392 89.3
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 5.2e-197 691.0 391 89.8
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 3.3e-183 645.2 387 86.8
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.6e-150 536.6 402 72.1
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 1.7e-131 473.4 435 60.5
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 8.5e-131 471.1 418 62.0
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 1.8e-128 463.4 434 59.9
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 3.9e-120 435.6 438 55.3
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 1.6e-113 413.7 451 53.0
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 4.2e-90 335.9 386 50.3
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.4e-85 320.9 434 43.1
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 2.4e-85 320.1 450 42.2
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 3.1e-85 319.7 445 43.1
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.2e-84 317.8 446 44.8
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 1.2e-84 317.8 429 43.1
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 2.0e-84 317.0 395 47.6
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 3.5e-84 316.2 427 45.2
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 7.8e-84 315.1 440 41.6
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 7.8e-84 315.1 425 45.2
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.0e-83 314.7 429 44.1
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 3.8e-83 312.8 470 41.9
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 1.1e-82 311.2 446 41.7
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 2.5e-82 310.1 464 41.4
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 5.6e-82 308.9 444 42.3
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 7.3e-82 308.5 373 46.9
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 1.6e-81 307.4 394 44.9
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 2.1e-81 307.0 440 41.4
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 6.1e-81 305.4 442 42.8
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 8.0e-81 305.1 440 42.5
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.8e-80 303.9 427 44.5
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 2.3e-80 303.5 450 41.6
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 2.3e-80 303.5 433 42.3
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 2.3e-80 303.5 443 42.0
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 5.2e-80 302.4 449 42.3
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 8.9e-80 301.6 471 40.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.2e-79 301.2 425 44.0
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.5e-79 300.8 431 43.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 5.8e-79 298.9 412 43.0
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 3.7e-78 296.2 441 42.6
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 1.1e-77 294.7 434 44.2
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 3.2e-77 293.1 443 42.2
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 1.2e-76 291.2 416 41.8
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-76 290.8 429 41.7
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-76 290.8 429 41.7
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-76 290.8 429 41.7
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.0e-75 288.1 433 40.9
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.3e-75 287.0 420 42.9
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 8.6e-75 285.0 391 43.7
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.1e-74 284.6 423 40.0
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 2.5e-74 283.5 453 40.4
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 7.3e-74 282.0 442 39.6
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 9.5e-74 281.6 483 37.3
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 8.0e-73 278.5 436 39.7
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 3.1e-72 276.6 457 39.2
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.5e-71 274.2 440 38.9
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 2.6e-71 273.5 438 40.0
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 4.4e-71 272.7 450 38.9
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 7.5e-71 271.9 431 39.4
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 3.7e-70 269.6 436 41.1
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 8.3e-70 268.5 160 77.5
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 1.1e-69 268.1 440 40.5
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 3.2e-69 266.5 452 38.5
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 4.1e-69 266.2 429 38.7
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 4.1e-69 266.2 412 40.8
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 7.0e-69 265.4 474 38.0
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 2.7e-68 263.5 425 40.0
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 3.5e-68 263.1 424 38.9
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.3e-67 261.2 436 39.9
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 2.3e-67 260.4 423 37.8
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 3.9e-67 259.6 430 38.6
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 1.1e-66 258.1 391 40.2
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 2.1e-65 253.8 432 38.0
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 3.6e-65 253.1 405 41.0
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 8.1e-65 251.9 415 40.0
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 8.9e-64 248.4 445 37.3
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 5.8e-63 245.7 476 35.3
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 2.9e-62 243.4 386 37.6
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.9e-61 240.7 424 39.4
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.1e-58 231.5 411 35.8
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 5.8e-55 219.2 265 48.7
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 1.2e-52 211.5 244 48.0
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 1.6e-52 211.1 235 53.6
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 3.5e-52 209.9 427 34.7
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 6.0e-52 209.1 196 53.6
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 1.0e-51 208.4 546 28.8
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 1.7e-51 207.6 407 36.4
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.5e-50 204.5 224 49.1
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 9.6e-50 201.8 222 48.6
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 3.1e-48 196.8 404 33.9
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.0e-47 194.1 462 30.1
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.9e-46 190.3 142 58.5
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 3.5e-44 183.3 132 59.1
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 1.0e-43 181.8 459 32.2
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 1.5e-42 177.9 170 57.6
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 2.5e-42 177.2 137 59.9
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 2.8e-41 173.7 371 34.5
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 8.1e-41 172.2 324 39.2
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 8.4e-38 162.2 130 57.7
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 1.6e-36 157.9 487 27.1
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 2.1e-36 157.5 318 35.5
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.7e-36 157.1 330 36.7
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 7.9e-36 155.6 189 43.4
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 7.9e-36 155.6 189 43.4
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.0e-35 155.2 125 58.4
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 9.0e-32 142.1 196 39.8
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 1.4e-29 134.8 180 43.9
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 1.6e-28 131.3 117 47.9
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 2.1e-28 131.0 166 47.0
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 2.5e-26 124.0 144 47.2
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 2.5e-26 124.0 161 44.7
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 5.6e-26 122.9 134 41.8
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 9.6e-26 122.1 160 43.8
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.6e-25 121.3 214 36.9
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.6e-25 121.3 160 43.8
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 1.4e-24 118.2 148 44.6
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 1.2e-23 115.2 161 44.7
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.9e-22 110.5 164 40.2
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 3.2e-21 107.1 166 41.0
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 9.3e-21 105.5 140 34.3
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.0e-19 102.1 153 39.9
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 3.9e-19 100.1 122 47.5
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 9.7e-18 95.5 134 44.0
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 4.8e-17 93.2 117 41.9
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 8.2e-17 92.4 92 50.0
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 8.5e-14 82.4 156 40.4
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.4e-13 81.6 168 33.3
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 1.4e-11 75.1 147 38.8
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.1e-08 65.5 176 31.2
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.4e-08 64.3 49 59.2
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 4.5e-07 60.1 71 42.3


User provided reference genes

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