Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p18190 Brassica napus HOM05D008385 ORTHO05D010806 1.2e-98 363.2 189 100.0
C01p18170 Brassica napus HOM05D008385 ORTHO05D010806 5.9e-98 360.9 189 99.5
A01p14680 Brassica napus HOM05D008385 ORTHO05D010806 1.3e-97 359.8 189 98.4
BolC1t01744H Brassica oleracea HOM05D008385 ORTHO05D010806 2.3e-94 349.0 185 98.4
BraA01t01408Z Brassica rapa HOM05D008385 ORTHO05D010806 1.0e-89 333.6 189 90.5
BraA01t01407Z Brassica rapa HOM05D008385 ORTHO05D010806 1.2e-85 320.1 186 88.2
A01p14670 Brassica napus HOM05D008385 ORTHO05D010806 2.0e-85 319.3 181 91.2
BcaC09g50995 Brassica carinata HOM05D008385 ORTHO05D010806 1.2e-82 310.1 160 97.5
BraA08t35266Z Brassica rapa HOM05D008385 ORTHO05D010806 6.4e-60 234.6 188 61.7
A08p33500 Brassica napus HOM05D008385 ORTHO05D010806 1.1e-59 233.8 183 62.8
C08p14420 Brassica napus HOM05D008385 ORTHO05D010806 1.9e-56 223.0 188 61.2
BolC8t49085H Brassica oleracea HOM05D008385 ORTHO05D010806 7.5e-53 211.1 173 62.4
A08p15720 Brassica napus HOM05D008385 ORTHO05D010806 6.2e-47 191.4 188 55.9
AL1G58570 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 3.8e-44 182.2 183 54.1
Thhalv10009973m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 4.9e-44 181.8 187 54.0
AT3G27999 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 6.4e-44 181.4 189 50.3
Thhalv10027565m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 5.4e-43 178.3 183 53.0
AT1G11593 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 7.1e-43 177.9 189 49.2
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 1.2e-42 177.2 184 53.3
AT4G03945 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.1e-42 176.4 189 50.3
Carub.0006s3013 Capsella rubella HOM05D008385 ORTHO05D010806 2.1e-42 176.4 183 52.5
Thhalv10009564m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.5e-37 160.2 187 49.7
Carub.0001s1209 Capsella rubella HOM05D008385 ORTHO05D010806 2.0e-37 159.8 183 43.7
Carub.0001s1211 Capsella rubella HOM05D008385 ORTHO05D010806 8.4e-36 154.5 184 43.5
Thhalv10010004m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 1.1e-35 154.1 187 47.1
Thhalv10019766m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 4.6e-34 148.7 175 50.3
BolC8t49088H Brassica oleracea HOM05D008385 ORTHO05D010806 1.3e-33 147.1 142 52.1
BolC8t49089H Brassica oleracea HOM05D008385 ORTHO05D010806 8.7e-33 144.4 142 51.4
Thhalv10027044m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 8.7e-33 144.4 182 45.1
Carub.0002s0689 Capsella rubella HOM05D008385 ORTHO05D010806 1.1e-32 144.1 156 47.4
Carub.0008s1111 Capsella rubella HOM05D008385 ORTHO05D010806 4.0e-30 135.6 192 41.1
AT1G50325 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 2.2e-28 129.8 191 40.8
Carub.0008s1110 Capsella rubella HOM05D008385 ORTHO05D010806 4.6e-26 122.1 192 39.1
AT1G11362 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.0e-25 120.9 176 42.6
Carub.0001s2729 Capsella rubella HOM05D008385 ORTHO05D010806 1.3e-25 120.6 192 37.5
BcaB03g13260 Brassica carinata HOM05D008385 ORTHO05D010806 1.1e-24 117.5 100 60.0
Carub.0001s1097 Capsella rubella HOM05D008385 ORTHO05D010806 1.3e-20 104.0 184 34.2
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 4.9e-20 102.1 177 40.1
Thhalv10012028m.g Eutrema salsugineum HOM05D008385 ORTHO05D010806 2.1e-18 96.7 174 37.4
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 2.1e-18 96.7 179 38.5
BcaC07g38659 Brassica carinata HOM05D008385 ORTHO05D010806 7.9e-18 94.7 85 56.5
Carub.0001s2747 Capsella rubella HOM05D008385 ORTHO05D010806 1.0e-17 94.4 137 39.4
Aa31LG10G5780 Aethionema arabicum HOM05D000036 ORTHO05D001038 9.6e-16 87.8 135 38.5
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 4.8e-15 85.5 154 37.0
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.1e-14 84.3 177 36.7
AT1G50340 Arabidopsis thaliana HOM05D008385 ORTHO05D010806 1.4e-14 84.0 147 38.8
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-11 74.3 178 30.3
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-11 74.3 184 31.0
Aa31LG10G5730 Aethionema arabicum HOM05D008385 ORTHO05D010806 1.4e-11 73.9 133 36.1
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.9e-11 73.6 163 29.4
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 3.2e-11 72.8 179 32.4
Aa31LG10G5760 Aethionema arabicum HOM05D008385 ORTHO05D010806 9.3e-11 71.2 176 30.7
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 1.6e-10 70.5 172 32.6
THA.LOC104825839 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 2.1e-10 70.1 165 30.9
Carub.0007s3098 Capsella rubella HOM05D008385 ORTHO05D010806 4.6e-10 68.9 111 36.0
AL1G57970 Arabidopsis lyrata HOM05D008385 ORTHO05D010806 6.1e-10 68.6 107 38.3
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.9e-10 68.2 178 29.2
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.8e-09 67.0 182 29.7
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.9e-09 65.9 182 29.7
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 1.5e-08 63.9 177 27.7
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 3.3e-08 62.8 184 25.5
QL04p032132 Quercus lobata HOM05D003146 ORTHO05D001819 4.3e-08 62.4 150 27.3
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 7.4e-08 61.6 177 27.1
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 9.7e-08 61.2 184 26.1
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 1.3e-07 60.8 140 32.9
A08p05340 Brassica napus HOM05D003146 ORTHO05D001819 1.6e-07 60.5 184 27.2
BraSC267t45946Z Brassica rapa HOM05D003146 ORTHO05D001819 1.6e-07 60.5 184 27.2
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 2.8e-07 59.7 184 26.6
BcaC07g37182 Brassica carinata HOM05D003146 ORTHO05D001819 2.8e-07 59.7 184 27.2
BcaB04g17471 Brassica carinata HOM05D003146 ORTHO05D001819 3.7e-07 59.3 184 26.1
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 4.8e-07 58.9 184 26.6
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 4.8e-07 58.9 184 26.6
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 4.8e-07 58.9 184 26.6
QL04p033186 Quercus lobata HOM05D003146 ORTHO05D001819 4.8e-07 58.9 150 25.3
BolC8t47376H Brassica oleracea HOM05D003146 ORTHO05D001819 6.3e-07 58.5 184 26.1
C08p05630 Brassica napus HOM05D003146 ORTHO05D001819 8.2e-07 58.2 184 26.1
QL04p005594 Quercus lobata HOM05D003146 ORTHO05D001819 1.1e-06 57.8 139 27.3
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 1.4e-06 57.4 174 27.0
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 1.8e-06 57.0 174 27.0
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.4e-06 56.6 178 28.1
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 4.1e-06 55.8 184 25.5
AL1G54590 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 6.9e-06 55.1 170 25.9
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 6.9e-06 55.1 184 24.5


User provided reference genes

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