Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p17130 Brassica napus HOM05D003336 ORTHO05D003807 3.6e-67 258.1 128 100.0
BolC1t01651H Brassica oleracea HOM05D003336 ORTHO05D003807 1.1e-66 256.5 128 99.2
C01p17060 Brassica napus HOM05D003336 ORTHO05D003807 7.9e-62 240.4 128 93.8
BolC1t01648H Brassica oleracea HOM05D003336 ORTHO05D003807 7.9e-62 240.4 128 93.8
C01p17090 Brassica napus HOM05D003336 ORTHO05D003807 2.3e-61 238.8 128 93.0
C01p17150 Brassica napus HOM05D003336 ORTHO05D003807 3.1e-58 228.4 129 89.1
BolC1t01652H Brassica oleracea HOM05D003336 ORTHO05D003807 3.1e-58 228.4 129 89.1
BcaC09g51089 Brassica carinata HOM05D003336 ORTHO05D003807 4.0e-58 228.0 129 88.4
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 8.7e-53 210.3 119 90.8
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 3.3e-52 208.4 119 89.9
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 3.3e-52 208.4 119 89.9
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 1.8e-50 202.6 116 87.9
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 9.0e-50 200.3 119 85.7
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 1.2e-49 199.9 116 87.1
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 1.3e-48 196.4 116 86.2
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 6.5e-48 194.1 116 84.5
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 1.4e-47 193.0 114 84.2
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 2.5e-47 192.2 116 82.8
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 9.3e-47 190.3 116 82.8
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 2.1e-46 189.1 115 82.6
BolC1t01646H Brassica oleracea HOM05D003336 ORTHO05D003807 1.8e-45 186.0 96 93.8
C01p17110 Brassica napus HOM05D003336 ORTHO05D003807 1.5e-44 183.0 99 90.9
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 5.7e-44 181.0 112 81.2
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 1.5e-41 172.9 105 81.9
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 7.7e-41 170.6 116 73.3
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 1.0e-40 170.2 106 80.2
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 1.3e-40 169.9 108 76.9
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.3e-40 169.9 111 75.7
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.3e-40 169.9 111 75.7
Eucgr.L00050 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.3e-40 169.9 111 75.7
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 1.3e-40 169.9 103 82.5
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 1.3e-40 169.9 105 80.0
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 1.3e-40 169.9 113 77.9
GSVIVG01006062001 Vitis vinifera HOM05D003336 ORTHO05D003807 1.3e-40 169.9 107 79.4
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.7e-40 169.5 104 81.7
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.9e-40 168.7 110 77.3
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.9e-40 168.7 110 77.3
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 3.8e-40 168.3 103 81.6
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 3.8e-40 168.3 117 76.1
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 5.0e-40 167.9 105 78.1
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 5.0e-40 167.9 107 78.5
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 5.0e-40 167.9 107 78.5
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 6.5e-40 167.5 105 79.0
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 6.5e-40 167.5 103 81.6
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 6.5e-40 167.5 103 81.6
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 6.5e-40 167.5 103 80.6
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 1.4e-39 166.4 103 80.6
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 1.4e-39 166.4 106 78.3
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 1.4e-39 166.4 106 78.3
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 1.4e-39 166.4 108 75.9
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 1.9e-39 166.0 103 80.6
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 2.5e-39 165.6 106 77.4
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 2.5e-39 165.6 105 79.0
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 2.5e-39 165.6 108 75.9
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 2.5e-39 165.6 108 75.9
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 3.2e-39 165.2 104 78.8
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 3.2e-39 165.2 103 80.6
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 3.2e-39 165.2 103 80.6
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 3.2e-39 165.2 114 73.7
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 3.2e-39 165.2 114 73.7
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 3.2e-39 165.2 103 80.6
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 4.2e-39 164.9 105 79.0
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 4.2e-39 164.9 111 73.0
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.2e-39 164.9 111 73.0
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.2e-39 164.9 111 73.0
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 4.2e-39 164.9 105 78.1
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 5.5e-39 164.5 105 79.0
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 5.5e-39 164.5 106 77.4
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 5.5e-39 164.5 106 77.4
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 5.5e-39 164.5 105 80.0
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 7.2e-39 164.1 105 79.0
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 7.2e-39 164.1 105 77.1
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 7.2e-39 164.1 107 75.7
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 7.2e-39 164.1 104 77.9
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 7.2e-39 164.1 106 76.4
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 7.2e-39 164.1 106 76.4
TAR365G0105 Trochodendron aralioides HOM05D003336 ORTHO05D003807 7.2e-39 164.1 106 77.4
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 9.4e-39 163.7 106 77.4
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 9.4e-39 163.7 104 78.8
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 9.4e-39 163.7 105 77.1
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.2e-38 163.3 107 75.7
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.2e-38 163.3 106 76.4
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.2e-38 163.3 111 72.1
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 1.2e-38 163.3 106 78.3
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 1.2e-38 163.3 105 77.1
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 1.6e-38 162.9 107 75.7
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 1.6e-38 162.9 104 78.8
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.6e-38 162.9 118 69.5
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.6e-38 162.9 118 69.5
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 1.6e-38 162.9 107 75.7
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 2.1e-38 162.5 106 76.4
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 2.1e-38 162.5 108 74.1
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 3.6e-38 161.8 98 76.5
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.6e-38 161.8 107 73.8
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 3.6e-38 161.8 104 76.9
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.6e-38 161.8 106 75.5
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 3.6e-38 161.8 117 72.6
Zm00001eb376450 Zea mays HOM05D003336 ORTHO05D003807 3.6e-38 161.8 105 75.2
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 4.6e-38 161.4 104 76.0
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 4.6e-38 161.4 106 76.4
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 4.6e-38 161.4 105 76.2
QL10p049056 Quercus lobata HOM05D003336 ORTHO05D003807 4.6e-38 161.4 106 75.5
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 4.6e-38 161.4 106 76.4
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 4.6e-38 161.4 103 78.6
Zm00001eb016890 Zea mays HOM05D003336 ORTHO05D003807 4.6e-38 161.4 105 76.2
Zm00001eb121330 Zea mays HOM05D003336 ORTHO05D003807 4.6e-38 161.4 105 76.2
Zm00001eb336440 Zea mays HOM05D003336 ORTHO05D003807 4.6e-38 161.4 105 76.2
Zm00001eb398700 Zea mays HOM05D003336 ORTHO05D003807 4.6e-38 161.4 105 76.2
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 1.4e-37 159.8 112 72.3
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.4e-37 159.8 107 75.7
Zm00001eb007550 Zea mays HOM05D003336 ORTHO05D003807 1.4e-37 159.8 105 75.2
Zm00001eb059340 Zea mays HOM05D003336 ORTHO05D003807 1.4e-37 159.8 105 75.2
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 1.8e-37 159.5 100 80.0
Zm00001eb324020 Zea mays HOM05D003336 ORTHO05D003807 3.9e-37 158.3 105 75.2
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 5.1e-37 157.9 115 70.4
Cc04_g08950 Coffea canephora HOM05D003336 ORTHO05D003807 6.7e-37 157.5 105 76.2
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 3.3e-36 155.2 112 70.5
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 4.3e-36 154.8 102 76.5
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 1.7e-35 152.9 105 73.3
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 1.7e-35 152.9 101 76.2
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 2.2e-35 152.5 108 74.1
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 2.8e-35 152.1 102 76.5
SEGI_39923 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 3.7e-35 151.8 97 77.3
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 1.0e-32 143.7 103 71.8
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 1.3e-32 143.3 95 74.7
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 3.8e-32 141.7 86 75.6
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 4.7e-30 134.8 101 70.3
CSS0001398 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.9e-30 134.0 98 70.4
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 5.7e-28 127.9 103 62.1
CSS0012442 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.1e-26 121.7 118 57.6
CSS0006022 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.7e-24 116.3 80 68.8
Zm00001eb191860 Zea mays HOM05D003336 ORTHO05D003807 2.2e-24 115.9 73 80.8
CSS0042404 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.5e-24 114.0 71 76.1
CSS0043766 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.5e-24 114.0 71 76.1
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 8.5e-24 114.0 76 75.0
Zm00001eb442100 Zea mays HOM05D003336 ORTHO05D003807 1.8e-21 106.3 105 57.1
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 4.0e-21 105.1 117 52.1
FAN13G1004 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.1e-20 103.6 62 79.0
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.5e-20 103.2 95 54.7
Ciclev10002827m.g Citrus clementina HOM05D003336 ORTHO05D003807 3.1e-18 95.5 69 72.5
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.2e-15 84.3 57 73.7
CSS0040953 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.7e-14 81.6 80 53.8
CSS0023275 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.5e-12 74.3 56 67.9
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 2.4e-10 69.3 46 78.3
Atru.chr7.305 Acer truncatum HOM05D003336 ORTHO05D003807 5.4e-10 68.2 66 53.0
C03p84370 Brassica napus HOM05D000924 ORTHO05D001209 7.7e-09 64.3 52 55.8
CSS0049342 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 8.5e-08 60.8 71 46.5
Atru.chr7.309 Acer truncatum HOM05D003336 ORTHO05D003807 1.1e-07 60.5 62 50.0


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