Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p10410 Brassica napus HOM05D000469 ORTHO05D000323 2.4e-131 472.2 250 100.0
BolC1t01001H Brassica oleracea HOM05D000469 ORTHO05D000323 1.3e-97 360.1 225 88.4
BraA03t13483Z Brassica rapa HOM05D000469 ORTHO05D000323 4.0e-94 348.6 292 68.8
A03p43450 Brassica napus HOM05D000469 ORTHO05D000323 8.9e-94 347.4 292 68.5
BcaC01g03349 Brassica carinata HOM05D000469 ORTHO05D000323 1.1e-91 340.5 294 67.3
C07p11360 Brassica napus HOM05D001537 ORTHO05D021960 1.9e-91 339.7 214 86.4
C03p53410 Brassica napus HOM05D000469 ORTHO05D000323 3.2e-91 339.0 294 67.0
BolC3t17601H Brassica oleracea HOM05D000469 ORTHO05D000323 3.2e-91 339.0 294 67.0
BcaB03g14603 Brassica carinata HOM05D000469 ORTHO05D000323 7.1e-91 337.8 291 66.0
Sp3g21790 Schrenkiella parvula HOM05D000469 ORTHO05D000323 4.7e-87 325.1 291 65.6
Thhalv10002558m.g Eutrema salsugineum HOM05D000469 ORTHO05D000323 2.7e-82 309.3 291 62.9
BcaB04g20403 Brassica carinata HOM05D000469 ORTHO05D000323 6.6e-81 304.7 294 63.3
BraA01t03233Z Brassica rapa HOM05D000469 ORTHO05D000323 6.4e-76 288.1 293 60.1
AL3G39120 Arabidopsis lyrata HOM05D000469 ORTHO05D000323 5.1e-73 278.5 302 61.6
C01p39630 Brassica napus HOM05D000469 ORTHO05D000323 6.7e-73 278.1 293 58.7
BolC1t03911H Brassica oleracea HOM05D000469 ORTHO05D000323 6.7e-73 278.1 293 58.7
C04p18390 Brassica napus HOM05D000469 ORTHO05D000323 8.7e-73 277.7 167 88.6
BcaC04g19532 Brassica carinata HOM05D000469 ORTHO05D000323 5.6e-72 275.0 167 88.0
BcaC09g51698 Brassica carinata HOM05D000469 ORTHO05D000323 5.6e-72 275.0 189 83.1
A01p31080 Brassica napus HOM05D000469 ORTHO05D000323 5.6e-72 275.0 293 58.0
Carub.0003s2436 Capsella rubella HOM05D000469 ORTHO05D000323 2.6e-69 266.2 300 58.0
AT3G24140 Arabidopsis thaliana HOM05D000469 ORTHO05D000323 4.9e-68 261.9 300 59.0
BcaB06g26583 Brassica carinata HOM05D000469 ORTHO05D000323 4.9e-68 261.9 291 56.7
BcaC06g35615 Brassica carinata HOM05D000469 ORTHO05D000323 1.6e-66 256.9 291 56.4
C07p12940 Brassica napus HOM05D000469 ORTHO05D000323 1.6e-66 256.9 291 56.4
BolC7t41778H Brassica oleracea HOM05D000469 ORTHO05D000323 2.1e-66 256.5 291 56.0
BcaB01g01740 Brassica carinata HOM05D000469 ORTHO05D000323 3.9e-65 252.3 222 67.6
CARHR100060 Cardamine hirsuta HOM05D000469 ORTHO05D000323 1.6e-63 246.9 306 54.6
A07p08300 Brassica napus HOM05D000469 ORTHO05D000323 2.8e-63 246.1 291 54.3
BraA07t28613Z Brassica rapa HOM05D000469 ORTHO05D000323 2.8e-63 246.1 291 54.3
Sp3g21660 Schrenkiella parvula HOM05D000469 ORTHO05D000323 3.1e-62 242.7 297 55.6
BcaC06g35743 Brassica carinata HOM05D000469 ORTHO05D000323 2.8e-55 219.5 145 81.4
BolC7t41616H Brassica oleracea HOM05D000469 ORTHO05D000323 2.8e-55 219.5 145 81.4
A01p31170 Brassica napus HOM05D000469 ORTHO05D000323 1.5e-48 197.2 294 48.6
BcaB06g27213 Brassica carinata HOM05D000469 ORTHO05D000323 3.4e-45 186.0 230 53.9
C01p39720 Brassica napus HOM05D000469 ORTHO05D000323 1.0e-44 184.5 289 48.1
Thhalv10002990m.g Eutrema salsugineum HOM05D000469 ORTHO05D000323 7.9e-42 174.9 284 44.7
BraA05t21467Z Brassica rapa HOM05D018358 ORTHO05D000323 9.7e-40 167.9 100 85.0
Aa31LG8G10720 Aethionema arabicum HOM05D000469 ORTHO05D000323 2.8e-39 166.4 290 45.2
AL3G40120 Arabidopsis lyrata HOM05D000469 ORTHO05D000323 2.6e-37 159.8 125 72.8
Thecc.04G205100 Theobroma cacao HOM05D000469 ORTHO05D000323 7.2e-35 151.8 287 43.2
Duzib151G0523 Durio zibethinus HOM05D000469 ORTHO05D000323 9.7e-32 141.4 294 42.9
Lalb_Chr10g0099531 Lupinus albus HOM05D000469 ORTHO05D000323 3.7e-31 139.4 292 40.4
BcaB04g20414 Brassica carinata HOM05D000469 ORTHO05D000323 4.8e-31 139.0 294 40.5
Phvul.003G033900 Phaseolus vulgaris HOM05D000469 ORTHO05D000323 6.3e-31 138.7 276 41.3
VMungo1215G1318 Vigna mungo HOM05D000469 ORTHO05D000323 6.3e-31 138.7 274 41.6
Lalb_Chr04g0255091 Lupinus albus HOM05D000469 ORTHO05D000323 1.1e-30 137.9 294 40.5
Manes.15G052900 Manihot esculenta HOM05D000469 ORTHO05D000323 2.4e-30 136.7 289 39.8
Ciclev10005031m.g Citrus clementina HOM05D000469 ORTHO05D000323 7.0e-30 135.2 268 39.9
Manes.03G148500 Manihot esculenta HOM05D000469 ORTHO05D000323 1.6e-29 134.0 282 40.4
THA.LOC104804813 Tarenaya hassleriana HOM05D000469 ORTHO05D000323 1.6e-29 134.0 292 42.1
Cpa.g.sc59.132 Carica papaya HOM05D000469 ORTHO05D000323 4.5e-29 132.5 278 40.3
CiPaw.02G066700 Carya illinoinensis HOM05D000469 ORTHO05D000323 1.0e-28 131.3 289 37.7
Gohir.D10G142500 Gossypium hirsutum HOM05D000469 ORTHO05D000323 2.9e-28 129.8 294 41.8
Oeu016730.1 Olea europaea HOM05D000469 ORTHO05D000323 2.9e-28 129.8 286 39.2
Gohir.A10G123300 Gossypium hirsutum HOM05D000469 ORTHO05D000323 6.5e-28 128.6 294 41.2
Gorai.011G159100 Gossypium raimondii HOM05D000469 ORTHO05D000323 6.5e-28 128.6 294 41.5
Potri.001G314400 Populus trichocarpa HOM05D000469 ORTHO05D000323 1.9e-27 127.1 298 38.6
Oeu018222.2 Olea europaea HOM05D000469 ORTHO05D000323 3.2e-27 126.3 286 38.5
QL06p024336 Quercus lobata HOM05D000469 ORTHO05D000323 9.4e-27 124.8 264 40.2
Cc03_g07740 Coffea canephora HOM05D000469 ORTHO05D000323 8.0e-26 121.7 281 37.7
TAR636G1497 Trochodendron aralioides HOM05D000469 ORTHO05D000323 1.0e-25 121.3 285 37.2
Dinv38242 Davidia involucrata HOM05D000469 ORTHO05D000323 1.8e-25 120.6 291 38.5
Ca_05105_v3 Cicer arietinum L. HOM05D000469 ORTHO05D000323 4.0e-25 119.4 267 39.3
Prupe.1G006600 Prunus persica HOM05D000469 ORTHO05D000323 4.0e-25 119.4 291 34.4
Lj6A559T13 Lonicera japonica HOM05D000469 ORTHO05D000323 5.2e-25 119.0 296 35.8
MSTRG.9819 Avicennia marina HOM05D000469 ORTHO05D000323 6.7e-25 118.6 260 38.1
ECA238G0939 Erigeron canadensis HOM05D000469 ORTHO05D000323 6.7e-25 118.6 266 37.6
CSS0005073 Camellia sinensis var. sinensis HOM05D000469 ORTHO05D000323 8.8e-25 118.2 298 34.6
COL.COLO4_10273 Corchorus olitorius HOM05D000469 ORTHO05D000323 1.5e-24 117.5 282 38.7
FAN07G2256 Fragaria x ananassa HOM05D000469 ORTHO05D000323 1.5e-24 117.5 302 35.1
Haze_11603 Corylus avellana HOM05D000469 ORTHO05D000323 2.0e-24 117.1 265 38.1
Glyma.01G093400 Glycine max HOM05D000469 ORTHO05D000323 2.6e-24 116.7 277 37.5
Psat0s3505g0040 Pisum sativum HOM05D000469 ORTHO05D000323 2.6e-24 116.7 260 37.3
Nn1g07856 Nelumbo nucifera HOM05D000469 ORTHO05D000323 3.3e-24 116.3 284 37.7
Medtr0194s0050 Medicago truncatula HOM05D000469 ORTHO05D000323 4.4e-24 115.9 260 38.5
FvH4_4g15850 Fragaria vesca HOM05D000469 ORTHO05D000323 5.7e-24 115.5 302 34.8
FAN12G0441 Fragaria x ananassa HOM05D000469 ORTHO05D000323 1.3e-23 114.4 302 34.8
Peaxi162Scf00423g00219 Petunia axillaris HOM05D000469 ORTHO05D000323 1.7e-23 114.0 291 36.4
TAR365G0065 Trochodendron aralioides HOM05D000469 ORTHO05D000323 1.7e-23 114.0 281 38.1
Lj2g0022928 Lotus japonicus HOM05D000469 ORTHO05D000323 2.8e-23 113.2 296 35.5
MD04G1006400 Malus domestica HOM05D000469 ORTHO05D000323 2.8e-23 113.2 298 36.9
FvH4_1g23290 Fragaria vesca HOM05D000469 ORTHO05D000323 3.7e-23 112.8 302 35.1
RcHm_v2.0_Chr4g0415421 Rosa chinensis HOM05D000469 ORTHO05D000323 3.7e-23 112.8 300 36.0
FAN19G0823 Fragaria x ananassa HOM05D000469 ORTHO05D000323 4.8e-23 112.5 304 34.9
Sabra17G0046300 Salix brachista HOM05D000469 ORTHO05D000323 4.8e-23 112.5 265 36.6
Glyma.02G129100 Glycine max HOM05D000469 ORTHO05D000323 8.2e-23 111.7 279 37.3
Atru.chr4.1713 Acer truncatum HOM05D000469 ORTHO05D000323 1.1e-22 111.3 291 33.7
arahy.Tifrunner.gnm1.ann1.H4P5M1 Arachis hypogaea HOM05D000469 ORTHO05D000323 1.1e-22 111.3 300 35.0
Hma1.2p1_0187F.1_g082060 Hydrangea macrophylla HOM05D000469 ORTHO05D000323 1.1e-22 111.3 260 39.2
arahy.Tifrunner.gnm1.ann1.LE4XQH Arachis hypogaea HOM05D000469 ORTHO05D000323 1.8e-22 110.5 304 34.2
Potri.017G054500 Populus trichocarpa HOM05D000469 ORTHO05D000323 1.8e-22 110.5 294 36.1
HanXRQChr14g0435881 Helianthus annuus HOM05D000469 ORTHO05D000323 3.1e-22 109.8 286 37.4
PGR083G2370 Punica granatum HOM05D000469 ORTHO05D000323 4.1e-22 109.4 286 35.3
DCAR_026607 Daucus carota HOM05D000469 ORTHO05D000323 9.1e-22 108.2 298 36.6
FAN17G1720 Fragaria x ananassa HOM05D000469 ORTHO05D000323 9.1e-22 108.2 287 35.5
Lsat_1_v5_gn_2_44720 Lactuca sativa HOM05D000469 ORTHO05D000323 9.1e-22 108.2 273 36.6
Nn3g19966 Nelumbo nucifera HOM05D000469 ORTHO05D000323 9.1e-22 108.2 274 37.2
Sabra16G0198900 Salix brachista HOM05D000469 ORTHO05D000323 1.2e-21 107.8 269 37.5
Nitab4.5_0002260g0010 Nicotiana tabacum HOM05D000469 ORTHO05D000323 1.0e-20 104.8 234 40.2
Aqoxy2G03880 Aquilegia oxysepala HOM05D000469 ORTHO05D000323 1.3e-20 104.4 289 37.4
SalBow8G4815 Salvia bowleyana HOM05D000469 ORTHO05D000323 1.3e-20 104.4 287 35.9
Nitab4.5_0003502g0010 Nicotiana tabacum HOM05D000469 ORTHO05D000323 2.2e-20 103.6 265 37.0
GSVIVG01021074001 Vitis vinifera HOM05D000469 ORTHO05D000323 2.2e-20 103.6 277 36.1
Eucgr.H02788 Eucalyptus grandis HOM05D000469 ORTHO05D000323 1.1e-19 101.3 255 36.1
TWI09G1147 Tripterygium wilfordii HOM05D000469 ORTHO05D000323 9.4e-19 98.2 304 35.2
Actinidia35869 Actinidia chinensis HOM05D000469 ORTHO05D000323 6.1e-18 95.5 267 34.5
THA.LOC104808716 Tarenaya hassleriana HOM05D000469 ORTHO05D000323 1.2e-16 91.3 297 35.0
SGA_v2.0_scaffold57G20124 Striga asiatica HOM05D000469 ORTHO05D000323 1.5e-16 90.9 273 33.7
TPR.G19646 Trifolium pratense HOM05D000469 ORTHO05D000323 4.4e-16 89.4 258 33.7
Dinv29589 Davidia involucrata HOM05D000469 ORTHO05D000323 1.3e-15 87.8 285 33.7
TWI73G1139 Tripterygium wilfordii HOM05D000469 ORTHO05D000323 2.2e-15 87.0 301 32.9
HanXRQChr15g0484281 Helianthus annuus HOM05D000469 ORTHO05D000323 4.8e-15 85.9 284 33.1
PSO063G5613 Papaver somniferum HOM05D000469 ORTHO05D000323 8.3e-15 85.1 315 31.1
Lj6A570G14 Lonicera japonica HOM05D000469 ORTHO05D000323 1.8e-14 84.0 169 39.6
PSO017G3384 Papaver somniferum HOM05D000469 ORTHO05D000323 2.4e-14 83.6 315 31.4
CAN.G765.19 Capsicum annuum HOM05D000469 ORTHO05D000323 3.1e-14 83.2 274 31.4
PGSC0003DMG400015760 Solanum tuberosum HOM05D000469 ORTHO05D000323 5.4e-14 82.4 291 34.7
Ah.09g237230 Amaranthus hybridus HOM05D000469 ORTHO05D000323 7.0e-14 82.0 326 31.9
Migut.G00674 Erythranthe guttata HOM05D000469 ORTHO05D000323 1.3e-12 77.8 141 43.3
Sopen05g032160 Solanum pennellii HOM05D000469 ORTHO05D000323 1.7e-12 77.4 270 34.1
AL3G38510 Arabidopsis lyrata HOM05D000469 ORTHO05D000323 1.5e-11 74.3 58 75.9
CsaV3_3G011010 Cucumis sativus L. HOM05D000469 ORTHO05D000323 2.5e-11 73.6 268 31.0
MELO3C006315.2 Cucumis melo HOM05D000469 ORTHO05D000323 3.2e-11 73.2 263 30.0
Actinidia37007 Actinidia chinensis HOM05D000469 ORTHO05D000323 5.5e-11 72.4 143 41.3
Rhsim09G0055600 Rhododendron simsii HOM05D000469 ORTHO05D000323 9.5e-11 71.6 281 31.0
Nitab4.5_0004214g0060 Nicotiana tabacum HOM05D000469 ORTHO05D000323 1.8e-09 67.4 161 37.9
SEGI_34735 Sequoiadendron giganteum HOM05D000469 ORTHO05D000323 5.2e-09 65.9 301 27.6
CANSAT78G0913 Cannabis sativa HOM05D000469 ORTHO05D000323 8.8e-09 65.1 291 28.5
Zm00001eb344960 Zea mays HOM05D000469 ORTHO05D000323 8.8e-09 65.1 294 28.2
EL10Ac3g07488 Beta vulgaris HOM05D000469 ORTHO05D000323 1.2e-08 64.7 352 28.7
Hund08029 Selenicereus undatus HOM05D000469 ORTHO05D000323 1.2e-08 64.7 322 29.2
AUR62020815 Chenopodium quinoa HOM05D000469 ORTHO05D000323 2.6e-08 63.5 369 26.3
ClCG05G003350 Citrullus lanatus HOM05D000469 ORTHO05D000323 2.6e-08 63.5 258 29.1
EL10Ac4g09031 Beta vulgaris HOM05D000469 ORTHO05D000323 5.7e-08 62.4 348 27.9
CDE08G1447 Ceratophyllum demersum HOM05D000469 ORTHO05D000323 7.5e-08 62.0 260 29.2
Sed0018555 Sechium edule HOM05D000469 ORTHO05D000323 2.8e-07 60.1 259 29.0
Sp3g21800 Schrenkiella parvula HOM05D000469 ORTHO05D000323 1.1e-06 58.2 82 47.6
unitig_749.g13815 Utricularia gibba HOM05D000469 ORTHO05D000323 2.4e-06 57.0 247 29.1
Actinidia33194 Actinidia chinensis HOM05D000469 ORTHO05D000323 5.4e-06 55.8 242 30.2
Solyc05g053660.3 Solanum lycopersicum HOM05D000469 ORTHO05D000323 5.4e-06 55.8 154 35.7
HPP92_008113 Vanilla planifolia HOM05D000469 ORTHO05D000323 7.0e-06 55.5 270 28.1


User provided reference genes

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