Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p18470 Brassica napus HOM05D010017 ORTHO05D016617 5.0e-54 214.2 107 100.0
BcaC09g50983 Brassica carinata HOM05D010017 ORTHO05D012143 2.8e-52 208.4 103 100.0
BolC1t01770H Brassica oleracea HOM05D010017 ORTHO05D016617 2.8e-52 208.4 103 100.0
A01p14780 Brassica napus HOM05D000630 ORTHO05D016617 3.2e-48 194.9 105 95.2
BraA01t01419Z Brassica rapa HOM05D000630 ORTHO05D016617 3.2e-48 194.9 105 95.2
C01p18430 Brassica napus HOM05D000005 ORTHO05D012143 1.1e-37 159.8 94 86.2
BolC1t01765H Brassica oleracea HOM05D000005 ORTHO05D012143 1.1e-37 159.8 94 86.2
Thhalv10027371m.g Eutrema salsugineum HOM05D010017 ORTHO05D012143 6.2e-36 154.1 94 76.6
BcaNung04486 Brassica carinata HOM05D010017 ORTHO05D012143 6.0e-31 137.5 94 69.1
BcaNung01060 Brassica carinata HOM05D010017 ORTHO05D012143 1.5e-26 122.9 95 67.4
AT4G23510 Arabidopsis thaliana HOM05D000005 ORTHO05D012143 6.4e-25 117.5 94 59.6
Sp7g21410 Schrenkiella parvula HOM05D010017 ORTHO05D012143 1.1e-24 116.7 90 61.1
CARHR230870 Cardamine hirsuta HOM05D000005 ORTHO05D012143 7.9e-23 110.5 94 58.5
AL7G29930 Arabidopsis lyrata HOM05D010017 ORTHO05D012143 1.3e-22 109.8 98 54.1
Carub.0007s1771 Capsella rubella HOM05D000005 ORTHO05D012143 6.7e-22 107.5 94 53.2
C01p18360 Brassica napus HOM05D010017 ORTHO05D012143 2.6e-18 95.5 101 48.5
A01p14750 Brassica napus HOM05D010017 ORTHO05D012143 7.6e-18 94.0 101 48.5
C01p18320 Brassica napus HOM05D010017 ORTHO05D012143 7.6e-18 94.0 101 47.5
BolC1t01756H Brassica oleracea HOM05D010017 ORTHO05D012143 7.6e-18 94.0 101 47.5
BraA01t01414Z Brassica rapa HOM05D010017 ORTHO05D012143 7.6e-18 94.0 101 48.5
BcaNung01059 Brassica carinata HOM05D010017 ORTHO05D012143 8.4e-17 90.5 75 60.0
C01p18410 Brassica napus HOM05D010017 ORTHO05D031304 1.4e-16 89.7 94 47.9
BolC1t01763H Brassica oleracea HOM05D010017 ORTHO05D031304 1.4e-16 89.7 94 47.9
C01p18380 Brassica napus HOM05D010017 ORTHO05D012143 5.5e-16 87.8 90 51.1
BolC1t01760H Brassica oleracea HOM05D000005 ORTHO05D012143 5.5e-16 87.8 90 51.1
Aa31LG6G6710 Aethionema arabicum HOM05D000005 ORTHO05D012143 2.1e-12 75.9 100 41.0
Aa31LG6G6720 Aethionema arabicum HOM05D000005 ORTHO05D012143 5.3e-11 71.2 97 43.3
CARHR255230 Cardamine hirsuta HOM05D000005 ORTHO05D014841 7.1e-08 60.8 101 36.6
THA.LOC104825034 Tarenaya hassleriana HOM05D000005 ORTHO05D012471 1.6e-07 59.7 93 35.5


User provided reference genes

Program Settings