Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 6.2e-100 367.5 185 100.0
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 1.1e-93 346.7 185 94.1
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.2e-92 343.2 185 93.5
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.1e-91 340.1 176 97.2
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.4e-91 339.7 202 87.1
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 2.9e-89 332.0 185 91.4
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.3e-86 323.2 185 87.6
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 9.6e-85 317.0 185 88.6
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 4.7e-84 314.7 186 86.6
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 1.1e-83 313.5 186 86.0
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 4.4e-82 308.1 178 87.1
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 9.9e-82 307.0 181 85.6
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 1.4e-80 303.1 183 84.7
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 1.9e-80 302.8 185 84.3
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 2.7e-79 298.9 185 83.2
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.2e-73 279.3 184 81.0
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 6.0e-63 244.6 183 68.9
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 2.3e-62 242.7 182 69.8
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.2e-56 221.9 145 71.7
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.2e-56 221.9 145 71.7
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 7.1e-56 221.1 185 61.1
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 1.2e-55 220.3 183 61.7
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 4.6e-55 218.4 185 59.5
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 6.0e-55 218.0 183 60.7
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.3e-54 216.9 183 60.7
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 1.3e-54 216.9 185 60.5
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.3e-54 216.1 183 59.6
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 5.1e-54 214.9 166 65.7
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 5.1e-54 214.9 161 67.1
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 1.1e-53 213.8 182 61.5
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.9e-53 213.0 185 60.0
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 2.5e-53 212.6 184 58.2
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 2.5e-53 212.6 144 69.4
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 3.3e-53 212.2 183 59.6
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 4.3e-53 211.8 184 59.8
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 4.3e-53 211.8 175 60.6
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 4.3e-53 211.8 186 59.7
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 4.3e-53 211.8 178 60.7
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 4.3e-53 211.8 186 60.2
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 5.7e-53 211.5 183 60.7
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 5.7e-53 211.5 183 59.0
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 5.7e-53 211.5 183 58.5
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 5.7e-53 211.5 184 60.3
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 5.7e-53 211.5 151 68.9
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 5.7e-53 211.5 146 69.2
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 7.4e-53 211.1 163 64.4
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 7.4e-53 211.1 187 60.4
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 7.4e-53 211.1 184 60.9
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 7.4e-53 211.1 183 59.0
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 7.4e-53 211.1 173 61.8
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 7.4e-53 211.1 184 60.9
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 2.1e-52 209.5 184 59.8
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 6.3e-52 208.0 184 58.7
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 8.2e-52 207.6 169 62.1
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.1e-51 207.2 185 58.4
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.4e-51 206.8 185 57.3
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.8e-51 206.5 116 80.2
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.8e-51 206.5 182 62.1
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.8e-51 206.5 151 66.9
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 5.3e-51 204.9 171 61.4
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 6.9e-51 204.5 185 57.8
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 9.0e-51 204.1 185 56.8
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.2e-50 203.8 184 57.1
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 1.5e-50 203.4 185 57.8
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 2.6e-50 202.6 144 69.4
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 3.4e-50 202.2 184 57.1
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 4.5e-50 201.8 185 57.3
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 5.9e-50 201.4 189 56.6
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 7.6e-50 201.1 160 63.1
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 7.6e-50 201.1 183 56.3
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 7.6e-50 201.1 182 58.2
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 7.6e-50 201.1 187 57.8
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.0e-49 200.7 184 57.1
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.0e-49 200.7 182 58.2
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 1.0e-49 200.7 190 55.8
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 1.0e-49 200.7 149 65.1
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 1.3e-49 200.3 145 66.2
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 1.7e-49 199.9 183 56.3
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.7e-49 199.9 183 58.5
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.7e-49 199.9 185 57.3
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.7e-49 199.9 182 57.7
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.2e-49 199.5 184 56.5
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 2.2e-49 199.5 183 57.9
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 2.2e-49 199.5 182 57.7
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.9e-49 199.1 157 63.1
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 2.9e-49 199.1 162 62.3
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 2.9e-49 199.1 183 57.4
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 5.0e-49 198.4 183 56.3
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 5.0e-49 198.4 114 80.7
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 5.0e-49 198.4 184 55.4
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 8.5e-49 197.6 115 78.3
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 3.2e-48 195.7 115 78.3
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.2e-48 195.3 157 61.8
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 5.5e-48 194.9 184 55.4
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 9.3e-48 194.1 116 76.7
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.2e-47 193.7 114 78.9
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.2e-47 193.7 155 62.6
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 2.1e-47 193.0 144 66.0
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 6.1e-47 191.4 184 54.9
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 7.9e-47 191.0 157 61.1
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 7.9e-47 191.0 157 61.1
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 1.0e-46 190.7 174 57.5
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 1.3e-46 190.3 126 69.0
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 8.7e-46 187.6 126 69.0
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.1e-45 187.2 145 64.1
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 1.1e-45 187.2 183 51.9
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.1e-45 187.2 159 58.5
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 2.5e-45 186.0 144 63.9
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.6e-44 183.3 159 58.5
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 6.3e-44 181.4 114 71.9
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 1.2e-42 177.2 132 65.9
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 7.7e-42 174.5 169 58.6
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 5.5e-40 168.3 114 69.3
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 2.1e-39 166.4 184 49.5
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 6.7e-38 161.4 109 67.0
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 2.2e-36 156.4 115 60.0
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 1.8e-35 153.3 108 62.0
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 2.2e-33 146.4 119 53.8
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 5.0e-33 145.2 109 59.6
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 6.5e-33 144.8 183 46.4
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 6.5e-33 144.8 109 58.7
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 4.2e-32 142.1 111 62.2
BcaNung04295 Brassica carinata HOM05D006027 ORTHO05D007604 1.4e-30 137.1 76 93.4
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 9.1e-19 97.8 57 77.2
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 9.1e-19 97.8 57 77.2
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.2e-18 97.4 57 80.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.3e-17 94.0 145 40.7
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 4.0e-14 82.4 49 73.5
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.0e-10 70.1 109 40.4
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 4.2e-08 62.4 78 46.2


User provided reference genes

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