Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p11340 Brassica napus HOM05D005079 ORTHO05D006362 3.5e-52 208.0 104 100.0
BolC1t01102H Brassica oleracea HOM05D005079 ORTHO05D006362 3.5e-52 208.0 104 100.0
BcaC09g50374 Brassica carinata HOM05D005079 ORTHO05D006362 1.6e-36 156.0 95 86.3
C01p26130 Brassica napus HOM05D005079 ORTHO05D006362 1.6e-36 156.0 95 86.3
BolC1t02557H Brassica oleracea HOM05D005079 ORTHO05D006362 1.6e-36 156.0 95 86.3
A01p20660 Brassica napus HOM05D005079 ORTHO05D006362 3.5e-36 154.8 95 86.3
BraA01t02000Z Brassica rapa HOM05D005079 ORTHO05D006362 3.5e-36 154.8 95 86.3
AL7G38200 Arabidopsis lyrata HOM05D005079 ORTHO05D006362 1.0e-35 153.3 93 84.9
CARHR223060 Cardamine hirsuta HOM05D005079 ORTHO05D006362 1.0e-35 153.3 93 84.9
Sp7g15190 Schrenkiella parvula HOM05D005079 ORTHO05D006362 1.0e-35 153.3 95 84.2
BcaNung00170 Brassica carinata HOM05D005079 ORTHO05D006362 1.8e-35 152.5 92 87.0
Thhalv10024535m.g Eutrema salsugineum HOM05D005079 ORTHO05D006362 1.9e-34 149.1 91 83.5
Carub.0007s2483 Capsella rubella HOM05D005079 ORTHO05D006362 1.3e-33 146.4 95 80.0
AT4G16570 Arabidopsis thaliana HOM05D005079 ORTHO05D006362 2.1e-33 145.6 96 81.2
THA.LOC104815493 Tarenaya hassleriana HOM05D005079 ORTHO05D006362 3.1e-32 141.7 95 76.8
Aa31LG2G12700 Aethionema arabicum HOM05D005079 ORTHO05D006362 2.6e-31 138.7 93 78.5
CANSAT21G1873 Cannabis sativa HOM05D005079 ORTHO05D006362 6.0e-28 127.5 95 71.6
COL.COLO4_37183 Corchorus olitorius HOM05D005079 ORTHO05D006362 6.0e-28 127.5 95 72.6
MD04G1063800 Malus domestica HOM05D005079 ORTHO05D006362 7.9e-28 127.1 95 71.6
Cpa.g.sc29.152 Carica papaya HOM05D005079 ORTHO05D006362 1.8e-27 125.9 93 72.0
Potri.003G076500 Populus trichocarpa HOM05D005079 ORTHO05D006362 3.0e-27 125.2 95 71.6
GSVIVG01001320001 Vitis vinifera HOM05D005079 ORTHO05D006362 3.0e-27 125.2 93 69.9
CiPaw.11G153800 Carya illinoinensis HOM05D005079 ORTHO05D006362 5.1e-27 124.4 92 70.7
TWI81G0601 Tripterygium wilfordii HOM05D005079 ORTHO05D006362 8.7e-27 123.6 93 69.9
RcHm_v2.0_Chr7g0203171 Rosa chinensis HOM05D005079 ORTHO05D006362 1.1e-26 123.2 92 71.7
Atru.chr9.1320 Acer truncatum HOM05D005079 ORTHO05D006362 1.5e-26 122.9 95 68.4
TAR629G2205 Trochodendron aralioides HOM05D005079 ORTHO05D006362 2.5e-26 122.1 95 66.3
Duzib205G0133 Durio zibethinus HOM05D005079 ORTHO05D006362 3.3e-26 121.7 95 70.5
Ca_21961_v3 Cicer arietinum L. HOM05D005079 ORTHO05D006362 5.7e-26 120.9 95 68.4
Dinv39143 Davidia involucrata HOM05D005079 ORTHO05D006362 5.7e-26 120.9 95 68.4
FvH4_5g18820 Fragaria vesca HOM05D005079 ORTHO05D006362 5.7e-26 120.9 92 69.6
FAN04G2358 Fragaria x ananassa HOM05D005079 ORTHO05D006362 5.7e-26 120.9 93 69.9
FAN18G1282 Fragaria x ananassa HOM05D005079 ORTHO05D006362 5.7e-26 120.9 92 69.6
HanXRQChr17g0549661 Helianthus annuus HOM05D005079 ORTHO05D006362 5.7e-26 120.9 92 69.6
vmacro00317 Vaccinium macrocarpon HOM05D005079 ORTHO05D006362 5.7e-26 120.9 95 65.3
Hma1.2p1_1172F.1_g263540 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 7.4e-26 120.6 95 68.4
Hma1.2p1_1172F.1_g263550 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 7.4e-26 120.6 95 68.4
Hma1.2p1_1786F.1_g302370 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 7.4e-26 120.6 95 68.4
Lj4g0012374 Lotus japonicus HOM05D005079 ORTHO05D006362 7.4e-26 120.6 92 71.7
QL12p012230 Quercus lobata HOM05D005079 ORTHO05D006362 7.4e-26 120.6 92 68.5
Cc08_g12490 Coffea canephora HOM05D005079 ORTHO05D006362 9.6e-26 120.2 93 68.8
Psat4g071960 Pisum sativum HOM05D005079 ORTHO05D006362 9.6e-26 120.2 88 72.7
TPR.G37701 Trifolium pratense HOM05D005079 ORTHO05D006362 9.6e-26 120.2 95 69.5
CSS0009127 Camellia sinensis var. sinensis HOM05D005079 ORTHO05D006362 1.6e-25 119.4 95 66.3
Sabra03G0047100 Salix brachista HOM05D005079 ORTHO05D006362 1.6e-25 119.4 95 69.5
AUR62007514 Chenopodium quinoa HOM05D005079 ORTHO05D006362 2.1e-25 119.0 91 68.1
FAN08G1452 Fragaria x ananassa HOM05D005079 ORTHO05D006362 2.1e-25 119.0 92 70.7
SalBow6G6450 Salvia bowleyana HOM05D005079 ORTHO05D006362 2.1e-25 119.0 95 68.4
CSS0023122 Camellia sinensis var. sinensis HOM05D005079 ORTHO05D006362 2.8e-25 118.6 95 66.3
Ciclev10023597m.g Citrus clementina HOM05D005079 ORTHO05D006362 2.8e-25 118.6 93 67.7
Lj8C262G4 Lonicera japonica HOM05D005079 ORTHO05D006362 2.8e-25 118.6 93 67.7
ClCG01G004030 Citrullus lanatus HOM05D005079 ORTHO05D006362 4.8e-25 117.9 93 67.7
Medtr4g100980 Medicago truncatula HOM05D005079 ORTHO05D006362 4.8e-25 117.9 91 70.3
Thecc.03G252100 Theobroma cacao HOM05D005079 ORTHO05D006362 4.8e-25 117.9 93 68.8
Actinidia14431 Actinidia chinensis HOM05D005079 ORTHO05D006362 6.2e-25 117.5 95 66.3
Lalb_Chr16g0386651 Lupinus albus HOM05D005079 ORTHO05D006362 8.2e-25 117.1 92 69.6
Oeu020426.1 Olea europaea HOM05D005079 ORTHO05D006362 8.2e-25 117.1 95 64.2
Peaxi162Scf02065g00020 Petunia axillaris HOM05D005079 ORTHO05D006362 8.2e-25 117.1 91 68.1
Glyma.05G059000 Glycine max HOM05D005079 ORTHO05D006362 1.1e-24 116.7 101 67.3
Gohir.A03G008400 Gossypium hirsutum HOM05D005079 ORTHO05D006362 1.1e-24 116.7 95 67.4
Zm00001eb379320 Zea mays HOM05D005079 ORTHO05D006362 1.1e-24 116.7 92 68.5
Cfa012713 Carpinus fangiana HOM05D005079 ORTHO05D006362 1.4e-24 116.3 88 69.3
Eucgr.D02075 Eucalyptus grandis HOM05D005079 ORTHO05D006362 1.4e-24 116.3 92 65.2
Prupe.5G069000 Prunus persica HOM05D005079 ORTHO05D006362 1.8e-24 115.9 95 66.3
Sopen06g020790 Solanum pennellii HOM05D005079 ORTHO05D006362 1.8e-24 115.9 91 68.1
Aqoxy7G00758 Aquilegia oxysepala HOM05D005079 ORTHO05D006362 2.4e-24 115.5 93 65.6
Rhsim02G0165500 Rhododendron simsii HOM05D005079 ORTHO05D006362 2.4e-24 115.5 93 63.4
Haze_07920 Corylus avellana HOM05D005079 ORTHO05D006362 3.1e-24 115.2 88 69.3
AUR62042789 Chenopodium quinoa HOM05D005079 ORTHO05D006362 4.1e-24 114.8 91 65.9
AUR62044148 Chenopodium quinoa HOM05D005079 ORTHO05D006362 4.1e-24 114.8 91 65.9
Migut.A00986 Erythranthe guttata HOM05D005079 ORTHO05D006362 4.1e-24 114.8 95 67.4
Lsat_1_v5_gn_5_188000 Lactuca sativa HOM05D005079 ORTHO05D006362 4.1e-24 114.8 92 68.5
Sc01g0008470 Simmondsia chinensis HOM05D005079 ORTHO05D006362 4.1e-24 114.8 95 66.3
Sed0023601 Sechium edule HOM05D005079 ORTHO05D006362 5.3e-24 114.4 95 64.2
MBI04_g09493_MAGBIO Magnolia biondii HOM05D005079 ORTHO05D006362 6.9e-24 114.0 95 63.2
MELO3C005534.2 Cucumis melo HOM05D005079 ORTHO05D006362 9.0e-24 113.6 93 64.5
Nitab4.5_0000618g0020 Nicotiana tabacum HOM05D005079 ORTHO05D006362 9.0e-24 113.6 91 65.9
unitig_744.g24463 Utricularia gibba HOM05D005079 ORTHO05D006362 9.0e-24 113.6 95 63.2
CsaV3_5G004210 Cucumis sativus L. HOM05D005079 ORTHO05D006362 1.2e-23 113.2 93 64.5
CAN.G1037.9 Capsicum annuum HOM05D005079 ORTHO05D006362 1.5e-23 112.8 91 67.0
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 1.5e-23 112.8 95 64.2
Gorai.003G171100 Gossypium raimondii HOM05D005079 ORTHO05D006362 1.5e-23 112.8 95 65.3
Phvul.006G006200 Phaseolus vulgaris HOM05D005079 ORTHO05D006362 1.5e-23 112.8 95 67.4
EL10Ac5g13073 Beta vulgaris HOM05D005079 ORTHO05D006362 2.0e-23 112.5 95 62.1
Nitab4.5_0008754g0010 Nicotiana tabacum HOM05D005079 ORTHO05D006362 2.0e-23 112.5 91 65.9
MSTRG.25528 Avicennia marina HOM05D005079 ORTHO05D006362 3.4e-23 111.7 95 64.2
Gohir.D03G162500 Gossypium hirsutum HOM05D005079 ORTHO05D006362 3.4e-23 111.7 95 64.2
Migut.N00546 Erythranthe guttata HOM05D005079 ORTHO05D006362 4.5e-23 111.3 95 65.3
ATR0317G049 Amborella trichopoda HOM05D005079 ORTHO05D006362 1.3e-22 109.8 95 63.2
Solyc06g060670.4 Solanum lycopersicum HOM05D005079 ORTHO05D006362 1.3e-22 109.8 97 59.8
ECA232G1687 Erigeron canadensis HOM05D005079 ORTHO05D006362 1.7e-22 109.4 92 65.2
Ah.12g056870 Amaranthus hybridus HOM05D005079 ORTHO05D006362 2.9e-22 108.6 91 65.9
Nn1g01009 Nelumbo nucifera HOM05D005079 ORTHO05D006362 2.9e-22 108.6 93 62.4
PGR031G3122 Punica granatum HOM05D005079 ORTHO05D006362 3.8e-22 108.2 102 59.8
SGA_v2.0_scaffold120G32882 Striga asiatica HOM05D005079 ORTHO05D006362 8.4e-22 107.1 116 55.2
VMungo0540G1603 Vigna mungo HOM05D005079 ORTHO05D006362 1.1e-21 106.7 95 63.2
Os06g0105500 Oryza sativa ssp. japonica HOM05D005079 ORTHO05D006362 1.4e-21 106.3 99 60.6
Hund11595 Selenicereus undatus HOM05D005079 ORTHO05D006362 9.3e-21 103.6 108 54.6
PSO017G3550 Papaver somniferum HOM05D005079 ORTHO05D006362 7.9e-20 100.5 95 60.0
SMO014G0029 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 3.9e-19 98.2 89 59.6
AagrBONN_evm.TU.Sc2ySwM_344.1170 Anthoceros agrestis HOM05D005079 ORTHO05D006362 5.1e-19 97.8 92 56.5
SMO365G0062 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 5.1e-19 97.8 89 59.6
SMO176G0009 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 1.1e-18 96.7 89 59.6
SMO014G0007 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 2.5e-18 95.5 89 58.4
SMO304G0051 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 5.7e-18 94.4 87 58.6
SMO304G0004 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 3.7e-17 91.7 87 57.5
SMO304G0113 Selaginella moellendorffii HOM05D013654 ORTHO05D006362 3.7e-17 91.7 87 57.5
Pp3c6_22100 Physcomitrium patens HOM05D005079 ORTHO05D006362 8.2e-17 90.5 89 58.4
Migut.A00942 Erythranthe guttata HOM05D005079 ORTHO05D006362 9.0e-16 87.0 64 71.9
Mapoly0021s0157 Marchantia polymorpha HOM05D005079 ORTHO05D006362 1.3e-14 83.2 81 53.1
MBI09_g47605_MAGBIO Magnolia biondii HOM05D005079 ORTHO05D006362 5.0e-14 81.3 64 65.6
CBR_g41210 Chara braunii HOM05D005079 ORTHO05D006362 1.4e-13 79.7 93 49.5


User provided reference genes

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