Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p09790 Brassica napus HOM05D008615 ORTHO05D011779 3.0e-165 585.1 291 100.0
BolC1t00941H Brassica oleracea HOM05D008615 ORTHO05D011779 1.3e-152 543.1 267 99.6
BcaC09g52217 Brassica carinata HOM05D008615 ORTHO05D011779 3.1e-130 468.8 274 86.9
C01p09880 Brassica napus HOM05D008615 ORTHO05D011779 3.0e-77 292.7 282 57.8
BolC1t00951H Brassica oleracea HOM05D008615 ORTHO05D011779 3.0e-77 292.7 282 57.8
BraA01t00798Z Brassica rapa HOM05D008615 ORTHO05D011779 1.5e-76 290.4 282 57.4
BcaC09g52204 Brassica carinata HOM05D008615 ORTHO05D011779 3.1e-74 282.7 275 57.8
AL7G22840 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.4e-53 214.2 226 50.4
Carub.0007s1099 Capsella rubella HOM05D008615 ORTHO05D011779 2.2e-43 180.3 169 56.2
Thhalv10026918m.g Eutrema salsugineum HOM05D008615 ORTHO05D011779 2.4e-42 176.8 202 48.0
AL7G23550 Arabidopsis lyrata HOM05D008615 ORTHO05D021443 2.2e-35 153.7 200 40.0
AL4G38030 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 4.2e-34 149.4 200 41.5
BcaNung01345 Brassica carinata HOM05D008615 ORTHO05D021443 1.0e-32 144.8 206 39.3
AL4G38000 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 6.6e-32 142.1 200 39.5
BcaC07g39853 Brassica carinata HOM05D008615 ORTHO05D011779 3.6e-30 136.3 205 38.5
AL5G23100 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.5e-28 131.0 200 40.0
BolC8t50672H Brassica oleracea HOM05D008615 ORTHO05D011779 3.4e-28 129.8 218 36.2
AL5G23010 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.1e-26 124.8 198 39.9
A03p58490 Brassica napus HOM05D008615 ORTHO05D021443 4.2e-26 122.9 172 37.8
C04p31890 Brassica napus HOM05D008615 ORTHO05D011779 5.8e-20 102.4 205 33.7
C01p09160 Brassica napus HOM05D000574 ORTHO05D004834 1.6e-17 94.4 204 30.9
BolC1t00907H Brassica oleracea HOM05D000574 ORTHO05D004834 1.6e-17 94.4 204 30.9
A01p08200 Brassica napus HOM05D000574 ORTHO05D004834 2.1e-17 94.0 204 29.9
BraA01t00766Z Brassica rapa HOM05D000574 ORTHO05D004834 2.1e-17 94.0 204 29.9
BraA03t14910Z Brassica rapa HOM05D008615 ORTHO05D021443 2.1e-17 94.0 110 43.6
Carub.0005s1047 Capsella rubella HOM05D008615 ORTHO05D021391 6.0e-17 92.4 201 34.3
BcaC09g51774 Brassica carinata HOM05D000574 ORTHO05D004834 5.1e-16 89.4 199 29.6
Carub.0004s1487 Capsella rubella HOM05D008365 ORTHO05D011149 1.1e-15 88.2 199 33.7
C03p88560 Brassica napus HOM05D008365 ORTHO05D011149 4.3e-15 86.3 198 30.3
A02p02550 Brassica napus HOM05D013859 ORTHO05D018433 4.5e-12 76.3 170 27.6
AL7G36450 Arabidopsis lyrata HOM05D013859 ORTHO05D018433 5.8e-12 75.9 194 27.8
C02p06790 Brassica napus HOM05D013859 ORTHO05D018433 7.6e-12 75.5 166 28.3
C02p06960 Brassica napus HOM05D013859 ORTHO05D018433 1.0e-11 75.1 166 28.3
BcaC03g13485 Brassica carinata HOM05D013859 ORTHO05D018433 1.3e-11 74.7 203 26.1
BcaC09g51771 Brassica carinata HOM05D016251 ORTHO05D017520 1.3e-11 74.7 194 31.4
BcaC02g10180 Brassica carinata HOM05D008615 ORTHO05D011779 1.7e-11 74.3 205 32.2
BcaC09g51927 Brassica carinata HOM05D008615 ORTHO05D031979 1.7e-11 74.3 123 38.2
Carub.0007s2333 Capsella rubella HOM05D000344 ORTHO05D003292 1.7e-11 74.3 179 29.1
C08p30540 Brassica napus HOM05D008615 ORTHO05D011779 2.2e-11 73.9 108 38.9
A08p35230 Brassica napus HOM05D011295 ORTHO05D014420 4.9e-11 72.8 178 30.9
BraA08t35431Z Brassica rapa HOM05D011295 ORTHO05D014420 4.9e-11 72.8 178 30.9
BcaNung01348 Brassica carinata HOM05D008615 ORTHO05D021443 1.1e-10 71.6 95 38.9
CARHR163030 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.4e-10 71.2 148 27.7
BcaC01g01143 Brassica carinata HOM05D008365 ORTHO05D011149 1.9e-10 70.9 232 26.7
C02p06850 Brassica napus HOM05D013859 ORTHO05D018433 3.2e-10 70.1 115 33.9
BraA02t05224Z Brassica rapa HOM05D013859 ORTHO05D018433 3.2e-10 70.1 177 26.0
BcaC07g38434 Brassica carinata HOM05D011295 ORTHO05D014420 4.2e-10 69.7 176 27.3
C08p12010 Brassica napus HOM05D011295 ORTHO05D014420 4.2e-10 69.7 176 27.3
AL6G29250 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 5.5e-10 69.3 232 27.2
BcaNung02965 Brassica carinata HOM05D008365 ORTHO05D011149 5.5e-10 69.3 172 29.1
AL1G54760 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 7.1e-10 68.9 149 28.2
BolC4t24741H Brassica oleracea HOM05D008615 ORTHO05D011779 7.1e-10 68.9 95 37.9
A08p19110 Brassica napus HOM05D008365 ORTHO05D011149 1.2e-09 68.2 233 26.2
BcaC08g44545 Brassica carinata HOM05D000331 ORTHO05D027779 3.5e-09 66.6 174 29.9
C08p13470 Brassica napus HOM05D017215 ORTHO05D031730 4.6e-09 66.2 203 27.1
CARHR237670 Cardamine hirsuta HOM05D008365 ORTHO05D011149 4.6e-09 66.2 193 29.5
CARHR263650 Cardamine hirsuta HOM05D008365 ORTHO05D014862 6.0e-09 65.9 148 28.4
AL7G22480 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 7.9e-09 65.5 232 25.9
AT3G19515 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 1.0e-08 65.1 193 25.4
BcaC06g35061 Brassica carinata HOM05D011295 ORTHO05D014420 1.0e-08 65.1 181 29.8
AL6G29230 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 1.3e-08 64.7 194 25.3
BraA08t33873Z Brassica rapa HOM05D008365 ORTHO05D011149 1.3e-08 64.7 233 27.0
Carub.0004s1486 Capsella rubella HOM05D008365 ORTHO05D011149 1.3e-08 64.7 230 24.8
CARHR063690 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.3e-08 64.7 196 27.0
BcaB03g12656 Brassica carinata HOM05D008365 ORTHO05D011149 2.3e-08 63.9 234 23.9
Sp7g27580 Schrenkiella parvula HOM05D008365 ORTHO05D011149 2.3e-08 63.9 235 25.1
AL7G22500 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 3.0e-08 63.5 163 29.4
BcaC07g38550 Brassica carinata HOM05D017215 ORTHO05D031730 8.7e-08 62.0 123 32.5
BcaC07g38433 Brassica carinata HOM05D011295 ORTHO05D014420 1.1e-07 61.6 157 28.0
BcaC09g51862 Brassica carinata HOM05D008365 ORTHO05D011149 1.1e-07 61.6 233 27.5
BolC1t00807H Brassica oleracea HOM05D008365 ORTHO05D011149 1.1e-07 61.6 233 27.5
C08p30550 Brassica napus HOM05D008615 ORTHO05D011779 1.9e-07 60.8 86 38.4
Thhalv10011766m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 1.9e-07 60.8 114 33.3
CARHR215270 Cardamine hirsuta HOM05D008365 ORTHO05D011149 7.4e-07 58.9 228 25.4
AL7G22490 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 1.3e-06 58.2 231 24.7
AT4G29760 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 2.1e-06 57.4 163 27.6
CARHR063260 Cardamine hirsuta HOM05D008365 ORTHO05D014862 2.1e-06 57.4 147 27.2
Thhalv10026005m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 3.7e-06 56.6 227 22.9
BraA08t33874Z Brassica rapa HOM05D008365 ORTHO05D011149 8.2e-06 55.5 236 21.2
CARHR170770 Cardamine hirsuta HOM05D013757 ORTHO05D018429 8.2e-06 55.5 153 31.4


User provided reference genes

Program Settings