Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p15210 Brassica napus HOM05D000682 ORTHO05D000510 8.5e-34 146.4 70 100.0
AT4G21250 Arabidopsis thaliana HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
BcaC09g51240 Brassica carinata HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
BcaNung03830 Brassica carinata HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
A01p12610 Brassica napus HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
C01p15180 Brassica napus HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
BolC1t01468H Brassica oleracea HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
BraA01t01205Z Brassica rapa HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
CARHR227840 Cardamine hirsuta HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
Thhalv10025170m.g Eutrema salsugineum HOM05D000682 ORTHO05D000510 3.5e-11 71.2 36 88.9
AL7G32850 Arabidopsis lyrata HOM05D000682 ORTHO05D000510 7.7e-11 70.1 36 86.1
Carub.0007s2017 Capsella rubella HOM05D000682 ORTHO05D000510 1.0e-10 69.7 36 86.1
THA.LOC104813356 Tarenaya hassleriana HOM05D000682 ORTHO05D000510 2.2e-10 68.6 36 83.3
Sp7g19340 Schrenkiella parvula HOM05D000682 ORTHO05D000510 3.8e-10 67.8 36 83.3
Aa31LG6G3260 Aethionema arabicum HOM05D000682 ORTHO05D000510 6.5e-10 67.0 69 55.1
Prupe.4G028900 Prunus persica HOM05D000682 ORTHO05D000510 9.4e-09 63.2 33 84.8
CiPaw.09G080800 Carya illinoinensis HOM05D000682 ORTHO05D000510 1.2e-08 62.8 33 81.8
CSS0024951 Camellia sinensis var. sinensis HOM05D000682 ORTHO05D000510 1.6e-08 62.4 36 77.8
QL05p077124 Quercus lobata HOM05D000682 ORTHO05D000510 1.6e-08 62.4 32 81.2
QL93p0073_1211 Quercus lobata HOM05D000682 ORTHO05D000510 1.6e-08 62.4 32 81.2
Sabra11G0023900 Salix brachista HOM05D000682 ORTHO05D000510 3.6e-08 61.2 33 75.8
THA.LOC104818905 Tarenaya hassleriana HOM05D000682 ORTHO05D000510 1.0e-07 59.7 33 75.8
COL.COLO4_31690 Corchorus olitorius HOM05D000682 ORTHO05D000510 1.4e-07 59.3 33 81.8
Lj2A275G33 Lonicera japonica HOM05D000682 ORTHO05D000510 1.4e-07 59.3 33 78.8
Oeu051230.1 Olea europaea HOM05D000682 ORTHO05D000510 1.4e-07 59.3 36 69.4
AT1G61740 Arabidopsis thaliana HOM05D000682 ORTHO05D000510 1.8e-07 58.9 33 75.8
Carub.0002s0333 Capsella rubella HOM05D000682 ORTHO05D000510 1.8e-07 58.9 33 75.8
CARHR050600 Cardamine hirsuta HOM05D000682 ORTHO05D000510 1.8e-07 58.9 33 75.8
Potri.011G030900 Populus trichocarpa HOM05D000682 ORTHO05D000510 1.8e-07 58.9 33 75.8
AL2G14380 Arabidopsis lyrata HOM05D000682 ORTHO05D000510 2.3e-07 58.5 33 75.8
Cpa.g.sc81.12 Carica papaya HOM05D000682 ORTHO05D000510 2.3e-07 58.5 33 75.8
Cc02_g11740 Coffea canephora HOM05D000682 ORTHO05D000510 2.3e-07 58.5 33 75.8
Migut.H01544 Erythranthe guttata HOM05D000682 ORTHO05D000510 2.3e-07 58.5 36 69.4
SGA_v2.0_scaffold89G27440 Striga asiatica HOM05D000682 ORTHO05D000510 2.3e-07 58.5 36 69.4
CiPaw.10G066800 Carya illinoinensis HOM05D000682 ORTHO05D000510 3.0e-07 58.2 33 78.8
Nitab4.5_0002345g0010 Nicotiana tabacum HOM05D000682 ORTHO05D000510 3.0e-07 58.2 33 72.7
TAR624G1371 Trochodendron aralioides HOM05D000682 ORTHO05D000510 3.0e-07 58.2 36 69.4
Gohir.A05G167900 Gossypium hirsutum HOM05D000682 ORTHO05D000510 4.0e-07 57.8 36 72.2
RcHm_v2.0_Chr5g0004461 Rosa chinensis HOM05D000682 ORTHO05D000510 4.0e-07 57.8 33 75.8
SalBow1G6375 Salvia bowleyana HOM05D000682 ORTHO05D000510 4.0e-07 57.8 51 58.8
arahy.Tifrunner.gnm1.ann1.MPW62I Arachis hypogaea HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 75.8
arahy.Tifrunner.gnm1.ann1.VI2FPQ Arachis hypogaea HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 75.8
BcaB04g20367 Brassica carinata HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
A01p30600 Brassica napus HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
C01p38990 Brassica napus HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
BolC1t03849H Brassica oleracea HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
BraA01t03192Z Brassica rapa HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
CARHR011820 Cardamine hirsuta HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
COL.COLO4_20807 Corchorus olitorius HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 78.8
COL.COLO4_29247 Corchorus olitorius HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 78.8
Haze_06691 Corylus avellana HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
Migut.H01547 Erythranthe guttata HOM05D000682 ORTHO05D000510 5.2e-07 57.4 33 72.7
Solyc02g079980.3 Solanum lycopersicum HOM05D000682 ORTHO05D000510 5.2e-07 57.4 36 66.7
Atru.chr10.2108 Acer truncatum HOM05D000682 ORTHO05D000510 6.7e-07 57.0 33 75.8
Atru.chr10.2110 Acer truncatum HOM05D000682 ORTHO05D000510 6.7e-07 57.0 33 75.8
CAN.G569.60 Capsicum annuum HOM05D000682 ORTHO05D000510 6.7e-07 57.0 36 66.7
Duzib235G1270 Durio zibethinus HOM05D000682 ORTHO05D000510 6.7e-07 57.0 33 75.8
Lalb_Chr05g0218001 Lupinus albus HOM05D000682 ORTHO05D000510 6.7e-07 57.0 33 69.7
Sopen02g024730 Solanum pennellii HOM05D000682 ORTHO05D000510 6.7e-07 57.0 36 66.7
GSVIVG01007340001 Vitis vinifera HOM05D000682 ORTHO05D000510 6.7e-07 57.0 33 72.7
CAN.G783.5 Capsicum annuum HOM05D000682 ORTHO05D000510 8.8e-07 56.6 33 75.8
Dinv18923 Davidia involucrata HOM05D000682 ORTHO05D000510 8.8e-07 56.6 33 72.7
Dinv18938 Davidia involucrata HOM05D000682 ORTHO05D000510 8.8e-07 56.6 33 72.7
Gorai.011G018500 Gossypium raimondii HOM05D000682 ORTHO05D000510 8.8e-07 56.6 33 69.7
Nitab4.5_0009680g0010 Nicotiana tabacum HOM05D000682 ORTHO05D000510 8.8e-07 56.6 36 66.7
Psat1g211440 Pisum sativum HOM05D000682 ORTHO05D000510 8.8e-07 56.6 33 75.8
PGSC0003DMG400021728 Solanum tuberosum HOM05D000682 ORTHO05D000510 8.8e-07 56.6 33 69.7
Actinidia05540 Actinidia chinensis HOM05D000682 ORTHO05D000510 1.2e-06 56.2 35 65.7
Aa31LG2G9090 Aethionema arabicum HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 69.7
BcaB07g31282 Brassica carinata HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 69.7
BcaC04g22348 Brassica carinata HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 69.7
C09p20280 Brassica napus HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 69.7
BolC9t54933H Brassica oleracea HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 69.7
Cfa016413 Carpinus fangiana HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 69.7
Eucgr.D00851 Eucalyptus grandis HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 69.7
PGSC0003DMG400005071 Solanum tuberosum HOM05D000682 ORTHO05D000510 1.2e-06 56.2 33 72.7
A09p16660 Brassica napus HOM05D000682 ORTHO05D000510 1.5e-06 55.8 33 66.7
BraA09t37305Z Brassica rapa HOM05D000682 ORTHO05D000510 1.5e-06 55.8 33 66.7
Gohir.A10G016500 Gossypium hirsutum HOM05D000682 ORTHO05D000510 1.5e-06 55.8 33 69.7
Gohir.D05G170900 Gossypium hirsutum HOM05D000682 ORTHO05D000510 1.5e-06 55.8 36 69.4
Lalb_Chr16g0383231 Lupinus albus HOM05D000682 ORTHO05D000510 1.5e-06 55.8 33 66.7
Solyc03g031530.4 Solanum lycopersicum HOM05D000682 ORTHO05D000510 1.5e-06 55.8 33 72.7
TPR.G32661 Trifolium pratense HOM05D000682 ORTHO05D000510 1.5e-06 55.8 33 72.7
Gohir.D10G016600 Gossypium hirsutum HOM05D000682 ORTHO05D000510 2.0e-06 55.5 33 66.7
Medtr2g010740 Medicago truncatula HOM05D000682 ORTHO05D000510 2.0e-06 55.5 33 75.8
Peaxi162Scf00781g00031 Petunia axillaris HOM05D000682 ORTHO05D000510 2.0e-06 55.5 33 72.7
Aa31LG1G3220 Aethionema arabicum HOM05D000682 ORTHO05D000510 2.6e-06 55.1 33 72.7
CANSAT56G0871 Cannabis sativa HOM05D000682 ORTHO05D000510 2.6e-06 55.1 33 72.7
Carub.0001s1115 Capsella rubella HOM05D000682 ORTHO05D000510 2.6e-06 55.1 33 69.7
Thhalv10023449m.g Eutrema salsugineum HOM05D000682 ORTHO05D000510 2.6e-06 55.1 33 69.7
arahy.Tifrunner.gnm1.ann1.DJ1GHW Arachis hypogaea HOM05D000682 ORTHO05D000510 3.3e-06 54.7 33 69.7
Ciclev10015151m.g Citrus clementina HOM05D000682 ORTHO05D000510 3.3e-06 54.7 33 69.7
Haze_06692 Corylus avellana HOM05D000682 ORTHO05D000510 3.3e-06 54.7 31 74.2
Duzib192G0116 Durio zibethinus HOM05D000682 ORTHO05D000510 3.3e-06 54.7 33 72.7
Lj6g0021175 Lotus japonicus HOM05D000682 ORTHO05D000510 3.3e-06 54.7 33 72.7
MD05G1336700 Malus domestica HOM05D000682 ORTHO05D000510 3.3e-06 54.7 33 69.7
Glyma.13G251400 Glycine max HOM05D000682 ORTHO05D000510 4.4e-06 54.3 33 69.7
Lj4g0012888 Lotus japonicus HOM05D000682 ORTHO05D000510 4.4e-06 54.3 36 61.1
Nn1g06965 Nelumbo nucifera HOM05D000682 ORTHO05D000510 4.4e-06 54.3 33 63.6
Sopen03g005420 Solanum pennellii HOM05D000682 ORTHO05D000510 4.4e-06 54.3 33 69.7
Thecc.06G208900 Theobroma cacao HOM05D000682 ORTHO05D000510 5.7e-06 53.9 33 72.7
AT1G11540 Arabidopsis thaliana HOM05D000682 ORTHO05D000510 7.5e-06 53.5 33 66.7
arahy.Tifrunner.gnm1.ann1.0BBN6W Arachis hypogaea HOM05D000682 ORTHO05D000510 7.5e-06 53.5 33 66.7
Thhalv10007599m.g Eutrema salsugineum HOM05D000682 ORTHO05D000510 7.5e-06 53.5 33 69.7
Phvul.006G196700 Phaseolus vulgaris HOM05D000682 ORTHO05D000510 7.5e-06 53.5 33 72.7
vmacro03735 Vaccinium macrocarpon HOM05D000682 ORTHO05D000510 7.5e-06 53.5 36 63.9
Ca_00204_v3 Cicer arietinum L. HOM05D000682 ORTHO05D000510 9.7e-06 53.1 33 69.7
DCAR_004179 Daucus carota HOM05D000682 ORTHO05D000510 9.7e-06 53.1 33 69.7


User provided reference genes

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