Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 8.0e-194 680.2 345 100.0
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 3.2e-182 641.7 345 95.7
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 4.7e-178 627.9 346 93.9
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.1e-177 626.7 345 93.6
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 3.3e-147 525.4 365 80.5
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 2.8e-146 522.3 355 81.4
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 2.4e-142 509.2 361 78.4
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.1e-137 493.8 362 76.8
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 1.2e-136 490.3 362 76.0
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 1.7e-135 486.5 361 75.3
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 2.9e-135 485.7 362 75.7
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 8.4e-135 484.2 362 75.4
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 9.3e-134 480.7 359 76.0
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 4.1e-129 465.3 362 74.9
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 2.2e-127 459.5 362 72.7
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 2.3e-124 449.5 333 76.3
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 4.4e-91 339.0 361 56.8
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 4.1e-73 279.3 362 53.0
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 2.5e-46 190.3 409 37.7
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 1.2e-45 188.0 416 36.3
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 1.6e-45 187.6 145 70.3
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.8e-44 184.1 402 37.8
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 3.1e-44 183.3 214 53.7
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 9.0e-44 181.8 399 37.1
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 1.2e-43 181.4 140 71.4
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 1.5e-43 181.0 409 37.4
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 3.4e-43 179.9 407 37.1
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 4.4e-43 179.5 433 36.3
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 2.9e-42 176.8 414 37.2
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.1e-41 174.9 354 39.3
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 1.4e-41 174.5 431 36.7
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 1.4e-41 174.5 416 37.5
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.9e-41 174.1 423 35.5
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 4.2e-41 172.9 407 36.1
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 4.2e-41 172.9 327 40.7
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 9.3e-41 171.8 409 37.4
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 1.2e-40 171.4 400 35.8
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 2.1e-40 170.6 409 36.7
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 3.5e-40 169.9 416 35.1
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 7.8e-40 168.7 324 39.5
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.3e-39 167.9 425 36.5
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.7e-39 167.5 331 39.6
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 2.3e-39 167.2 405 35.3
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 3.0e-39 166.8 375 38.1
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 8.7e-39 165.2 414 35.7
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.1e-38 164.9 376 37.5
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 1.5e-38 164.5 345 38.8
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.5e-38 164.5 406 36.0
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.5e-38 163.7 423 36.2
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 4.3e-38 162.9 310 41.0
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 7.3e-38 162.2 407 35.1
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 7.3e-38 162.2 418 35.6
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 7.3e-38 162.2 410 35.4
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 1.6e-37 161.0 419 36.3
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 3.6e-37 159.8 405 34.6
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 4.8e-37 159.5 320 39.7
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 4.8e-37 159.5 411 35.8
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 6.2e-37 159.1 415 35.4
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 6.2e-37 159.1 417 36.0
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 3.1e-36 156.8 395 34.7
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 9.0e-36 155.2 404 34.4
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 5.8e-35 152.5 392 33.7
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 5.8e-35 152.5 329 38.0
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 7.6e-35 152.1 414 34.1
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 7.6e-35 152.1 350 35.7
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 3.8e-34 149.8 414 33.8
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 4.9e-34 149.4 463 32.8
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 6.4e-34 149.1 313 37.1
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.9e-33 147.5 300 39.0
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 4.2e-33 146.4 389 36.2
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 1.2e-32 144.8 405 33.1
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.6e-32 144.4 321 35.5
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.6e-32 144.4 321 35.5
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 2.7e-32 143.7 335 37.6
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.7e-32 143.7 345 36.5
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 4.6e-32 142.9 350 34.3
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 7.9e-32 142.1 323 36.5
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 1.0e-31 141.7 343 37.9
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 3.9e-31 139.8 404 31.9
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 3.9e-31 139.8 337 36.2
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 3.9e-31 139.8 330 39.1
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 3.9e-31 139.8 380 32.9
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 5.1e-31 139.4 320 36.9
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 8.7e-31 138.7 402 34.1
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.5e-30 137.9 327 37.3
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 1.5e-30 137.9 334 35.9
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.6e-30 136.0 409 33.7
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 9.6e-30 135.2 326 37.7
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 1.3e-29 134.8 108 68.5
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 1.3e-29 134.8 108 68.5
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 2.8e-29 133.7 322 37.9
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.1e-28 131.7 263 38.0
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 1.4e-28 131.3 438 32.2
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.8e-28 131.0 349 34.4
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 1.8e-28 131.0 309 35.9
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 3.1e-28 130.2 355 33.0
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 4.0e-28 129.8 309 37.2
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 6.9e-28 129.0 218 42.7
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 9.0e-28 128.6 304 38.8
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 4.5e-27 126.3 315 35.9
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 1.3e-26 124.8 361 33.2
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 1.3e-26 124.8 439 31.4
CARHR240540 Cardamine hirsuta HOM05D005141 ORTHO05D006250 1.7e-26 124.4 79 78.5
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 2.9e-26 123.6 278 35.3
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 3.8e-26 123.2 273 37.0
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 6.4e-26 122.5 305 36.4
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 8.4e-26 122.1 327 35.8
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 8.4e-26 122.1 326 34.7
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 4.2e-25 119.8 310 35.2
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 1.2e-24 118.2 331 34.4
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 1.0e-23 115.2 269 36.8
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 1.3e-23 114.8 228 39.9
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 3.9e-23 113.2 369 32.2
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 5.1e-23 112.8 255 37.6
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 8.7e-23 112.1 480 29.6
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 8.7e-23 112.1 303 33.7
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.9e-22 110.9 271 36.2
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 8.2e-21 105.5 319 29.8
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.8e-20 104.4 139 49.6
BolC9t58511H Brassica oleracea HOM05D005141 ORTHO05D006250 3.1e-20 103.6 72 72.2
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 4.0e-20 103.2 197 38.6
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 1.5e-19 101.3 250 32.4
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 2.6e-19 100.5 302 32.1
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 4.5e-19 99.8 311 31.2
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 1.0e-18 98.6 288 31.2
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 6.5e-18 95.9 336 31.8
CARHR240550 Cardamine hirsuta HOM05D005141 ORTHO05D006250 3.0e-15 87.0 57 77.2
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 3.9e-15 86.7 121 43.0
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 4.3e-14 83.2 120 44.2
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 7.4e-14 82.4 131 44.3
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.8e-12 77.8 146 39.0
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 4.1e-12 76.6 163 34.4
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 9.0e-12 75.5 166 33.7
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.2e-11 75.1 125 40.0
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 2.0e-11 74.3 113 44.2
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 4.5e-11 73.2 107 43.0
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 6.5e-10 69.3 125 41.6
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 9.3e-09 65.5 113 39.8
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 1.4e-07 61.6 70 44.3


User provided reference genes

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