Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p11410 Brassica napus HOM05D008271 ORTHO05D024079 8.2e-47 189.9 86 100.0
BcaC09g51616 Brassica carinata HOM05D008271 ORTHO05D024079 1.5e-45 185.7 86 98.8
BraA01t00922Z Brassica rapa HOM05D008271 ORTHO05D024079 1.1e-40 169.5 81 93.8
BcaB06g28583 Brassica carinata HOM05D008271 ORTHO05D024079 2.5e-35 151.8 84 81.0
BcaNung04039 Brassica carinata HOM05D008271 ORTHO05D010809 1.4e-22 109.4 81 59.3
BcaB04g17694 Brassica carinata HOM05D008271 ORTHO05D010809 9.1e-22 106.7 79 60.8
C07p49020 Brassica napus HOM05D008271 ORTHO05D010809 1.7e-20 102.4 83 56.6
BolC7t45411H Brassica oleracea HOM05D008271 ORTHO05D010809 1.7e-20 102.4 83 56.6
Sp7g16410 Schrenkiella parvula HOM05D008271 ORTHO05D010809 1.7e-20 102.4 83 54.2
A03p50650 Brassica napus HOM05D008271 ORTHO05D010809 2.2e-20 102.1 79 57.0
C07p49040 Brassica napus HOM05D008271 ORTHO05D010809 2.2e-20 102.1 79 57.0
BraA03t14157Z Brassica rapa HOM05D008271 ORTHO05D010809 2.2e-20 102.1 79 57.0
Sp7g16400 Schrenkiella parvula HOM05D008271 ORTHO05D010809 8.5e-20 100.1 79 57.0
C07p48970 Brassica napus HOM05D008271 ORTHO05D010809 1.1e-19 99.8 81 55.6
C07p48980 Brassica napus HOM05D008271 ORTHO05D010809 1.1e-19 99.8 81 55.6
BolC7t45405H Brassica oleracea HOM05D008271 ORTHO05D010809 1.1e-19 99.8 81 55.6
BolC7t45407H Brassica oleracea HOM05D008271 ORTHO05D010809 1.1e-19 99.8 81 55.6
BcaC06g33578 Brassica carinata HOM05D008271 ORTHO05D010809 1.5e-19 99.4 81 55.6
C07p49000 Brassica napus HOM05D008271 ORTHO05D010809 1.5e-19 99.4 81 55.6
BolC7t45408H Brassica oleracea HOM05D008271 ORTHO05D010809 1.5e-19 99.4 81 55.6
AL7G36860 Arabidopsis lyrata HOM05D008271 ORTHO05D010809 4.2e-19 97.8 80 56.2
BcaC06g33576 Brassica carinata HOM05D008271 ORTHO05D010809 4.2e-19 97.8 81 54.3
BolC1t01110H Brassica oleracea HOM05D008271 ORTHO05D024079 4.2e-19 97.8 43 100.0
BolC7t45406H Brassica oleracea HOM05D008271 ORTHO05D010809 7.2e-19 97.1 81 54.3
A03p50630 Brassica napus HOM05D008271 ORTHO05D010809 2.7e-18 95.1 81 53.1
BraA03t14155Z Brassica rapa HOM05D008271 ORTHO05D010809 2.7e-18 95.1 81 53.1
AT2G06166 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 3.6e-18 94.7 80 55.0
BraA03t14154Z Brassica rapa HOM05D008271 ORTHO05D010809 1.0e-17 93.2 81 51.9
AT4G17718 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 1.4e-17 92.8 80 55.0
BcaC06g33577 Brassica carinata HOM05D008271 ORTHO05D010809 1.5e-16 89.4 81 51.9
Thhalv10027032m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 2.8e-15 85.1 81 50.6
A06p19450 Brassica napus HOM05D008271 ORTHO05D010809 2.4e-14 82.0 80 48.8
BraA06t25024Z Brassica rapa HOM05D008271 ORTHO05D010809 4.1e-14 81.3 80 46.2
A06p19440 Brassica napus HOM05D008271 ORTHO05D010809 5.4e-14 80.9 80 46.2
BraA06t25023Z Brassica rapa HOM05D008271 ORTHO05D010809 5.4e-14 80.9 80 46.2
BraA06t27067Z Brassica rapa HOM05D008271 ORTHO05D010809 5.4e-14 80.9 80 46.2
Sp7g16420 Schrenkiella parvula HOM05D008271 ORTHO05D010809 5.4e-14 80.9 81 48.1
BolC8t48473H Brassica oleracea HOM05D008271 ORTHO05D010809 7.0e-14 80.5 80 46.2
BolC8t48475H Brassica oleracea HOM05D008271 ORTHO05D010809 7.0e-14 80.5 80 46.2
BcaC07g38069 Brassica carinata HOM05D008271 ORTHO05D010809 1.6e-13 79.3 80 46.2
Aa31LG6G460 Aethionema arabicum HOM05D008271 ORTHO05D010809 2.7e-13 78.6 82 46.3
Carub.0007s2365 Capsella rubella HOM05D008271 ORTHO05D010809 1.7e-12 75.9 82 47.6
AT4G17713 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 2.3e-12 75.5 83 41.0
BcaC06g33575 Brassica carinata HOM05D008271 ORTHO05D032231 1.6e-10 69.3 61 49.2
C07p48960 Brassica napus HOM05D008271 ORTHO05D032231 1.6e-10 69.3 61 49.2
BolC7t45404H Brassica oleracea HOM05D008271 ORTHO05D032231 1.6e-10 69.3 61 49.2
BcaC06g33584 Brassica carinata HOM05D008271 ORTHO05D010809 6.1e-10 67.4 57 57.9
Carub.0005s0726 Capsella rubella HOM05D008271 ORTHO05D010809 4.9e-07 57.8 81 35.8
A03p50640 Brassica napus HOM05D000742 ORTHO05D000924 5.4e-06 54.3 38 63.2
BraA03t14156Z Brassica rapa HOM05D000742 ORTHO05D000924 5.4e-06 54.3 38 63.2


User provided reference genes

Program Settings