Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p14590 Brassica napus HOM05D000353 ORTHO05D016112 3.2e-44 181.4 93 100.0
C07p10830 Brassica napus HOM05D000353 ORTHO05D016112 3.7e-37 157.9 81 96.3
BcaC09g51304 Brassica carinata HOM05D000353 ORTHO05D016112 4.9e-37 157.5 89 89.9
BolC4t23475H Brassica oleracea HOM05D000353 ORTHO05D016112 1.9e-28 129.0 84 79.8
C04p19430 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-28 128.6 84 77.4
BcaC01g05296 Brassica carinata HOM05D000353 ORTHO05D000174 7.1e-28 127.1 130 56.9
C04p68510 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-28 126.7 80 78.8
BcaC02g10189 Brassica carinata HOM05D000353 ORTHO05D000174 5.2e-23 110.9 80 66.2
C06p11830 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-20 103.2 131 48.1
BolC7t46221H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-20 101.3 131 47.3
C07p57540 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-19 98.2 131 46.6
BcaNung00522 Brassica carinata HOM05D000353 ORTHO05D000174 4.3e-17 91.3 150 41.3
C04p31750 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-13 77.8 150 34.7
C07p41190 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-13 77.8 150 34.7
BolC4t24724H Brassica oleracea HOM05D000353 ORTHO05D000174 4.9e-13 77.8 150 34.7
BolC1t03579H Brassica oleracea HOM05D000353 ORTHO05D000174 8.4e-13 77.0 150 34.7
A03p64530 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-12 76.6 150 34.7
C07p13750 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-12 76.6 150 34.0
BraA03t15520Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-12 76.6 150 34.7
C03p86410 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-12 75.9 150 34.7
BcaB05g22568 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-12 75.5 150 34.0
BcaC08g44937 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-12 75.5 152 34.2
C09p40850 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-12 75.1 152 34.9
BolC9t56965H Brassica oleracea HOM05D000353 ORTHO05D000174 3.2e-12 75.1 152 34.9
BraA06t27230Z Brassica rapa HOM05D000353 ORTHO05D000174 5.4e-12 74.3 151 35.1
C02p21690 Brassica napus HOM05D019267 ORTHO05D016112 1.2e-11 73.2 47 74.5
C08p02880 Brassica napus HOM05D019267 ORTHO05D016112 1.2e-11 73.2 47 74.5
A02p20560 Brassica napus HOM05D019267 ORTHO05D016112 1.6e-11 72.8 47 74.5
C06p25630 Brassica napus HOM05D019267 ORTHO05D016112 4.6e-11 71.2 47 72.3
C09p44150 Brassica napus HOM05D019267 ORTHO05D016112 4.6e-11 71.2 47 72.3
C04p55780 Brassica napus HOM05D000353 ORTHO05D000174 6.0e-11 70.9 43 74.4
C06p10170 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-10 70.1 89 44.9
BcaC05g28967 Brassica carinata HOM05D000353 ORTHO05D000174 6.6e-10 67.4 158 31.0
BraSC39t46206Z Brassica rapa HOM05D019267 ORTHO05D016112 2.5e-09 65.5 47 66.0
C09p45620 Brassica napus HOM05D001434 ORTHO05D004586 5.6e-09 64.3 69 46.4
A10p02600 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-07 58.5 82 43.9
C03p78650 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-06 56.2 82 42.7


User provided reference genes

Program Settings