Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 1.8e-66 255.8 127 100.0
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 1.8e-66 255.8 127 100.0
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 9.9e-65 250.0 127 97.6
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 6.0e-62 240.7 127 93.7
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 6.0e-62 240.7 127 93.7
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 4.9e-56 221.1 127 87.4
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 2.4e-50 202.2 127 80.3
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 1.1e-47 193.4 128 75.0
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 5.1e-45 184.5 127 72.4
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 1.1e-44 183.3 126 71.4
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 2.1e-43 179.1 127 74.8
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 1.8e-42 176.0 131 74.0
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 1.9e-36 156.0 127 66.9
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 1.9e-36 156.0 127 66.9
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 2.1e-14 82.8 104 51.0
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 2.1e-14 82.8 72 58.3
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 4.6e-14 81.6 110 46.4
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 6.1e-14 81.3 89 50.6
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 1.0e-13 80.5 95 52.6
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 1.0e-13 80.5 120 44.2
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 1.0e-13 80.5 97 47.4
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 3.0e-13 79.0 74 52.7
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 6.7e-13 77.8 79 49.4
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 1.9e-12 76.3 99 49.5
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 3.3e-12 75.5 92 45.7
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 3.3e-12 75.5 92 45.7
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 4.3e-12 75.1 69 62.3
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 5.7e-12 74.7 90 51.1
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 5.7e-12 74.7 93 49.5
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 7.4e-12 74.3 109 41.3
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 9.7e-12 73.9 124 38.7
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 1.3e-11 73.6 100 49.0
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 1.3e-11 73.6 96 49.0
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 1.7e-11 73.2 97 48.5
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 2.2e-11 72.8 90 45.6
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 2.8e-11 72.4 90 45.6
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 3.7e-11 72.0 72 54.2
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 4.8e-11 71.6 71 50.7
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 8.2e-11 70.9 111 44.1
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 1.1e-10 70.5 66 59.1
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 1.1e-10 70.5 79 51.9
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 1.1e-10 70.5 72 54.2
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 1.8e-10 69.7 83 47.0
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 1.8e-10 69.7 76 52.6
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 2.4e-10 69.3 113 41.6
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 3.1e-10 68.9 112 41.1
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 4.1e-10 68.6 109 42.2
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 5.3e-10 68.2 80 47.5
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 6.9e-10 67.8 94 46.8
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 9.1e-10 67.4 69 53.6
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 1.2e-09 67.0 88 45.5
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 1.5e-09 66.6 94 53.2
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 3.4e-09 65.5 84 46.4
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 1.0e-08 63.9 68 54.4
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 1.3e-08 63.5 102 45.1
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 2.9e-08 62.4 67 52.2
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 2.9e-08 62.4 63 52.4
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 3.8e-08 62.0 87 41.4
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 8.5e-08 60.8 79 50.6
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 2.5e-07 59.3 80 46.2
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 3.2e-07 58.9 66 51.5
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 2.7e-06 55.8 95 44.2
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 7.9e-06 54.3 75 41.3


User provided reference genes

Program Settings