Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 9.1e-113 410.2 202 100.0
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 3.9e-108 394.8 202 97.0
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 2.9e-95 352.1 204 88.7
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 3.8e-95 351.7 203 88.7
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 5.5e-94 347.8 203 88.7
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 8.8e-92 340.5 200 87.0
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 9.1e-81 303.9 202 79.7
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 1.7e-79 299.7 199 79.4
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 1.5e-78 296.6 200 77.0
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 1.2e-69 266.9 199 71.9
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 4.7e-69 265.0 206 69.9
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 1.9e-65 253.1 155 83.2
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 2.7e-64 249.2 156 80.8
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 6.0e-64 248.1 183 67.2
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 1.3e-63 246.9 155 80.6
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 3.3e-62 242.3 163 74.2
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 4.3e-62 241.9 164 75.0
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 2.8e-61 239.2 180 68.3
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.8e-61 239.2 184 67.4
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 6.2e-61 238.0 184 67.4
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 6.2e-61 238.0 184 67.4
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.1e-60 237.3 162 71.6
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 4.0e-60 235.3 182 69.2
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 2.0e-59 233.0 175 66.3
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 2.0e-59 233.0 175 66.3
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 4.4e-59 231.9 163 69.3
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 9.8e-59 230.7 166 70.5
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 2.9e-58 229.2 159 70.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 3.7e-58 228.8 153 73.9
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 4.9e-58 228.4 155 72.3
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 8.3e-58 227.6 158 72.2
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 1.9e-57 226.5 160 70.0
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.9e-57 226.5 192 64.1
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 3.2e-57 225.7 162 67.9
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 5.4e-57 224.9 155 70.3
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 2.7e-56 222.6 156 69.2
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 2.7e-56 222.6 172 65.7
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 3.5e-56 222.2 156 69.2
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 4.6e-56 221.9 193 62.2
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 6.0e-56 221.5 156 71.8
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 6.0e-56 221.5 156 71.8
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 7.8e-56 221.1 155 70.3
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 1.0e-55 220.7 158 69.6
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 1.0e-55 220.7 175 65.7
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.7e-55 219.9 157 73.2
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.7e-55 219.9 158 69.6
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 2.3e-55 219.5 156 71.2
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 3.0e-55 219.2 172 65.7
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 3.9e-55 218.8 162 67.9
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 8.6e-55 217.6 156 68.6
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.1e-54 217.2 156 69.2
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 1.5e-54 216.9 174 63.8
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.5e-54 216.9 151 70.9
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.5e-54 216.9 153 69.3
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.5e-54 216.1 135 77.8
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 2.5e-54 216.1 163 69.9
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 3.3e-54 215.7 156 67.9
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 7.3e-54 214.5 157 67.5
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 9.5e-54 214.2 154 69.5
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.2e-53 213.8 154 68.8
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 2.8e-53 212.6 159 69.8
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 2.8e-53 212.6 151 66.9
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 6.2e-53 211.5 151 69.5
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 6.2e-53 211.5 188 61.2
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.1e-52 210.7 175 64.0
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 1.4e-52 210.3 159 68.6
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 2.3e-52 209.5 150 70.0
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 2.3e-52 209.5 151 68.9
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 2.3e-52 209.5 151 70.2
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 4.0e-52 208.8 179 63.7
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 1.2e-51 207.2 153 67.3
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.4e-51 205.7 158 64.6
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 4.4e-51 205.3 176 61.4
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 5.8e-51 204.9 165 63.6
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 1.7e-50 203.4 150 66.7
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 6.4e-50 201.4 145 70.3
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 8.3e-50 201.1 152 69.1
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 8.3e-50 201.1 150 66.0
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 1.9e-49 199.9 155 63.2
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 1.9e-49 199.9 147 66.0
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 3.2e-49 199.1 194 56.2
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 7.1e-49 198.0 144 69.4
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 9.2e-49 197.6 132 72.7
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 9.2e-49 197.6 132 72.7
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 9.2e-49 197.6 132 72.7
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 8.6e-47 191.0 150 62.7
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 4.3e-46 188.7 125 70.4
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.2e-45 187.2 150 60.7
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 2.8e-45 186.0 150 60.0
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.8e-44 183.3 150 58.7
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 1.8e-44 183.3 140 64.3
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 3.8e-42 175.6 150 54.7
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 5.1e-39 165.2 152 58.6
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 3.3e-38 162.5 112 68.8
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 1.5e-35 153.7 216 48.1
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 9.9e-35 151.0 198 48.5
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 9.9e-35 151.0 136 55.1
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 9.3e-33 144.4 198 44.9
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 3.9e-31 139.0 150 47.3
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.1e-30 137.5 155 51.0
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 1.3e-29 134.0 164 48.2
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 1.1e-28 131.0 105 63.8
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 4.9e-26 122.1 80 73.8
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.1e-25 120.9 82 69.5
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 9.3e-25 117.9 151 40.4
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 1.6e-24 117.1 162 43.8
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 9.6e-22 107.8 151 38.4
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 9.6e-22 107.8 82 67.1
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 4.0e-20 102.4 76 61.8
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-16 90.1 58 65.5
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 8.7e-15 84.7 79 57.0
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.1e-12 77.8 146 37.0
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 9.3e-09 64.7 42 71.4


User provided reference genes

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