Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 1.8e-103 379.4 207 100.0
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 1.0e-79 300.4 176 94.9
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 2.3e-79 299.3 184 91.8
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 4.5e-75 285.0 187 87.2
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 8.5e-74 280.8 187 87.7
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 2.6e-70 269.2 192 82.8
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 7.7e-67 257.7 206 75.7
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 4.2e-65 251.9 194 77.8
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 8.0e-64 247.7 197 76.1
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 8.0e-64 247.7 197 76.1
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.2e-62 243.8 193 77.2
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 3.3e-62 242.3 184 78.8
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.3e-61 240.4 185 77.8
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 1.4e-60 236.9 185 75.1
AL7G19270 Arabidopsis lyrata HOM05D002156 ORTHO05D003919 6.5e-58 228.0 184 75.0
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.6e-56 223.4 185 72.4
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 1.8e-55 219.9 211 67.3
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 4.0e-55 218.8 185 70.8
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 3.8e-50 202.2 198 65.7
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.8e-47 193.4 186 65.6
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.6e-19 100.5 163 38.7
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 4.6e-19 99.0 203 39.4
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 6.0e-19 98.6 165 38.8
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.0e-18 97.8 132 45.5
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.3e-18 97.4 164 39.6
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 1.3e-18 97.4 134 44.0
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 3.0e-18 96.3 134 45.5
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 8.6e-18 94.7 134 41.8
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 8.6e-18 94.7 175 38.9
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 8.6e-18 94.7 182 38.5
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 8.6e-18 94.7 168 38.1
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 1.5e-17 94.0 182 38.5
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.9e-17 93.6 169 37.9
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.9e-17 93.6 178 34.8
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 2.5e-17 93.2 165 40.0
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 5.6e-17 92.0 178 34.8
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 7.3e-17 91.7 159 35.8
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 1.2e-16 90.9 176 35.8
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.6e-16 90.5 181 37.0
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 1.6e-16 90.5 161 39.1
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.8e-16 89.7 137 39.4
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 3.6e-16 89.4 153 39.9
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 8.1e-16 88.2 189 36.5
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 2.4e-15 86.7 163 36.8
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 5.2e-15 85.5 163 39.3
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 6.8e-15 85.1 190 35.3
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 6.8e-15 85.1 157 36.3
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 8.9e-15 84.7 166 35.5
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 8.9e-15 84.7 167 40.7
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 1.2e-14 84.3 167 41.9
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 1.2e-14 84.3 125 37.6
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 2.0e-14 83.6 125 37.6
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 3.4e-14 82.8 200 34.0
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 3.4e-14 82.8 166 33.7
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 3.4e-14 82.8 167 35.9
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 3.4e-14 82.8 155 35.5
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 4.4e-14 82.4 183 34.4
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 9.9e-14 81.3 134 39.6
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 9.9e-14 81.3 155 35.5
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 1.3e-13 80.9 129 36.4
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 1.3e-13 80.9 129 36.4
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.3e-13 80.9 169 37.3
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 1.7e-13 80.5 132 40.9
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 2.9e-13 79.7 136 39.0
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 2.9e-13 79.7 166 33.1
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 8.4e-13 78.2 136 41.2
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 8.4e-13 78.2 160 34.4
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 1.1e-12 77.8 169 33.1
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.4e-12 77.4 154 35.7
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.4e-12 77.4 162 37.0
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 1.9e-12 77.0 135 40.7
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 2.4e-12 76.6 187 35.3
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 3.2e-12 76.3 181 33.1
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 3.2e-12 76.3 181 33.7
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 4.2e-12 75.9 122 36.1
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 5.4e-12 75.5 128 35.9
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 5.4e-12 75.5 131 36.6
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 7.1e-12 75.1 207 32.9
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 9.2e-12 74.7 161 32.9
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 9.2e-12 74.7 193 30.6
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 1.2e-11 74.3 167 31.7
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 2.1e-11 73.6 129 35.7
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 2.7e-11 73.2 173 34.1
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 3.5e-11 72.8 184 31.5
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 4.6e-11 72.4 142 34.5
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 4.6e-11 72.4 160 36.9
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 3.0e-10 69.7 132 36.4
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 5.1e-10 68.9 133 35.3
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 6.6e-10 68.6 125 36.0
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 6.6e-10 68.6 126 35.7
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 8.7e-10 68.2 125 36.0
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 8.7e-10 68.2 125 36.0
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 8.7e-10 68.2 127 35.4
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 1.1e-09 67.8 174 34.5
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.1e-09 67.8 133 35.3
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 1.5e-09 67.4 133 34.6
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.5e-09 67.4 133 34.6
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 1.5e-09 67.4 122 32.8
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 1.9e-09 67.0 160 33.8
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 1.9e-09 67.0 108 40.7
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 3.3e-09 66.2 141 34.8
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 3.3e-09 66.2 192 27.1
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.3e-09 65.9 133 34.6
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 5.6e-09 65.5 176 30.7
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 7.3e-09 65.1 177 30.5
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 9.6e-09 64.7 176 30.1
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.2e-08 64.3 137 34.3
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.2e-08 64.3 158 36.1
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 1.6e-08 63.9 133 32.3
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 1.6e-08 63.9 157 32.5
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 2.1e-08 63.5 173 31.8
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 2.8e-08 63.2 133 34.6
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 3.6e-08 62.8 124 35.5
Potri.006G244600 Populus trichocarpa HOM05D003500 ORTHO05D003919 3.6e-08 62.8 139 35.3
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 4.7e-08 62.4 186 31.7
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 8.1e-08 61.6 170 30.0
Sabra06G0191500 Salix brachista HOM05D003500 ORTHO05D003919 4.0e-07 59.3 157 36.9
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 5.3e-07 58.9 147 28.6
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 6.9e-07 58.5 129 35.7
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.5e-06 57.4 131 33.6
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 2.0e-06 57.0 178 30.9
Os01g0863400 Oryza sativa ssp. japonica HOM05D003500 ORTHO05D003919 2.6e-06 56.6 184 27.2
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 2.6e-06 56.6 188 30.3
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 4.4e-06 55.8 198 29.8
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 4.4e-06 55.8 125 30.4
Zm00001eb366780 Zea mays HOM05D039918 ORTHO05D003919 7.6e-06 55.1 179 31.8
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 9.9e-06 54.7 132 33.3
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 9.9e-06 54.7 126 31.7


User provided reference genes

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