Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 8.6e-201 703.4 337 100.0
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 8.6e-201 703.4 337 100.0
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 1.3e-164 583.2 354 85.6
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 2.5e-163 578.9 354 85.3
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 5.3e-150 534.6 356 78.7
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 5.9e-149 531.2 350 81.1
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.0e-148 530.4 358 77.7
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 2.9e-148 528.9 357 77.9
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 4.4e-144 515.0 326 81.3
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 3.1e-142 508.8 355 76.6
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 3.1e-142 508.8 355 76.6
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 1.2e-141 506.9 354 76.3
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 2.2e-140 502.7 364 74.5
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 4.2e-139 498.4 365 74.0
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 2.7e-138 495.7 366 74.0
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 3.3e-136 488.8 354 72.0
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.1e-123 447.2 354 67.2
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 1.5e-104 383.6 353 59.8
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 5.8e-104 381.7 284 67.6
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.2e-103 379.8 281 66.5
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.1e-102 377.5 352 57.4
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.0e-102 374.8 354 56.5
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 7.0e-102 374.8 307 61.9
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 9.2e-102 374.4 307 61.6
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.6e-101 373.6 272 66.5
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 6.0e-101 371.7 360 58.3
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 1.5e-99 367.1 210 78.1
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.5e-99 367.1 210 78.1
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.5e-99 367.1 210 78.1
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.5e-99 367.1 210 78.1
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 3.3e-99 365.9 272 66.2
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 4.3e-99 365.5 239 71.5
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 5.6e-99 365.2 288 61.8
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 7.3e-99 364.8 206 78.6
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 1.6e-98 363.6 295 60.7
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 2.1e-98 363.2 238 71.0
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 2.8e-98 362.8 272 66.5
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 8.1e-98 361.3 313 59.7
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 8.1e-98 361.3 206 78.6
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.1e-97 360.9 277 66.1
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 1.8e-97 360.1 346 54.6
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.3e-97 359.8 272 65.4
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 3.1e-97 359.4 207 79.2
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 3.1e-97 359.4 273 64.1
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 4.0e-97 359.0 275 65.5
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 6.8e-97 358.2 206 78.6
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 1.2e-96 357.5 229 70.7
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 5.8e-96 355.1 264 65.5
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 5.8e-96 355.1 225 72.0
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 9.8e-96 354.4 236 69.5
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.7e-95 353.6 289 60.9
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 2.2e-95 353.2 288 60.8
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 2.9e-95 352.8 241 68.9
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 4.9e-95 352.1 286 60.8
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 6.4e-95 351.7 210 77.1
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 1.1e-94 350.9 257 66.9
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 1.1e-94 350.9 207 76.8
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 1.4e-94 350.5 207 76.8
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.9e-94 350.1 236 69.1
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 2.4e-94 349.7 233 70.8
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 2.4e-94 349.7 284 62.3
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 2.4e-94 349.7 332 57.5
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 3.2e-94 349.4 207 77.8
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 3.2e-94 349.4 322 56.2
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 3.5e-93 345.9 206 73.8
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 4.6e-93 345.5 205 75.1
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 6.0e-93 345.1 352 54.8
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 6.0e-93 345.1 207 74.4
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.0e-92 344.4 207 76.3
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 1.3e-92 344.0 203 77.3
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 1.3e-92 344.0 207 75.8
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.7e-92 343.6 258 65.5
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 3.0e-92 342.8 289 60.2
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 3.0e-92 342.8 208 75.0
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 3.0e-92 342.8 206 74.3
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 3.0e-92 342.8 207 75.8
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 3.9e-92 342.4 206 77.2
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 3.9e-92 342.4 202 75.7
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 3.9e-92 342.4 206 74.3
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 5.1e-92 342.0 242 68.2
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 6.6e-92 341.7 205 76.1
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 8.6e-92 341.3 207 74.4
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.9e-91 340.1 352 54.0
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 1.9e-91 340.1 209 75.6
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.9e-91 340.1 288 60.4
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 2.5e-91 339.7 205 74.1
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 9.5e-91 337.8 345 52.8
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 9.5e-91 337.8 234 67.5
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 9.5e-91 337.8 289 58.8
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 1.2e-90 337.4 202 73.8
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.2e-90 337.4 286 59.1
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 1.2e-90 337.4 195 76.4
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 2.1e-90 336.7 207 72.9
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.6e-90 335.9 207 74.4
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 4.7e-90 335.5 273 60.8
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 8.1e-90 334.7 195 77.4
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 8.1e-90 334.7 289 58.5
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.1e-89 334.3 205 75.1
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 3.1e-89 332.8 165 90.3
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 3.1e-89 332.8 205 75.1
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 4.0e-89 332.4 351 52.7
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 2.6e-88 329.7 226 68.6
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 4.4e-88 328.9 207 72.5
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 5.8e-88 328.6 203 74.4
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 1.3e-87 327.4 296 56.8
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 3.7e-87 325.9 255 63.1
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 3.2e-86 322.8 204 72.5
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 7.1e-86 321.6 231 67.1
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 9.2e-86 321.2 231 67.1
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.2e-85 320.9 275 57.8
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.1e-85 320.1 278 57.9
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.1e-85 320.1 257 61.9
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.7e-84 317.0 205 69.3
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 2.3e-84 316.6 209 68.9
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 4.7e-82 308.9 320 52.5
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 7.6e-80 301.6 216 63.0
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 1.7e-79 300.4 214 64.5
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 2.5e-75 286.6 207 63.8
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.3e-74 284.3 215 59.1
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 7.6e-72 275.0 305 46.9
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 6.0e-69 265.4 196 60.2
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.0e-68 264.6 162 70.4
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 1.5e-64 250.8 151 70.9
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 2.6e-64 250.0 160 68.1
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 9.3e-62 241.5 137 81.0
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 4.6e-61 239.2 224 54.0
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 1.0e-60 238.0 144 72.9
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 1.6e-58 230.7 138 76.1
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 5.5e-54 215.7 201 52.7
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 5.1e-52 209.1 124 71.0
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.5e-46 190.3 150 60.7
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 8.7e-44 181.8 179 49.2
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 8.2e-42 175.3 152 54.6
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 7.2e-30 135.6 112 53.6
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.9e-22 110.9 83 55.4
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 6.3e-18 95.9 138 47.1
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 7.0e-17 92.4 120 50.0
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 5.9e-16 89.4 52 82.7
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 1.8e-12 77.8 46 82.6
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 4.0e-12 76.6 51 76.5
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 4.0e-12 76.6 45 86.7
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.7e-11 72.8 47 72.3
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 3.5e-08 63.5 44 70.5
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 7.7e-08 62.4 34 70.6


User provided reference genes

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