Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p09220 Brassica napus HOM05D002666 ORTHO05D012460 2.4e-53 211.8 101 100.0
BcaC09g52199 Brassica carinata HOM05D002666 ORTHO05D012460 7.6e-36 153.7 71 100.0
C01p09210 Brassica napus HOM05D002666 ORTHO05D012460 7.6e-36 153.7 71 100.0
BolC1t00914H Brassica oleracea HOM05D002666 ORTHO05D012460 1.3e-35 152.9 71 98.6
BraA01t00769Z Brassica rapa HOM05D002666 ORTHO05D012460 8.4e-35 150.2 87 81.6
A01p08240 Brassica napus HOM05D002666 ORTHO05D012460 1.4e-34 149.4 70 97.1
C01p09190 Brassica napus HOM05D002666 ORTHO05D012460 1.3e-30 136.3 87 77.0
BolC1t00911H Brassica oleracea HOM05D002666 ORTHO05D012460 1.3e-30 136.3 87 77.0
BraA01t00768Z Brassica rapa HOM05D016251 ORTHO05D017520 1.8e-29 132.5 89 75.3
BcaC09g52201 Brassica carinata HOM05D002666 ORTHO05D012460 5.3e-29 131.0 89 74.2
BolC1t00912H Brassica oleracea HOM05D002666 ORTHO05D012460 5.3e-29 131.0 89 74.2
C01p09180 Brassica napus HOM05D002666 ORTHO05D012460 6.9e-29 130.6 87 73.6
BolC1t00909H Brassica oleracea HOM05D002666 ORTHO05D012460 6.9e-29 130.6 87 73.6
BcaC09g51772 Brassica carinata HOM05D002666 ORTHO05D012460 1.5e-28 129.4 71 85.9
BcaC09g51770 Brassica carinata HOM05D002666 ORTHO05D012460 4.2e-26 121.3 65 87.7
BcaC09g51774 Brassica carinata HOM05D000574 ORTHO05D004834 4.3e-23 111.3 71 73.2
A01p08200 Brassica napus HOM05D000574 ORTHO05D004834 5.3e-21 104.4 71 67.6
BraA01t00766Z Brassica rapa HOM05D000574 ORTHO05D004834 5.3e-21 104.4 71 67.6
Thhalv10027039m.g Eutrema salsugineum HOM05D002666 ORTHO05D012460 8.8e-16 87.0 72 59.7
Thhalv10027170m.g Eutrema salsugineum HOM05D002666 ORTHO05D012460 9.1e-13 77.0 88 48.9
AL7G44690 Arabidopsis lyrata HOM05D002666 ORTHO05D079802 4.7e-09 64.7 58 53.4
C01p09160 Brassica napus HOM05D000574 ORTHO05D004834 4.7e-09 64.7 41 68.3
AL7G44900 Arabidopsis lyrata HOM05D002666 ORTHO05D012460 4.0e-08 61.6 69 47.8
Carub.0008s2027 Capsella rubella HOM05D000001 ORTHO05D009726 2.6e-07 58.9 73 38.4
A08p11010 Brassica napus HOM05D002666 ORTHO05D004769 2.2e-06 55.8 71 49.3
BcaC01g00518 Brassica carinata HOM05D002666 ORTHO05D004769 3.7e-06 55.1 91 42.9
BolC3t20342H Brassica oleracea HOM05D002666 ORTHO05D004769 3.7e-06 55.1 91 42.9
BraA08t34119Z Brassica rapa HOM05D002666 ORTHO05D004769 3.7e-06 55.1 91 42.9
BraA08t34123Z Brassica rapa HOM05D002666 ORTHO05D004769 3.7e-06 55.1 91 42.9
A08p20500 Brassica napus HOM05D002666 ORTHO05D004769 8.2e-06 53.9 87 43.7
A08p21690 Brassica napus HOM05D002666 ORTHO05D004769 8.2e-06 53.9 72 48.6
BraA08t34120Z Brassica rapa HOM05D002666 ORTHO05D004769 8.2e-06 53.9 72 48.6


User provided reference genes

Program Settings