Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 0.0e+00 1562.7 785 100.0
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 0.0e+00 1532.3 785 98.5
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 0.0e+00 1513.8 785 97.1
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 0.0e+00 1511.1 785 96.8
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 0.0e+00 1498.0 810 94.4
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 0.0e+00 1381.3 786 89.3
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 0.0e+00 1368.2 786 87.2
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 0.0e+00 1360.9 786 87.5
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 0.0e+00 1358.6 786 88.0
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 0.0e+00 1347.4 786 86.6
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 0.0e+00 1345.5 786 86.0
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 0.0e+00 1324.3 776 84.7
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 0.0e+00 1268.8 783 80.7
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 0.0e+00 1087.0 786 69.2
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 0.0e+00 1087.0 786 69.2
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 0.0e+00 1082.0 791 68.0
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 0.0e+00 1077.4 781 69.1
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 0.0e+00 1075.1 778 68.4
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 0.0e+00 1075.1 780 69.5
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 5.4e-312 1073.9 782 68.8
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 8.1e-311 1070.1 787 67.9
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 8.1e-311 1070.1 786 67.7
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 1.2e-309 1066.2 781 67.9
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 4.5e-309 1064.3 786 68.7
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 2.9e-308 1061.6 785 67.5
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 3.8e-308 1061.2 786 67.4
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 8.5e-308 1060.1 804 66.8
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 5.5e-307 1057.4 786 67.6
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 9.4e-307 1056.6 789 66.9
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 1.6e-306 1055.8 786 67.0
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 1.5e-304 1049.3 788 67.4
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.3e-304 1048.1 796 66.7
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.3e-303 1046.2 787 65.9
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 1.4e-302 1042.7 781 66.6
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 2.4e-302 1042.0 790 65.2
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 2.4e-302 1042.0 783 66.8
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 7.7e-301 1036.9 782 66.8
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 2.5e-299 1031.9 781 65.4
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 9.4e-299 1030.0 786 65.4
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 2.7e-298 1028.5 787 64.0
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 2.7e-298 1028.5 780 65.4
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.1e-294 1016.5 785 65.7
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 1.4e-294 1016.1 759 67.6
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 1.8e-294 1015.8 786 65.4
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 4.1e-294 1014.6 812 62.1
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 9.1e-294 1013.4 777 64.5
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 1.2e-293 1013.1 788 64.3
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 5.0e-292 1007.7 887 59.5
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 1.5e-291 1006.1 785 63.2
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 2.0e-288 995.7 772 65.0
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 2.0e-288 995.7 863 59.6
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.7e-287 992.6 783 63.9
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 2.8e-287 991.9 781 64.1
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 1.1e-286 989.9 785 62.9
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 2.4e-286 988.8 785 62.7
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 3.1e-286 988.4 781 63.9
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 5.3e-286 987.6 782 62.8
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 5.3e-286 987.6 791 62.1
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 8.5e-284 980.3 780 63.8
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 1.8e-281 972.6 786 62.5
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 4.1e-278 961.4 785 61.5
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.6e-277 959.5 786 62.0
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 2.9e-276 955.3 781 62.6
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 3.8e-276 954.9 785 61.3
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 8.5e-276 953.7 787 60.4
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 1.5e-275 953.0 786 61.8
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.5e-275 952.2 784 60.3
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 4.2e-275 951.4 782 62.5
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 5.5e-275 951.0 507 94.7
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 5.5e-275 951.0 784 60.2
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 1.6e-274 949.5 790 62.7
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 6.1e-274 947.6 845 57.9
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 1.5e-272 943.0 745 65.0
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 2.0e-272 942.6 789 60.6
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 9.8e-272 940.3 780 60.9
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 1.7e-271 939.5 789 60.1
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 3.7e-271 938.3 782 61.4
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 8.6e-268 927.2 786 59.5
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 1.2e-266 923.3 595 81.0
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 2.6e-264 915.6 722 65.0
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 6.4e-263 911.0 886 55.0
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 3.0e-260 902.1 787 58.8
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 7.8e-253 877.5 755 58.1
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 5.0e-252 874.8 794 57.4
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.1e-245 852.8 787 55.1
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 3.1e-241 839.0 799 54.1
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 7.6e-240 834.3 786 55.0
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 9.2e-238 827.4 786 56.2
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 1.0e-212 744.2 784 49.2
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 3.2e-198 696.0 538 65.6
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.5e-192 677.2 540 63.5
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 1.0e-180 637.9 482 66.6
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 8.8e-180 634.8 791 45.8
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.7e-170 602.8 435 67.1
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 3.8e-151 539.7 806 40.0
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 3.0e-148 530.0 800 39.6
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.8e-140 504.2 404 63.4
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 4.3e-134 483.0 451 62.7
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 2.3e-132 477.2 514 49.6
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 1.1e-129 468.4 456 60.3
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 4.1e-121 439.9 506 50.4
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 9.0e-116 422.2 379 63.9
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 3.6e-109 400.2 756 33.9
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 1.2e-104 385.2 853 30.6
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 1.2e-96 358.6 378 51.1
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.0e-83 314.7 256 60.9
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 1.3e-77 295.4 190 70.0
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea HOM05D004656 ORTHO05D005404 1.7e-77 295.0 265 54.7
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.9e-73 281.6 187 75.4
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 1.4e-68 265.4 397 38.3
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 3.8e-66 257.3 235 55.7
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 1.5e-54 218.8 774 26.2
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 1.5e-46 192.2 174 62.6
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 4.5e-43 180.6 234 42.7
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 3.6e-40 171.0 320 35.0
SHI02121 Sapria himalayana HOM05D004656 ORTHO05D005404 2.0e-35 155.2 252 37.3
PRCOL_00000091 Prasinoderma coloniale HOM05D004656 ORTHO05D005404 1.3e-34 152.5 464 25.2
Os02g0785900 Oryza sativa ssp. japonica HOM05D004656 ORTHO05D005404 8.6e-34 149.8 130 56.2
MCO05G135 Micromonas commoda HOM05D004656 ORTHO05D005404 5.2e-31 140.6 513 25.9
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 7.5e-30 136.7 163 47.9
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 1.1e-28 132.9 86 70.9
TAR369G0180 Trochodendron aralioides HOM05D004656 ORTHO05D005404 4.1e-28 131.0 67 86.6
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 2.7e-27 128.3 102 63.7
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 1.7e-26 125.6 84 71.4
Cre12.g556650 Chlamydomonas reinhardtii HOM05D004656 ORTHO05D005404 3.9e-26 124.4 515 23.5
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 3.9e-26 124.4 109 50.5
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 6.6e-26 123.6 87 64.4
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.3e-25 121.3 87 64.4
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 5.6e-25 120.6 109 49.5
Eucgr.C00045 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.3e-25 120.2 84 70.2
CSS0005991 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.1e-24 118.6 105 51.4
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.8e-24 118.2 120 51.7
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.0e-22 112.1 87 59.8
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 9.8e-22 109.8 75 68.0
Zm00001eb374130 Zea mays HOM05D004656 ORTHO05D005404 3.7e-21 107.8 56 80.4
Hma1.2p1_0144F.1_g064710 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 4.9e-21 107.5 62 80.6
Haze_06207 Corylus avellana HOM05D004656 ORTHO05D005404 2.1e-19 102.1 52 88.5
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 3.5e-19 101.3 153 41.2
MELO3C032683.2 Cucumis melo HOM05D004656 ORTHO05D005404 9.5e-17 93.2 52 78.8
SHI02114 Sapria himalayana HOM05D004656 ORTHO05D005404 1.2e-16 92.8 72 56.9
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 2.8e-16 91.7 137 43.1
Hma1.2p1_1241F.1_g269830 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 3.1e-15 88.2 62 69.4
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 2.0e-14 85.5 55 65.5
Zm00001eb266270 Zea mays HOM05D004656 ORTHO05D005404 2.2e-13 82.0 80 47.5
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 4.1e-12 77.8 55 65.5
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 4.1e-12 77.8 55 65.5
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.6e-11 75.9 87 50.6
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.7e-10 72.4 55 54.5
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.9e-10 71.2 73 46.6
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.9e-10 71.2 83 42.2
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.3e-09 68.2 77 46.8
Actinidia29288 Actinidia chinensis HOM05D004656 ORTHO05D005404 1.1e-07 63.2 31 90.3
SHI02119 Sapria himalayana HOM05D004656 ORTHO05D005404 1.1e-07 63.2 46 65.2
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.0e-07 61.2 87 39.1


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