Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 6.1e-152 540.8 275 100.0
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 1.9e-150 535.8 275 99.3
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 3.7e-149 531.6 275 98.5
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 1.1e-142 510.0 275 94.9
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 3.7e-141 505.0 275 94.5
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 6.5e-138 494.2 267 93.3
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.7e-112 409.1 256 77.3
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 2.3e-111 406.0 256 76.2
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 4.0e-111 405.2 256 78.1
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 4.4e-110 401.7 256 75.4
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 1.7e-109 399.8 261 75.9
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 4.1e-108 395.2 256 74.6
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 3.5e-107 392.1 264 74.6
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 3.3e-105 385.6 257 73.5
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 7.8e-99 364.4 256 69.9
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 2.9e-98 362.5 230 75.2
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 5.0e-98 361.7 230 75.7
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 9.5e-89 330.9 269 59.9
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 8.1e-88 327.8 262 59.5
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 8.1e-88 327.8 271 58.3
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 2.3e-87 326.2 262 58.8
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.3e-87 326.2 267 60.3
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 3.1e-87 325.9 264 59.8
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 5.2e-87 325.1 262 59.9
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 8.9e-87 324.3 259 59.5
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 1.5e-86 323.6 262 59.5
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 1.5e-86 323.6 262 59.9
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.5e-86 323.6 250 62.0
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.0e-86 323.2 262 59.2
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 7.5e-86 321.2 262 59.2
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 7.5e-86 321.2 262 59.2
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 7.5e-86 321.2 262 59.2
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.3e-85 320.5 258 59.3
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 3.2e-84 315.8 269 56.1
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 3.2e-84 315.8 258 60.1
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.2e-83 313.9 263 58.6
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 1.6e-83 313.5 268 58.2
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 7.8e-83 311.2 266 56.8
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 7.8e-83 311.2 259 59.5
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.0e-82 310.8 267 56.2
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 1.7e-82 310.1 266 56.0
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 2.3e-82 309.7 261 58.6
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 6.6e-82 308.1 268 55.6
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 6.6e-82 308.1 259 57.1
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 1.5e-81 307.0 260 57.7
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 2.5e-81 306.2 264 56.4
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 3.3e-81 305.8 273 55.3
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 3.3e-81 305.8 268 54.5
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 3.3e-81 305.8 256 57.0
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 7.3e-81 304.7 268 54.1
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 1.2e-80 303.9 257 58.0
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 1.2e-80 303.9 268 53.7
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 3.6e-80 302.4 258 56.2
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 8.1e-80 301.2 277 54.9
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 1.1e-79 300.8 256 56.6
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 1.4e-79 300.4 259 56.4
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 1.8e-79 300.1 255 56.9
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 2.3e-79 299.7 269 55.0
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 2.3e-79 299.7 273 53.1
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 2.3e-79 299.7 268 56.0
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 3.1e-79 299.3 263 54.8
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 4.0e-79 298.9 257 55.6
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 4.0e-79 298.9 256 56.2
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 4.0e-79 298.9 271 53.5
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 6.8e-79 298.1 264 55.7
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 8.9e-79 297.7 258 57.8
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.2e-78 297.4 269 53.9
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.2e-78 297.4 269 53.9
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 1.2e-78 297.4 266 54.5
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 1.2e-78 297.4 270 54.4
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 1.5e-78 297.0 272 55.1
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.5e-78 297.0 256 55.9
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.0e-78 296.6 228 62.3
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.0e-78 296.6 267 55.1
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 2.6e-78 296.2 261 55.9
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.4e-78 295.8 269 54.6
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 4.4e-78 295.4 257 56.4
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 5.8e-78 295.0 262 55.7
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 7.6e-78 294.7 274 53.6
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 2.2e-77 293.1 258 55.4
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 2.9e-77 292.7 265 54.3
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 4.9e-77 292.0 277 53.4
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 4.9e-77 292.0 259 54.8
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 1.4e-76 290.4 258 55.0
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 5.4e-76 288.5 270 54.1
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 7.1e-76 288.1 259 54.4
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 3.5e-75 285.8 273 50.9
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 3.5e-75 285.8 261 52.5
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 3.5e-75 285.8 269 51.7
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.0e-75 285.0 181 76.8
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 6.0e-75 285.0 252 54.0
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 6.0e-75 285.0 259 53.7
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 8.6e-74 281.2 261 51.7
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.5e-73 280.4 262 55.0
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 4.3e-73 278.9 259 52.5
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 7.3e-73 278.1 269 50.9
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 7.3e-73 278.1 261 51.7
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 6.8e-71 271.6 237 54.4
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.2e-70 270.8 257 50.6
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 1.5e-70 270.4 279 47.7
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 3.4e-70 269.2 166 78.9
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 4.4e-70 268.9 278 49.6
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 5.8e-70 268.5 263 52.5
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 7.6e-70 268.1 259 51.0
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 2.9e-69 266.2 250 52.0
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 3.8e-69 265.8 264 52.3
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 6.4e-69 265.0 261 51.3
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 1.2e-67 260.8 256 52.0
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.2e-67 260.8 166 73.5
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 2.1e-67 260.0 264 49.6
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 2.1e-67 260.0 264 49.6
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 4.6e-67 258.8 258 50.0
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 7.8e-67 258.1 261 49.4
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.3e-66 256.5 258 50.0
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 1.1e-65 254.2 219 56.2
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.9e-65 253.4 258 48.8
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 7.3e-65 251.5 270 47.8
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 2.4e-63 246.5 254 47.2
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 2.0e-62 243.4 270 46.7
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 2.6e-62 243.0 264 47.0
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 2.6e-62 243.0 264 47.0
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 5.8e-62 241.9 219 53.0
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 9.9e-62 241.1 268 46.6
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 1.3e-61 240.7 275 46.9
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 8.4e-61 238.0 255 46.3
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.1e-60 237.7 231 51.1
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 4.2e-60 235.7 264 46.6
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 7.1e-60 235.0 220 51.8
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.6e-59 233.8 161 70.8
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 1.3e-58 230.7 251 43.8
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.7e-58 230.3 221 51.1
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 2.3e-58 229.9 219 50.7
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 5.6e-57 225.3 169 60.9
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 2.4e-55 219.9 188 53.2
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 9.0e-55 218.0 236 48.3
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 2.6e-54 216.5 222 51.8
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.5e-51 206.1 264 45.8
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 1.1e-47 194.5 254 42.5
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.4e-47 194.1 254 41.7
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 3.2e-44 183.0 163 51.5
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 7.9e-43 178.3 169 51.5
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 3.0e-42 176.4 267 42.3
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 4.3e-41 172.6 236 41.5
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 1.1e-36 157.9 403 30.0
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 3.5e-35 152.9 259 37.8
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.3e-34 151.0 109 73.4
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.3e-32 144.4 137 54.7
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 4.8e-32 142.5 237 38.0
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 6.5e-29 132.1 236 36.4
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 8.5e-29 131.7 117 55.6
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 5.1e-26 122.5 117 53.0
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 2.4e-23 113.6 219 32.4
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 4.5e-22 109.4 96 51.0
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 6.7e-18 95.5 115 43.5
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 4.4e-17 92.8 185 33.5
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.7e-16 90.9 62 74.2
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 3.7e-16 89.7 205 28.8
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.8e-15 87.4 70 55.7
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 5.3e-15 85.9 185 31.9
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 7.0e-15 85.5 220 25.9
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 1.6e-11 74.3 86 46.5
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 1.4e-10 71.2 65 49.2
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 3.3e-09 66.6 43 69.8
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 1.4e-07 61.2 70 42.9
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 2.4e-07 60.5 77 45.5
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 1.6e-06 57.8 277 26.0
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 2.0e-06 57.4 55 50.9
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 2.7e-06 57.0 66 37.9


User provided reference genes

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