Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p18300 Brassica napus HOM05D010017 ORTHO05D012143 7.4e-206 720.3 363 100.0
C01p18360 Brassica napus HOM05D010017 ORTHO05D012143 6.5e-162 574.3 439 71.8
C01p18320 Brassica napus HOM05D010017 ORTHO05D012143 3.8e-146 521.9 415 69.4
A01p14750 Brassica napus HOM05D010017 ORTHO05D012143 1.1e-145 520.4 415 69.6
BraA01t01414Z Brassica rapa HOM05D010017 ORTHO05D012143 8.0e-144 514.2 415 68.9
BolC1t01756H Brassica oleracea HOM05D010017 ORTHO05D012143 3.4e-134 482.3 527 55.6
BcaC09g50987 Brassica carinata HOM05D010017 ORTHO05D012143 4.0e-127 458.8 252 94.4
BcaC09g50983 Brassica carinata HOM05D010017 ORTHO05D012143 1.0e-122 444.1 410 62.2
Sp7g21410 Schrenkiella parvula HOM05D010017 ORTHO05D012143 8.4e-85 318.2 388 50.8
C01p18380 Brassica napus HOM05D010017 ORTHO05D012143 1.5e-73 280.8 453 42.8
BcaNung01059 Brassica carinata HOM05D010017 ORTHO05D012143 1.4e-68 264.2 430 42.8
BolC1t01754H Brassica oleracea HOM05D010017 ORTHO05D012143 4.7e-59 232.6 119 98.3
BcaNung01060 Brassica carinata HOM05D010017 ORTHO05D012143 8.2e-56 221.9 440 36.6
BcaNung04486 Brassica carinata HOM05D010017 ORTHO05D012143 5.3e-55 219.2 384 38.8
AL7G29930 Arabidopsis lyrata HOM05D010017 ORTHO05D012143 9.1e-47 191.8 378 37.6
BolC1t01760H Brassica oleracea HOM05D000005 ORTHO05D012143 1.3e-40 171.4 453 33.6
Thhalv10027371m.g Eutrema salsugineum HOM05D010017 ORTHO05D012143 3.7e-40 169.9 365 35.1
C01p18410 Brassica napus HOM05D010017 ORTHO05D031304 1.3e-37 161.4 238 44.5
BolC1t01763H Brassica oleracea HOM05D010017 ORTHO05D031304 1.3e-37 161.4 238 44.5
CARHR230870 Cardamine hirsuta HOM05D000005 ORTHO05D012143 6.8e-34 149.1 246 42.7
AT4G23510 Arabidopsis thaliana HOM05D000005 ORTHO05D012143 2.3e-26 124.0 216 39.8
BcaC09g50985 Brassica carinata HOM05D010017 ORTHO05D091286 1.5e-25 121.3 81 76.5
AL4G33900 Arabidopsis lyrata HOM05D010017 ORTHO05D031304 3.3e-20 103.6 97 55.7
Carub.0007s1771 Capsella rubella HOM05D000005 ORTHO05D012143 6.8e-18 95.9 156 37.8
Aa31LG6G6710 Aethionema arabicum HOM05D000005 ORTHO05D012143 3.7e-16 90.1 128 43.0
Aa31LG6G6720 Aethionema arabicum HOM05D000005 ORTHO05D012143 4.6e-14 83.2 171 37.4
BcaNung01054 Brassica carinata HOM05D010017 ORTHO05D090327 4.0e-10 70.1 60 65.0
C01p18430 Brassica napus HOM05D000005 ORTHO05D012143 4.1e-07 60.1 204 29.4
BolC1t01765H Brassica oleracea HOM05D000005 ORTHO05D012143 4.1e-07 60.1 204 29.4


User provided reference genes

Program Settings