Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p07560 Brassica napus HOM05D000848 ORTHO05D014511 3.4e-21 104.0 50 100.0
BraA08t34927Z Brassica rapa HOM05D000848 ORTHO05D014511 3.2e-19 97.4 50 94.0
C04p30800 Brassica napus HOM05D011453 ORTHO05D014511 5.5e-19 96.7 50 92.0
A08p29920 Brassica napus HOM05D000848 ORTHO05D014511 7.2e-19 96.3 50 94.0
BraA01t03476Z Brassica rapa HOM05D011453 ORTHO05D014511 2.3e-17 91.3 50 88.0
A01p33640 Brassica napus HOM05D011453 ORTHO05D014511 3.9e-17 90.5 50 88.0
C07p58790 Brassica napus HOM05D000848 ORTHO05D003342 2.5e-16 87.8 50 88.0
C03p45200 Brassica napus HOM05D000848 ORTHO05D003342 7.4e-16 86.3 50 82.0
BolC3t16784H Brassica oleracea HOM05D053995 ORTHO05D039382 7.4e-16 86.3 50 82.0
BolC4t23375H Brassica oleracea HOM05D000848 ORTHO05D018799 7.4e-16 86.3 50 82.0
C08p45890 Brassica napus HOM05D000848 ORTHO05D003342 1.3e-15 85.5 50 82.0
BolC8t52141H Brassica oleracea HOM05D000848 ORTHO05D003342 1.3e-15 85.5 50 82.0
C08p40030 Brassica napus HOM05D000848 ORTHO05D003342 2.2e-15 84.7 50 82.0
BolC8t51574H Brassica oleracea HOM05D000848 ORTHO05D003342 2.2e-15 84.7 50 82.0
C03p85290 Brassica napus HOM05D000848 ORTHO05D003342 4.8e-15 83.6 50 80.0
BolC8t51115H Brassica oleracea HOM05D000848 ORTHO05D018799 1.1e-14 82.4 50 78.0
BolC2t06949H Brassica oleracea HOM05D000848 ORTHO05D018799 5.3e-14 80.1 50 78.0
C06p29460 Brassica napus HOM05D000848 ORTHO05D014511 9.1e-14 79.3 50 78.0
A02p29170 Brassica napus HOM05D000848 ORTHO05D021893 1.5e-13 78.6 47 76.6
A06p35370 Brassica napus HOM05D000848 ORTHO05D042488 1.7e-12 75.1 47 74.5
C02p53160 Brassica napus HOM05D000848 ORTHO05D003342 1.7e-12 75.1 47 72.3
BolC3t14006H Brassica oleracea HOM05D000848 ORTHO05D042488 1.7e-12 75.1 47 74.5
BraA10t43227Z Brassica rapa HOM05D000848 ORTHO05D003342 1.7e-12 75.1 47 74.5
BolC3t15415H Brassica oleracea HOM05D000848 ORTHO05D003342 6.5e-12 73.2 47 72.3
C01p47370 Brassica napus HOM05D000848 ORTHO05D003342 8.5e-12 72.8 47 72.3
C05p03590 Brassica napus HOM05D000848 ORTHO05D023963 7.2e-11 69.7 47 70.2
C02p59740 Brassica napus HOM05D000848 ORTHO05D003342 9.4e-11 69.3 47 70.2
C05p19580 Brassica napus HOM05D000848 ORTHO05D018799 9.4e-11 69.3 50 68.0
BolC3t17477H Brassica oleracea HOM05D000848 ORTHO05D018799 4.7e-10 67.0 47 68.1
C04p18190 Brassica napus HOM05D000253 ORTHO05D000149 6.1e-10 66.6 34 88.2
C07p23220 Brassica napus HOM05D000848 ORTHO05D018799 6.1e-10 66.6 38 81.6
BolC5t29138H Brassica oleracea HOM05D000848 ORTHO05D003342 1.0e-09 65.9 42 73.8
BolC7t43067H Brassica oleracea HOM05D000848 ORTHO05D018799 5.1e-09 63.5 40 77.5
BolC3t20213H Brassica oleracea HOM05D000005 ORTHO05D003342 6.7e-09 63.2 42 69.0
BraA08t33719Z Brassica rapa HOM05D000848 ORTHO05D011438 1.1e-08 62.4 41 70.7
BcaB07g30919 Brassica carinata HOM05D000022 ORTHO05D013684 2.6e-08 61.2 34 79.4
BraA08t34208Z Brassica rapa HOM05D000848 ORTHO05D003342 3.3e-08 60.8 44 59.1
A09p11910 Brassica napus HOM05D000848 ORTHO05D021665 4.4e-08 60.5 41 63.4
BraA01t01623Z Brassica rapa HOM05D000848 ORTHO05D003342 4.4e-08 60.5 43 62.8
BraA01t03173Z Brassica rapa HOM05D000848 ORTHO05D003342 4.4e-08 60.5 43 62.8
A03p40520 Brassica napus HOM05D000848 ORTHO05D011438 5.7e-08 60.1 41 68.3
A04p29760 Brassica napus HOM05D000848 ORTHO05D011438 5.7e-08 60.1 41 68.3
A07p30110 Brassica napus HOM05D000848 ORTHO05D011438 5.7e-08 60.1 41 68.3
C05p38860 Brassica napus HOM05D000848 ORTHO05D011438 5.7e-08 60.1 41 68.3
C06p21550 Brassica napus HOM05D000848 ORTHO05D022013 5.7e-08 60.1 41 68.3
BolC2t11807H Brassica oleracea HOM05D000848 ORTHO05D011438 5.7e-08 60.1 41 68.3
BolC5t32626H Brassica oleracea HOM05D000848 ORTHO05D011438 5.7e-08 60.1 41 68.3
C01p33860 Brassica napus HOM05D000848 ORTHO05D003342 7.4e-08 59.7 42 61.9
A08p19830 Brassica napus HOM05D000848 ORTHO05D003342 1.3e-07 58.9 44 56.8
A07p10430 Brassica napus HOM05D000848 ORTHO05D011438 1.7e-07 58.5 41 63.4
C03p07760 Brassica napus HOM05D000848 ORTHO05D011438 1.7e-07 58.5 41 63.4
C03p25830 Brassica napus HOM05D000848 ORTHO05D003342 1.7e-07 58.5 41 63.4
BraA03t10164Z Brassica rapa HOM05D000848 ORTHO05D011438 1.7e-07 58.5 41 63.4
A10p03850 Brassica napus HOM05D013019 ORTHO05D015498 2.8e-07 57.8 34 79.4
BraA09t42035Z Brassica rapa HOM05D000848 ORTHO05D003342 2.8e-07 57.8 44 56.8
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 3.7e-07 57.4 31 83.9
BolC9t59335H Brassica oleracea HOM05D000848 ORTHO05D003342 3.7e-07 57.4 40 62.5
A08p17690 Brassica napus HOM05D000848 ORTHO05D011438 4.8e-07 57.0 41 65.9
C01p38710 Brassica napus HOM05D000848 ORTHO05D003342 6.3e-07 56.6 42 59.5
BolC8t52729H Brassica oleracea HOM05D000848 ORTHO05D011438 6.3e-07 56.6 41 63.4
A02p15040 Brassica napus HOM05D013019 ORTHO05D015498 8.2e-07 56.2 37 70.3
C01p28500 Brassica napus HOM05D000848 ORTHO05D003342 1.1e-06 55.8 43 58.1
C02p52650 Brassica napus HOM05D000848 ORTHO05D003342 1.1e-06 55.8 45 53.3
C03p47180 Brassica napus HOM05D027968 ORTHO05D003342 1.1e-06 55.8 45 53.3
C07p42200 Brassica napus HOM05D000848 ORTHO05D003342 1.1e-06 55.8 45 53.3
C08p05040 Brassica napus HOM05D000848 ORTHO05D003342 1.1e-06 55.8 45 53.3
BolC8t52707H Brassica oleracea HOM05D000165 ORTHO05D003102 1.1e-06 55.8 48 54.2
A02p09070 Brassica napus HOM05D000848 ORTHO05D003342 1.4e-06 55.5 42 57.1
C02p54660 Brassica napus HOM05D000848 ORTHO05D011438 1.8e-06 55.1 37 67.6
C03p29700 Brassica napus HOM05D000848 ORTHO05D011438 1.8e-06 55.1 37 67.6
C08p27780 Brassica napus HOM05D000848 ORTHO05D011438 1.8e-06 55.1 41 63.4
BolC6t37603H Brassica oleracea HOM05D000848 ORTHO05D021665 2.4e-06 54.7 41 58.5
BolC2t11819H Brassica oleracea HOM05D000848 ORTHO05D015498 3.1e-06 54.3 37 64.9
BcaB02g08198 Brassica carinata HOM05D000848 ORTHO05D003342 4.1e-06 53.9 40 60.0
A09p62030 Brassica napus HOM05D000848 ORTHO05D003342 4.1e-06 53.9 41 58.5
C01p00830 Brassica napus HOM05D000848 ORTHO05D021910 4.1e-06 53.9 41 56.1
C05p58720 Brassica napus HOM05D000848 ORTHO05D021910 4.1e-06 53.9 41 56.1
C03p48860 Brassica napus HOM05D000848 ORTHO05D021893 5.3e-06 53.5 32 68.8
BolC3t14784H Brassica oleracea HOM05D000848 ORTHO05D003342 5.3e-06 53.5 45 51.1
A08p34910 Brassica napus HOM05D000848 ORTHO05D003342 9.1e-06 52.8 41 56.1


User provided reference genes

Program Settings