Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p16340 Brassica napus HOM05D008262 ORTHO05D010389 2.8e-72 275.4 160 100.0
BolC1t01585H Brassica oleracea HOM05D008262 ORTHO05D010389 2.8e-72 275.4 160 100.0
A01p13510 Brassica napus HOM05D008262 ORTHO05D010389 3.4e-70 268.5 160 97.5
BraA01t01292Z Brassica rapa HOM05D008262 ORTHO05D010389 3.4e-70 268.5 160 97.5
BcaC09g51156 Brassica carinata HOM05D008262 ORTHO05D010389 1.5e-49 199.9 115 100.0
BcaNung03758 Brassica carinata HOM05D008262 ORTHO05D010389 8.4e-45 184.1 162 72.8
Sp7g20320 Schrenkiella parvula HOM05D008262 ORTHO05D010389 8.7e-42 174.1 176 67.6
AL7G31530 Arabidopsis lyrata HOM05D008262 ORTHO05D010389 3.1e-39 165.6 174 69.0
CARHR228990 Cardamine hirsuta HOM05D008262 ORTHO05D010389 3.2e-36 155.6 157 68.8
AT4G22160 Arabidopsis thaliana HOM05D008262 ORTHO05D010389 4.3e-33 145.2 163 64.4
Thhalv10026500m.g Eutrema salsugineum HOM05D008262 ORTHO05D010389 1.0e-26 124.0 150 59.3
Carub.0007s1916 Capsella rubella HOM05D008262 ORTHO05D010389 2.6e-22 109.4 138 58.7
Hma1.2p1_1358F.1_g278000 Hydrangea macrophylla HOM05D008262 ORTHO05D010389 1.8e-15 86.7 133 50.4
Dinv20108 Davidia involucrata HOM05D008262 ORTHO05D010389 3.4e-14 82.4 130 49.2
GSVIVG01004813001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.4e-12 77.0 121 51.2
Thecc.06G228300 Theobroma cacao HOM05D008262 ORTHO05D010389 1.6e-11 73.6 145 44.8
Ciclev10017034m.g Citrus clementina HOM05D008262 ORTHO05D010389 2.1e-11 73.2 140 42.9
vmacro15804 Vaccinium macrocarpon HOM05D008262 ORTHO05D010389 2.1e-11 73.2 97 50.5
Cpa.g.c34179.2 Carica papaya HOM05D008262 ORTHO05D010389 6.1e-11 71.6 70 65.7
PSO210G6064 Papaver somniferum HOM05D008262 ORTHO05D010389 1.3e-10 70.5 136 40.4
GSVIVG01004816001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.3e-10 70.5 112 51.8
Actinidia39261 Actinidia chinensis HOM05D008262 ORTHO05D010389 1.8e-10 70.1 135 45.2
Duzib160G0751 Durio zibethinus HOM05D008262 ORTHO05D010389 1.8e-10 70.1 143 44.1
Gohir.D06G157400 Gossypium hirsutum HOM05D008262 ORTHO05D010389 1.8e-10 70.1 143 43.4
Gorai.010G183900 Gossypium raimondii HOM05D008262 ORTHO05D010389 3.9e-10 68.9 143 43.4
TAR626G1083 Trochodendron aralioides HOM05D008262 ORTHO05D010389 5.1e-10 68.6 108 50.0
MD10G1326900 Malus domestica HOM05D008262 ORTHO05D010389 8.7e-10 67.8 130 44.6
Rhsim02G0104900 Rhododendron simsii HOM05D008262 ORTHO05D010389 8.7e-10 67.8 115 47.0
Cfa000160 Carpinus fangiana HOM05D008262 ORTHO05D010389 1.5e-09 67.0 132 44.7
PSO832G2202 Papaver somniferum HOM05D008262 ORTHO05D010389 1.5e-09 67.0 136 39.0
Potri.004G004100 Populus trichocarpa HOM05D008262 ORTHO05D010389 3.3e-09 65.9 151 36.4
Haze_06858 Corylus avellana HOM05D008262 ORTHO05D010389 1.3e-08 63.9 118 46.6
Lsat_1_v5_gn_7_14921 Lactuca sativa HOM05D008262 ORTHO05D010389 1.6e-08 63.5 152 39.5
RcHm_v2.0_Chr5g0002091 Rosa chinensis HOM05D008262 ORTHO05D010389 2.2e-08 63.2 88 47.7
FAN04G2856 Fragaria x ananassa HOM05D008262 ORTHO05D010389 3.7e-08 62.4 88 52.3
Gohir.A06G151200 Gossypium hirsutum HOM05D008262 ORTHO05D010389 3.7e-08 62.4 143 41.3
Prupe.4G015100 Prunus persica HOM05D008262 ORTHO05D010389 4.8e-08 62.0 135 40.0
CANSAT56G3510 Cannabis sativa HOM05D008262 ORTHO05D010389 6.3e-08 61.6 167 35.9
CANSAT56G4204 Cannabis sativa HOM05D008262 ORTHO05D010389 6.3e-08 61.6 167 35.9
CsaV3_6G048720 Cucumis sativus L. HOM05D008262 ORTHO05D010389 8.2e-08 61.2 134 41.8
FAN13G3130 Fragaria x ananassa HOM05D008262 ORTHO05D010389 8.2e-08 61.2 83 48.2
ClCG01G021670 Citrullus lanatus HOM05D008262 ORTHO05D010389 1.1e-07 60.8 122 43.4
Potri.006G270200 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.8e-07 60.1 128 42.2
Potri.011G011400 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.8e-07 60.1 128 42.2
FvH4_5g10500 Fragaria vesca HOM05D008262 ORTHO05D010389 3.1e-07 59.3 88 45.5
FAN18G3649 Fragaria x ananassa HOM05D008262 ORTHO05D010389 3.1e-07 59.3 88 45.5
Nn1g07277 Nelumbo nucifera HOM05D008262 ORTHO05D010389 5.3e-07 58.5 102 49.0
FAN08G2823 Fragaria x ananassa HOM05D008262 ORTHO05D010389 6.9e-07 58.2 96 43.8
Sed0027045 Sechium edule HOM05D008262 ORTHO05D010389 9.0e-07 57.8 164 34.1
QL05p071877 Quercus lobata HOM05D008262 ORTHO05D010389 4.5e-06 55.5 131 41.2


User provided reference genes

Program Settings