Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 5.4e-119 431.0 219 100.0
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 7.8e-118 427.2 219 99.1
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 7.8e-118 427.2 219 99.1
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.3e-109 399.1 219 92.2
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 9.5e-108 393.7 219 91.3
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 4.6e-62 241.9 229 59.4
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 4.6e-62 241.9 229 59.4
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.5e-60 236.1 228 58.8
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-56 223.8 224 56.2
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 6.7e-45 184.9 228 51.3
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.6e-41 172.9 142 62.7
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.2e-35 153.3 165 51.5
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 5.3e-34 148.7 109 70.6
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 9.1e-34 147.9 165 49.1
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.6e-33 146.4 135 54.8
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 1.0e-32 144.4 135 55.6
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 2.2e-32 143.3 191 45.5
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 2.2e-32 143.3 165 47.9
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 2.9e-32 142.9 188 46.3
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.0e-32 142.1 164 50.6
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-31 141.0 165 47.9
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 1.1e-31 141.0 165 47.9
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.5e-31 140.6 157 51.6
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-31 140.6 169 47.3
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-31 140.6 169 47.3
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-31 140.6 136 52.2
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.5e-31 139.8 166 45.2
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 4.2e-31 139.0 165 47.3
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.2e-31 138.3 117 59.8
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 2.7e-30 136.3 161 48.4
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 2.7e-30 136.3 161 48.4
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 2.7e-30 136.3 165 49.7
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 3.6e-30 136.0 188 44.1
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 6.1e-30 135.2 159 49.1
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 8.0e-30 134.8 197 41.6
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 8.0e-30 134.8 166 45.2
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 8.0e-30 134.8 197 41.6
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 8.0e-30 134.8 166 45.2
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 4.0e-29 132.5 197 42.6
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 6.7e-29 131.7 189 43.4
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 3.7e-27 125.9 142 50.0
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.8e-27 125.6 204 38.2
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 6.3e-27 125.2 189 43.9
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 9.1e-26 121.3 165 44.2
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.0e-25 120.2 164 44.5
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.7e-24 117.1 118 50.0
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 8.5e-24 114.8 157 45.2
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.2e-23 112.5 222 38.3
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 2.7e-22 109.8 177 36.7
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.0e-22 108.2 199 37.7
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-21 107.8 118 49.2
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-21 107.8 191 37.7
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 3.0e-21 106.3 128 47.7
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 2.0e-20 103.6 121 45.5
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 9.8e-20 101.3 135 41.5
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-19 100.9 136 41.2
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 1.3e-19 100.9 136 41.2
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 4.1e-18 95.9 122 45.1
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 5.4e-18 95.5 104 49.0
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-16 91.3 118 42.4
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.7e-16 90.5 169 36.7
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 5.5e-15 85.5 95 51.6
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 7.2e-15 85.1 147 37.4
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.6e-14 84.0 141 36.9
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 2.8e-14 83.2 189 33.9
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-12 77.8 198 33.3
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 2.6e-12 76.6 165 34.5
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 2.8e-11 73.2 154 34.4
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.7e-11 72.8 80 51.2
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.7e-08 63.9 93 39.8
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-08 63.9 102 37.3
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 3.3e-07 59.7 122 36.1
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 9.5e-07 58.2 103 36.9
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.8e-06 56.6 59 50.8
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.7e-06 55.8 69 46.4


User provided reference genes

Program Settings