Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p09370 Brassica napus HOM05D000096 ORTHO05D010037 3.5e-80 301.6 155 100.0
C01p13750 Brassica napus HOM05D000096 ORTHO05D010037 3.5e-80 301.6 155 100.0
C03p74460 Brassica napus HOM05D000096 ORTHO05D010037 3.5e-80 301.6 155 100.0
BolC1t00856H Brassica oleracea HOM05D000353 ORTHO05D010037 5.6e-78 294.3 155 98.7
BolC1t03913H Brassica oleracea HOM05D000353 ORTHO05D010037 5.6e-78 294.3 155 98.7
BolC5t32061H Brassica oleracea HOM05D000353 ORTHO05D010037 2.9e-74 282.0 155 96.1
C05p33350 Brassica napus HOM05D000353 ORTHO05D010037 1.1e-73 280.0 154 96.1
BcaB05g23882 Brassica carinata HOM05D000353 ORTHO05D010037 4.1e-65 251.5 156 86.5
BcaC05g27394 Brassica carinata HOM05D000096 ORTHO05D010037 7.0e-65 250.8 138 96.4
BcaC05g25726 Brassica carinata HOM05D000353 ORTHO05D010037 2.5e-25 119.4 75 85.3
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-19 100.1 128 45.3
Carub.0001s3687 Capsella rubella HOM05D000353 ORTHO05D000174 7.9e-16 87.8 114 40.4
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 1.0e-15 87.4 114 38.6
Carub.0008s0742 Capsella rubella HOM05D000353 ORTHO05D010037 3.9e-15 85.5 139 36.0
BcaB01g00798 Brassica carinata HOM05D000096 ORTHO05D010037 1.1e-14 84.0 110 39.1
C02p47710 Brassica napus HOM05D000096 ORTHO05D010037 1.9e-14 83.2 160 31.2
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-14 82.8 112 40.2
BcaC03g15185 Brassica carinata HOM05D000096 ORTHO05D010037 4.3e-14 82.0 110 36.4
C02p27650 Brassica napus HOM05D000096 ORTHO05D010037 4.3e-14 82.0 110 36.4
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.7e-14 81.6 112 43.8
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.7e-14 80.9 110 35.5
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.7e-14 80.9 110 35.5
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.7e-14 80.9 110 35.5
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.7e-14 80.9 110 35.5
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 9.7e-14 80.9 110 35.5
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.7e-14 80.9 110 35.5
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.3e-13 80.5 110 35.5
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.3e-13 80.5 110 35.5
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.3e-13 80.5 110 35.5
BolC8t47319H Brassica oleracea HOM05D000353 ORTHO05D000174 6.3e-13 78.2 131 35.9
BcaB08g34639 Brassica carinata HOM05D000353 ORTHO05D000174 8.2e-13 77.8 132 34.8
BcaC04g19160 Brassica carinata HOM05D000096 ORTHO05D010037 8.2e-13 77.8 110 35.5
A02p28680 Brassica napus HOM05D000096 ORTHO05D010037 8.2e-13 77.8 114 36.0
A05p21280 Brassica napus HOM05D000096 ORTHO05D010037 8.2e-13 77.8 114 36.0
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 8.2e-13 77.8 110 37.3
C03p63050 Brassica napus HOM05D000096 ORTHO05D010037 8.2e-13 77.8 114 36.0
C05p53330 Brassica napus HOM05D000096 ORTHO05D010037 8.2e-13 77.8 114 36.0
BraA05t21036Z Brassica rapa HOM05D000096 ORTHO05D010037 8.2e-13 77.8 114 36.0
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-12 77.4 110 34.5
BolC2t10807H Brassica oleracea HOM05D000096 ORTHO05D010037 1.4e-12 77.0 117 36.8
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-12 77.0 158 32.9
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-12 76.6 158 32.9
BcaC05g27207 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-12 75.9 131 34.4
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-12 75.9 133 35.3
BolC5t31838H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-12 75.9 131 34.4
BolC5t34006H Brassica oleracea HOM05D000096 ORTHO05D010037 3.1e-12 75.9 114 36.0
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-12 75.9 126 35.7
BolC9t57766H Brassica oleracea HOM05D000096 ORTHO05D010037 3.1e-12 75.9 117 34.2
BraA02t07903Z Brassica rapa HOM05D000096 ORTHO05D010037 3.1e-12 75.9 114 35.1
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-12 75.5 156 32.7
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-12 75.5 110 37.3
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-12 75.5 133 35.3
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 4.1e-12 75.5 108 37.0
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.1e-12 75.5 148 33.8
C09p49170 Brassica napus HOM05D000096 ORTHO05D000045 5.3e-12 75.1 117 34.2
BolC5t33999H Brassica oleracea HOM05D000096 ORTHO05D010037 5.3e-12 75.1 112 34.8
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 9.0e-12 74.3 133 35.3
C09p64170 Brassica napus HOM05D000096 ORTHO05D010037 9.0e-12 74.3 110 34.5
BolC2t10805H Brassica oleracea HOM05D000353 ORTHO05D010037 9.0e-12 74.3 131 34.4
Carub.0025s0004 Capsella rubella HOM05D000353 ORTHO05D000174 9.0e-12 74.3 159 30.8
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-11 73.9 110 36.4
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-11 73.9 156 34.0
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-11 73.6 134 33.6
BolC7t42420H Brassica oleracea HOM05D000096 ORTHO05D010037 1.5e-11 73.6 114 36.0
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-11 73.2 127 36.2
C05p53390 Brassica napus HOM05D000353 ORTHO05D010037 2.0e-11 73.2 110 36.4
BcaNung06211 Brassica carinata HOM05D000353 ORTHO05D000174 3.4e-11 72.4 156 32.1
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-11 72.4 133 33.1
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 3.4e-11 72.4 153 33.3
Carub.0008s0745 Capsella rubella HOM05D000353 ORTHO05D000174 3.4e-11 72.4 114 34.2
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 4.5e-11 72.0 133 33.8
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 4.5e-11 72.0 133 33.8
BolC6t35509H Brassica oleracea HOM05D000353 ORTHO05D000174 1.0e-10 70.9 110 38.2
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.3e-10 70.5 110 40.9
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-10 69.7 127 35.4
BolC2t09047H Brassica oleracea HOM05D000096 ORTHO05D010037 2.2e-10 69.7 114 33.3
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 2.2e-10 69.7 127 35.4
BolC8t48490H Brassica oleracea HOM05D000096 ORTHO05D010037 3.8e-10 68.9 124 33.1
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 6.5e-10 68.2 161 32.9
A06p13610 Brassica napus HOM05D000353 ORTHO05D000174 6.5e-10 68.2 120 35.0
BolC5t34013H Brassica oleracea HOM05D000096 ORTHO05D010037 6.5e-10 68.2 124 33.9
BolC9t55253H Brassica oleracea HOM05D000353 ORTHO05D000174 6.5e-10 68.2 99 38.4
A01p31990 Brassica napus HOM05D000353 ORTHO05D013802 8.5e-10 67.8 115 37.4
Thhalv10002212m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.5e-10 67.8 111 41.4
BcaC09g50232 Brassica carinata HOM05D000096 ORTHO05D010037 1.9e-09 66.6 161 29.2
C02p47680 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-09 66.6 105 37.1
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-09 66.2 110 35.5
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.5e-09 66.2 114 39.5
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-09 65.9 142 30.3
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-09 65.9 143 34.3
A05p24550 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-09 65.9 141 34.8
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 3.2e-09 65.9 142 30.3
BolC2t10352H Brassica oleracea HOM05D000353 ORTHO05D000174 3.2e-09 65.9 143 34.3
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-09 65.9 143 34.3
A01p27030 Brassica napus HOM05D000096 ORTHO05D010037 4.2e-09 65.5 80 42.5
Thhalv10029208m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.5e-09 65.1 111 39.6
Ah.05g169550 Amaranthus hybridus HOM05D002441 ORTHO05D002376 7.2e-09 64.7 128 35.2
BcaC05g27600 Brassica carinata HOM05D000096 ORTHO05D010037 7.2e-09 64.7 141 29.1
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 7.2e-09 64.7 145 32.4
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 9.4e-09 64.3 96 39.6
C07p19090 Brassica napus HOM05D000096 ORTHO05D000045 9.4e-09 64.3 109 33.0
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 9.4e-09 64.3 119 36.1
AT1G36510 Arabidopsis thaliana HOM05D000353 ORTHO05D010037 1.2e-08 63.9 148 31.8
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-08 63.2 141 31.2
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-08 63.2 141 31.2
BolC3t20719H Brassica oleracea HOM05D000353 ORTHO05D000174 2.7e-08 62.8 109 34.9
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 3.6e-08 62.4 109 37.6
BcaC05g27210 Brassica carinata HOM05D000096 ORTHO05D010037 3.6e-08 62.4 105 32.4
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 6.1e-08 61.6 140 32.1
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 7.9e-08 61.2 146 30.1
C05p35860 Brassica napus HOM05D000096 ORTHO05D000045 7.9e-08 61.2 100 37.0
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 7.9e-08 61.2 103 35.9
C02p27170 Brassica napus HOM05D000096 ORTHO05D010037 1.0e-07 60.8 100 36.0
C09p17530 Brassica napus HOM05D000096 ORTHO05D010037 1.0e-07 60.8 158 29.7
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 2.3e-07 59.7 136 31.6
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 3.0e-07 59.3 150 30.7
BcaB06g27107 Brassica carinata HOM05D000353 ORTHO05D000174 5.1e-07 58.5 109 34.9
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-07 58.5 93 36.6
C09p23310 Brassica napus HOM05D000096 ORTHO05D010037 5.1e-07 58.5 92 34.8
BolC9t57770H Brassica oleracea HOM05D000353 ORTHO05D010037 5.1e-07 58.5 92 37.0
BcaB03g16823 Brassica carinata HOM05D000353 ORTHO05D000174 6.7e-07 58.2 125 30.4
BraA06t27230Z Brassica rapa HOM05D000353 ORTHO05D000174 6.7e-07 58.2 131 34.4
BcaB01g01518 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-06 57.4 112 33.9
BcaC04g20210 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-06 57.4 106 29.2
BcaB07g31907 Brassica carinata HOM05D000096 ORTHO05D010037 1.5e-06 57.0 104 38.5
BcaC05g25257 Brassica carinata HOM05D000353 ORTHO05D000174 1.5e-06 57.0 124 31.5
BolC1t04275H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-06 57.0 124 31.5
BolC9t56965H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-06 57.0 159 31.4
A03p66220 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-06 56.6 106 34.9
BraA03t15675Z Brassica rapa HOM05D000353 ORTHO05D000174 2.0e-06 56.6 106 34.9
BcaC04g18618 Brassica carinata HOM05D000353 ORTHO05D000174 2.5e-06 56.2 147 30.6
C07p13350 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-06 56.2 149 30.2
BolC7t41829H Brassica oleracea HOM05D000353 ORTHO05D000174 2.5e-06 56.2 149 30.2
Carub.0001s3741 Capsella rubella HOM05D000353 ORTHO05D000174 2.5e-06 56.2 96 34.4
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 2.5e-06 56.2 111 35.1
C03p86410 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-06 55.8 136 33.1
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 3.3e-06 55.8 112 31.2
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 4.3e-06 55.5 158 29.7
A09p64020 Brassica napus HOM05D000096 ORTHO05D000045 4.3e-06 55.5 125 31.2
C01p17330 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-06 55.5 109 30.3
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-06 55.5 109 33.9
C09p45320 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-06 55.5 132 32.6
C09p49860 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-06 55.5 109 33.9
BolC9t54202H Brassica oleracea HOM05D000353 ORTHO05D000174 4.3e-06 55.5 109 33.9
Carub.0007s3247 Capsella rubella HOM05D000353 ORTHO05D000174 4.3e-06 55.5 159 28.9
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 4.3e-06 55.5 160 27.5
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.3e-06 55.5 111 36.0
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 4.3e-06 55.5 115 30.4
BcaC07g40033 Brassica carinata HOM05D000353 ORTHO05D000174 5.7e-06 55.1 109 33.9
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.7e-06 55.1 115 35.7
A06p18350 Brassica napus HOM05D000353 ORTHO05D000174 7.4e-06 54.7 124 30.6
A10p02600 Brassica napus HOM05D000353 ORTHO05D000174 7.4e-06 54.7 138 33.3
PGSC0003DMG400007030 Solanum tuberosum HOM05D002441 ORTHO05D002513 7.4e-06 54.7 153 24.2
BcaB04g17634 Brassica carinata HOM05D000353 ORTHO05D000174 9.7e-06 54.3 139 30.2
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 9.7e-06 54.3 146 29.5
C05p40800 Brassica napus HOM05D000353 ORTHO05D000174 9.7e-06 54.3 99 35.4


User provided reference genes

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