Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 1.5e-113 412.9 213 100.0
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 2.1e-104 382.5 211 94.3
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 3.8e-101 371.7 213 92.5
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 4.2e-100 368.2 213 91.1
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 4.2e-100 368.2 213 91.1
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 6.6e-98 360.9 211 90.0
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 1.1e-95 353.6 211 89.1
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 3.5e-91 338.6 201 88.6
C01p08410 Brassica napus HOM05D010232 ORTHO05D016018 2.9e-69 265.8 146 93.8
BolC1t00824H Brassica oleracea HOM05D010232 ORTHO05D016018 2.9e-69 265.8 146 93.8
BolC9t58524H Brassica oleracea HOM05D010232 ORTHO05D016018 2.8e-64 249.2 138 92.0
BolC4t25187H Brassica oleracea HOM05D010232 ORTHO05D032714 2.1e-59 233.0 130 91.5
BcaC02g09827 Brassica carinata HOM05D010232 ORTHO05D032714 3.6e-59 232.3 130 91.5
C04p36120 Brassica napus HOM05D010232 ORTHO05D032714 3.6e-59 232.3 130 91.5
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 9.1e-47 191.0 204 57.8
C08p05490 Brassica napus HOM05D010232 ORTHO05D103485 4.5e-46 188.7 105 92.4
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 2.5e-44 183.0 205 57.1
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 3.0e-42 176.0 209 56.0
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 3.1e-31 139.4 133 63.2
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 7.3e-28 128.3 131 60.3
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 9.5e-28 127.9 128 60.2
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 2.8e-27 126.3 126 60.3
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 1.2e-25 120.9 210 42.9
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 7.5e-25 118.2 210 42.9
BcaC09g51844 Brassica carinata HOM05D010232 ORTHO05D090321 2.9e-24 116.3 112 62.5
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 4.9e-24 115.5 200 43.5
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 4.9e-24 115.5 211 43.1
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 1.4e-23 114.0 129 57.4
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 1.4e-23 114.0 230 37.8
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 2.4e-23 113.2 162 46.3
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 2.4e-23 113.2 189 46.6
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 9.2e-23 111.3 189 46.0
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 1.6e-22 110.5 129 55.8
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 2.7e-22 109.8 189 46.6
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 7.8e-22 108.2 129 55.0
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 7.8e-22 108.2 131 54.2
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 7.8e-22 108.2 131 54.2
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 1.0e-21 107.8 163 47.9
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 5.0e-21 105.5 190 43.7
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 1.5e-20 104.0 204 41.7
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 1.9e-20 103.6 230 35.7
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 4.3e-20 102.4 173 47.4
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 5.6e-20 102.1 79 73.4
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 1.6e-19 100.5 213 39.0
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 2.1e-19 100.1 158 46.8
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 2.1e-19 100.1 221 39.4
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 2.8e-19 99.8 221 39.4
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 3.6e-19 99.4 128 54.7
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 3.6e-19 99.4 213 38.5
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 6.2e-19 98.6 221 36.2
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 6.2e-19 98.6 192 41.7
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 6.2e-19 98.6 192 41.7
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 1.0e-18 97.8 204 39.7
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 1.0e-18 97.8 173 46.2
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 1.0e-18 97.8 204 39.7
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 1.4e-18 97.4 204 40.7
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 2.3e-18 96.7 163 46.6
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 4.0e-18 95.9 200 40.5
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 6.8e-18 95.1 215 39.1
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 8.9e-18 94.7 129 51.2
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 1.2e-17 94.4 187 39.0
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 2.0e-17 93.6 204 38.2
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 2.0e-17 93.6 204 38.2
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 3.4e-17 92.8 129 49.6
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 3.4e-17 92.8 187 38.5
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 4.4e-17 92.4 222 37.4
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 5.8e-17 92.0 106 58.5
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 9.8e-17 91.3 222 37.4
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 1.3e-16 90.9 125 50.4
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 2.9e-16 89.7 129 48.1
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 4.9e-16 89.0 158 46.2
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 6.4e-16 88.6 219 38.8
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 1.4e-15 87.4 123 48.8
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 1.9e-15 87.0 103 56.3
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 2.4e-15 86.7 173 45.7
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 3.2e-15 86.3 208 37.0
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 3.2e-15 86.3 208 37.0
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 4.1e-15 85.9 160 39.4
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 5.4e-15 85.5 207 42.5
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 7.0e-15 85.1 197 40.6
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 9.2e-15 84.7 203 37.4
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 2.0e-14 83.6 139 47.5
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 2.0e-14 83.6 139 47.5
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 2.7e-14 83.2 102 54.9
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 3.5e-14 82.8 129 46.5
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 6.0e-14 82.0 163 44.2
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 6.0e-14 82.0 137 45.3
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 6.0e-14 82.0 124 49.2
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 6.0e-14 82.0 137 45.3
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 7.8e-14 81.6 192 40.6
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 7.8e-14 81.6 203 36.9
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 7.8e-14 81.6 206 36.4
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 1.0e-13 81.3 114 48.2
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 1.0e-13 81.3 199 37.2
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 1.7e-13 80.5 212 36.8
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 2.3e-13 80.1 193 38.3
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 2.3e-13 80.1 197 39.6
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 3.0e-13 79.7 130 49.2
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 5.0e-13 79.0 202 34.2
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 5.0e-13 79.0 199 37.2
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 6.6e-13 78.6 192 37.0
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 1.1e-12 77.8 202 33.7
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 1.1e-12 77.8 207 37.2
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 1.1e-12 77.8 108 47.2
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 1.1e-12 77.8 178 41.0
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 2.5e-12 76.6 209 35.9
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 4.3e-12 75.9 129 45.7
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 9.5e-12 74.7 125 48.0
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 1.2e-11 74.3 111 50.5
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 1.2e-11 74.3 130 44.6
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 1.6e-11 73.9 129 42.6
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 2.1e-11 73.6 189 39.2
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 2.1e-11 73.6 118 48.3
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 2.1e-11 73.6 118 48.3
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 2.8e-11 73.2 212 36.3
C06p21700 Brassica napus HOM05D008956 ORTHO05D100830 3.6e-11 72.8 102 45.1
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 4.7e-11 72.4 127 48.8
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 6.2e-11 72.0 163 43.6
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 6.2e-11 72.0 155 40.0
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 1.4e-10 70.9 80 57.5
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 1.8e-10 70.5 179 39.1
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 2.3e-10 70.1 206 32.5
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 3.1e-10 69.7 101 46.5
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 4.0e-10 69.3 205 33.2
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 1.5e-09 67.4 116 49.1
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 3.4e-09 66.2 220 33.6
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 3.4e-09 66.2 220 33.6
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 4.4e-09 65.9 134 40.3
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 7.5e-09 65.1 80 56.2
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 9.8e-09 64.7 218 33.9
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 9.8e-09 64.7 95 48.4
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 1.3e-08 64.3 109 45.9
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 1.7e-08 63.9 95 47.4
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 1.7e-08 63.9 162 41.4
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 3.7e-08 62.8 186 36.0
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 3.7e-08 62.8 163 39.9
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 3.7e-08 62.8 163 40.5
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 4.9e-08 62.4 163 39.3
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 6.4e-08 62.0 95 45.3
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 8.3e-08 61.6 196 37.8
C02p59180 Brassica napus HOM05D010928 ORTHO05D103551 8.3e-08 61.6 152 39.5
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 8.3e-08 61.6 179 39.7
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 8.3e-08 61.6 93 52.7
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 1.1e-07 61.2 149 40.9
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 1.1e-07 61.2 149 40.9
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 1.4e-07 60.8 161 39.1
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 2.4e-07 60.1 163 39.3
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 2.4e-07 60.1 95 46.3
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 2.4e-07 60.1 95 46.3
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 3.2e-07 59.7 163 40.5
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 3.2e-07 59.7 163 40.5
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 4.1e-07 59.3 163 39.9
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 4.1e-07 59.3 62 61.3
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 9.2e-07 58.2 159 39.0
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 9.2e-07 58.2 179 38.5
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 1.6e-06 57.4 70 57.1
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 1.6e-06 57.4 136 39.0
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 1.6e-06 57.4 75 49.3
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 1.6e-06 57.4 183 37.7
BcaC08g46075 Brassica carinata HOM05D003240 ORTHO05D019967 2.1e-06 57.0 125 32.8
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 2.1e-06 57.0 179 38.5
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 3.5e-06 56.2 63 57.1
C06p51590 Brassica napus HOM05D003240 ORTHO05D103766 6.0e-06 55.5 133 32.3


User provided reference genes

Program Settings