Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 1.7e-108 396.0 198 100.0
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 5.1e-76 288.1 179 84.9
C03p72200 Brassica napus HOM05D003240 ORTHO05D032152 1.4e-54 216.9 116 92.2
BolC3t19516H Brassica oleracea HOM05D003240 ORTHO05D032152 1.4e-54 216.9 116 92.2
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 1.1e-43 180.6 187 58.3
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 1.5e-40 170.2 189 56.6
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 7.7e-40 167.9 190 57.9
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 7.7e-40 167.9 190 57.9
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 6.5e-39 164.9 200 57.0
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 8.5e-39 164.5 169 58.6
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 8.5e-39 164.5 200 55.5
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 2.5e-38 162.9 139 68.3
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 5.5e-38 161.8 169 57.4
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 9.4e-38 161.0 187 54.0
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 1.2e-37 160.6 191 56.0
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 7.9e-37 157.9 198 52.5
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 1.8e-36 156.8 195 53.8
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 2.3e-36 156.4 191 55.5
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 3.9e-36 155.6 141 65.2
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 3.3e-35 152.5 199 51.8
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 3.3e-35 152.5 199 51.8
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 4.4e-35 152.1 198 51.0
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 2.8e-34 149.4 194 54.1
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 1.8e-33 146.7 194 54.1
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 4.1e-33 145.6 186 53.8
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 5.3e-33 145.2 198 49.5
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 1.6e-32 143.7 175 57.1
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 1.6e-32 143.7 198 52.0
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 1.6e-32 143.7 175 57.1
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 4.5e-32 142.1 199 50.8
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 4.5e-32 142.1 199 50.8
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 1.7e-31 140.2 138 60.1
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 2.9e-31 139.4 194 52.6
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 5.0e-31 138.7 164 56.1
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 6.5e-31 138.3 187 53.5
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 1.9e-30 136.7 164 57.3
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 5.5e-30 135.2 156 53.8
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 5.5e-30 135.2 156 53.8
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 7.2e-30 134.8 150 58.0
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 5.2e-28 128.6 150 57.3
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 6.7e-28 128.3 174 52.3
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 3.3e-27 125.9 135 60.7
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 3.7e-26 122.5 131 60.3
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 1.4e-25 120.6 199 50.3
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 1.8e-25 120.2 199 50.3
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 1.6e-24 117.1 142 56.3
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 4.5e-24 115.5 121 62.8
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 7.7e-24 114.8 109 67.0
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 7.2e-22 108.2 122 62.3
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 1.2e-21 107.5 160 53.1
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 8.0e-21 104.8 132 53.8
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 8.0e-21 104.8 132 53.8
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 5.2e-20 102.1 159 45.9
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 2.0e-19 100.1 130 54.6
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 4.4e-19 99.0 159 45.9
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 2.2e-18 96.7 160 45.6
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 4.8e-18 95.5 130 53.1
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 4.8e-18 95.5 130 53.1
BolC7t42862H Brassica oleracea HOM05D003240 ORTHO05D017535 4.8e-18 95.5 132 51.5
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 8.3e-18 94.7 130 51.5
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 1.4e-17 94.0 161 47.2
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 2.4e-17 93.2 152 42.8
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 3.1e-17 92.8 151 42.4
C07p23280 Brassica napus HOM05D003240 ORTHO05D100423 3.1e-17 92.8 132 50.8
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 3.1e-17 92.8 161 40.4
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 4.1e-17 92.4 130 51.5
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 7.0e-17 91.7 181 39.8
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 7.0e-17 91.7 160 46.9
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.6e-16 90.5 159 42.8
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 2.0e-16 90.1 161 45.3
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 5.9e-16 88.6 159 42.1
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 5.9e-16 88.6 161 45.3
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 5.9e-16 88.6 161 45.3
BolC5t34528H Brassica oleracea HOM05D003240 ORTHO05D019881 1.0e-15 87.8 80 63.8
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 1.3e-15 87.4 124 53.2
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 1.7e-15 87.0 156 44.2
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 2.2e-15 86.7 161 43.5
C05p58750 Brassica napus HOM05D003240 ORTHO05D019881 3.8e-15 85.9 80 63.8
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 3.8e-15 85.9 170 42.4
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 5.0e-15 85.5 148 46.6
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 5.0e-15 85.5 161 43.5
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 5.0e-15 85.5 160 45.6
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 6.5e-15 85.1 164 43.9
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 8.5e-15 84.7 161 42.9
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 1.1e-14 84.3 163 44.2
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 1.1e-14 84.3 160 45.0
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 1.5e-14 84.0 128 53.1
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 1.9e-14 83.6 167 41.3
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 2.5e-14 83.2 162 44.4
C09p56640 Brassica napus HOM05D003240 ORTHO05D103622 9.4e-14 81.3 104 52.9
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 9.4e-14 81.3 160 40.6
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 1.6e-13 80.5 149 40.3
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 2.7e-13 79.7 157 43.9
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 2.7e-13 79.7 157 43.9
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 3.6e-13 79.3 106 54.7
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 8.0e-13 78.2 175 38.3
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 3.0e-12 76.3 141 46.1
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 5.2e-12 75.5 91 52.7
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 5.2e-12 75.5 163 39.3
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 5.2e-12 75.5 163 39.9
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 5.2e-12 75.5 163 39.9
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 5.2e-12 75.5 175 37.7
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 8.8e-12 74.7 91 50.5
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 8.8e-12 74.7 95 51.6
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 1.2e-11 74.3 161 41.6
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 3.4e-11 72.8 163 39.9
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 4.4e-11 72.4 135 42.2
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 4.4e-11 72.4 175 36.6
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 4.4e-11 72.4 135 42.2
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 5.7e-11 72.0 102 48.0
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 5.7e-11 72.0 172 37.2
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 7.5e-11 71.6 126 42.1
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 7.5e-11 71.6 159 43.4
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 1.3e-10 70.9 124 47.6
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 2.2e-10 70.1 127 48.0
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 2.2e-10 70.1 104 52.9
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 2.8e-10 69.7 97 52.6
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 3.7e-10 69.3 86 53.5
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 4.9e-10 68.9 88 54.5
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 4.9e-10 68.9 176 36.4
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 6.3e-10 68.6 175 35.4
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 6.3e-10 68.6 104 51.9
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 8.3e-10 68.2 148 43.9
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 8.3e-10 68.2 175 36.6
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 8.3e-10 68.2 149 40.9
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 8.3e-10 68.2 175 36.6
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 1.1e-09 67.8 135 39.3
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 1.1e-09 67.8 90 52.2
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 1.4e-09 67.4 126 44.4
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 1.4e-09 67.4 128 47.7
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 1.8e-09 67.0 98 51.0
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 1.8e-09 67.0 156 37.2
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 1.8e-09 67.0 132 41.7
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 2.4e-09 66.6 95 51.6
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 4.1e-09 65.9 104 51.9
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 4.1e-09 65.9 165 38.2
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 4.1e-09 65.9 104 51.0
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 4.1e-09 65.9 142 41.5
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 4.1e-09 65.9 142 41.5
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 7.0e-09 65.1 146 43.2
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 7.0e-09 65.1 127 41.7
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 9.2e-09 64.7 170 36.5
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 1.2e-08 64.3 165 40.0
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 1.2e-08 64.3 165 40.0
A07p12250 Brassica napus HOM05D003240 ORTHO05D102247 1.2e-08 64.3 46 71.7
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 1.6e-08 63.9 162 40.7
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.6e-08 63.9 164 37.2
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 2.0e-08 63.5 190 37.9
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 5.9e-08 62.0 72 56.9
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 7.7e-08 61.6 142 41.5
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 7.7e-08 61.6 126 40.5
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 1.3e-07 60.8 157 38.9
C06p51590 Brassica napus HOM05D003240 ORTHO05D103766 1.3e-07 60.8 126 38.9
C08p50480 Brassica napus HOM05D003240 ORTHO05D101800 2.3e-07 60.1 112 49.1
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 2.3e-07 60.1 75 56.0
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 2.9e-07 59.7 95 44.2
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 2.9e-07 59.7 62 62.9
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 3.8e-07 59.3 80 51.2
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 5.0e-07 58.9 142 35.9
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 5.0e-07 58.9 143 40.6
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 5.0e-07 58.9 161 36.6
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 6.6e-07 58.5 143 39.9
BcaC08g46075 Brassica carinata HOM05D003240 ORTHO05D019967 1.1e-06 57.8 127 35.4
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 1.5e-06 57.4 97 49.5
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 1.5e-06 57.4 68 58.8
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 1.5e-06 57.4 63 58.7
BolC5t29061H Brassica oleracea HOM05D010893 ORTHO05D032720 3.3e-06 56.2 62 61.3
C05p19960 Brassica napus HOM05D003240 ORTHO05D019967 9.5e-06 54.7 111 35.1


User provided reference genes

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