Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 0.0e+00 1126.3 578 100.0
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 0.0e+00 1126.3 578 100.0
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 1.7e-265 919.1 475 100.0
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 5.5e-139 498.8 299 91.3
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 6.3e-135 485.3 299 89.0
C04p15290 Brassica napus HOM05D007694 ORTHO05D103098 2.8e-114 416.8 264 81.4
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 7.8e-93 345.5 174 98.9
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.5e-91 341.3 451 47.5
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 4.8e-90 336.3 452 46.9
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 7.1e-86 322.4 288 67.0
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 5.8e-80 302.8 288 60.1
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 1.2e-72 278.5 302 60.6
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.0e-71 275.4 375 53.1
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 2.9e-71 273.9 285 65.3
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 1.4e-70 271.6 302 60.6
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.1e-67 261.9 302 57.6
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 5.7e-67 259.6 296 58.4
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 1.6e-61 241.5 296 56.1
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 4.6e-61 240.0 296 56.4
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 5.7e-59 233.0 180 68.9
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 7.4e-59 232.6 293 51.9
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 1.1e-57 228.8 413 40.4
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 8.8e-52 209.1 181 71.8
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.7e-50 204.9 143 74.8
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 9.1e-49 199.1 202 54.5
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 2.6e-48 197.6 202 54.0
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 2.6e-48 197.6 202 54.0
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 4.2e-46 190.3 204 52.9
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 1.2e-45 188.7 423 37.4
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 2.7e-45 187.6 215 62.3
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 6.1e-45 186.4 185 64.3
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 1.4e-44 185.3 202 51.0
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 3.0e-44 184.1 204 52.0
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 5.2e-44 183.3 187 63.1
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 1.5e-43 181.8 202 50.0
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 9.7e-43 179.1 202 50.5
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 2.8e-42 177.6 202 50.0
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 1.1e-41 175.6 446 35.0
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 7.0e-41 172.9 204 52.0
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 9.1e-41 172.6 204 51.5
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 4.5e-40 170.2 185 63.2
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.7e-39 168.3 191 52.4
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.2e-39 167.9 204 51.5
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 1.1e-38 165.6 112 72.3
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 3.2e-38 164.1 200 48.5
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 7.2e-38 162.9 191 51.3
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 9.4e-38 162.5 191 50.3
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.2e-37 162.2 200 48.0
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 1.6e-37 161.8 456 32.5
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 4.0e-36 157.1 330 35.8
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 1.2e-35 155.6 175 53.7
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 4.4e-35 153.7 202 46.5
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 1.7e-34 151.8 346 34.4
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 8.2e-34 149.4 131 61.8
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 3.6e-29 134.0 156 58.3
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 6.8e-28 129.8 334 39.5
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 8.8e-28 129.4 198 41.9
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 2.2e-26 124.8 166 48.2
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 4.8e-26 123.6 163 48.5
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 1.1e-25 122.5 134 56.7
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 3.8e-23 114.0 133 49.6
BcaC07g37563 Brassica carinata HOM05D007694 ORTHO05D091300 1.1e-22 112.5 150 61.3
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 9.5e-22 109.4 159 47.8
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 9.5e-22 109.4 122 50.8
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 2.6e-19 101.3 121 47.9
BcaC01g05258 Brassica carinata HOM05D007694 ORTHO05D096253 2.8e-18 97.8 200 49.0
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 3.1e-17 94.4 181 37.0
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 3.1e-17 94.4 62 72.6
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 3.1e-17 94.4 62 72.6
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 7.0e-17 93.2 175 36.6
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 9.2e-17 92.8 181 37.0
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 1.2e-16 92.4 199 40.2
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 1.2e-16 92.4 181 35.9
BcaNung05554 Brassica carinata HOM05D007694 ORTHO05D019980 3.5e-16 90.9 123 54.5
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 5.9e-16 90.1 108 47.2
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 1.7e-15 88.6 169 36.1
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 2.9e-15 87.8 144 41.0
C05p30650 Brassica napus HOM05D012090 ORTHO05D016799 6.6e-15 86.7 66 69.7
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 8.6e-15 86.3 170 41.2
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 1.5e-14 85.5 180 35.6
C07p21690 Brassica napus HOM05D012090 ORTHO05D016799 1.5e-14 85.5 60 70.0
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 1.9e-14 85.1 170 40.6
A02p28260 Brassica napus HOM05D012090 ORTHO05D016799 2.5e-14 84.7 62 67.7
BolC7t42700H Brassica oleracea HOM05D012090 ORTHO05D016799 2.5e-14 84.7 60 68.3
BolC5t31798H Brassica oleracea HOM05D012090 ORTHO05D016799 3.3e-14 84.3 66 68.2
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 4.3e-14 84.0 104 46.2
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 2.1e-13 81.6 87 50.6
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 2.1e-13 81.6 167 34.7
BraA02t05833Z Brassica rapa HOM05D012090 ORTHO05D012993 2.1e-13 81.6 74 62.2
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 6.1e-13 80.1 56 73.2
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 8.0e-13 79.7 159 39.6
BcaC05g27170 Brassica carinata HOM05D012090 ORTHO05D016799 8.0e-13 79.7 59 67.8
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 8.0e-13 79.7 159 39.6
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 8.0e-13 79.7 154 39.6
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 2.3e-12 78.2 181 39.2
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 4.0e-12 77.4 154 39.0
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 5.2e-12 77.0 92 51.1
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 6.8e-12 76.6 151 40.4
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 1.2e-11 75.9 86 48.8
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 1.5e-11 75.5 91 46.2
BcaC06g34930 Brassica carinata HOM05D012090 ORTHO05D016799 2.0e-11 75.1 53 69.8
BraA02t07861Z Brassica rapa HOM05D012090 ORTHO05D027211 5.8e-11 73.6 50 68.0
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 7.5e-11 73.2 86 48.8
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 1.3e-10 72.4 77 51.9
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 1.3e-10 72.4 77 51.9
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 1.7e-10 72.0 73 56.2
BolC3t13901H Brassica oleracea HOM05D007694 ORTHO05D019969 1.7e-10 72.0 111 42.3
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 3.7e-10 70.9 153 34.6
A09p60520 Brassica napus HOM05D010036 ORTHO05D102689 6.4e-10 70.1 66 59.1
C04p72940 Brassica napus HOM05D007694 ORTHO05D040685 1.4e-09 68.9 51 70.6
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.9e-09 68.6 83 47.0
BraA01t00165Z Brassica rapa HOM05D009832 ORTHO05D012823 1.9e-09 68.6 44 72.7
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 4.1e-09 67.4 181 42.5
BolC6t36831H Brassica oleracea HOM05D009832 ORTHO05D106286 5.4e-09 67.0 52 63.5
A09p41260 Brassica napus HOM05D016611 ORTHO05D099774 7.0e-09 66.6 46 69.6
C06p16310 Brassica napus HOM05D009832 ORTHO05D032737 7.0e-09 66.6 53 62.3
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 7.0e-09 66.6 54 64.8
C01p13390 Brassica napus HOM05D009832 ORTHO05D012823 1.6e-08 65.5 63 52.4
BcaC04g22211 Brassica carinata HOM05D040530 ORTHO05D032573 2.0e-08 65.1 66 57.6
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 2.0e-08 65.1 73 52.1
BolC4t28328H Brassica oleracea HOM05D007694 ORTHO05D040685 4.6e-08 63.9 51 66.7
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 1.0e-07 62.8 83 45.8
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 1.3e-07 62.4 85 49.4
C06p03760 Brassica napus HOM05D009832 ORTHO05D012823 2.3e-07 61.6 44 68.2
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 3.0e-07 61.2 83 44.6
C09p15890 Brassica napus HOM05D009681 ORTHO05D013235 3.9e-07 60.8 79 43.0
BcaC01g01501 Brassica carinata HOM05D007694 ORTHO05D023849 6.6e-07 60.1 70 52.9
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 6.6e-07 60.1 192 33.3
BcaC07g37747 Brassica carinata HOM05D007694 ORTHO05D019980 1.1e-06 59.3 58 56.9
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 1.5e-06 58.9 70 52.9
A10p16920 Brassica napus HOM05D000041 ORTHO05D000061 5.6e-06 57.0 43 69.8
BraA01t02818Z Brassica rapa HOM05D022130 ORTHO05D021584 5.6e-06 57.0 41 61.0


User provided reference genes

Program Settings