Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p05520 Brassica napus HOM05D009632 ORTHO05D011780 5.2e-27 123.6 62 100.0
BolC1t00532H Brassica oleracea HOM05D009632 ORTHO05D011780 5.2e-27 123.6 62 100.0
A01p05060 Brassica napus HOM05D009632 ORTHO05D011780 1.0e-22 109.4 62 88.7
C01p05530 Brassica napus HOM05D009632 ORTHO05D011780 1.0e-22 109.4 62 90.3
BraA01t00488Z Brassica rapa HOM05D009632 ORTHO05D011780 1.0e-22 109.4 62 88.7
C01p05490 Brassica napus HOM05D009632 ORTHO05D011780 1.3e-22 109.0 62 88.7
BolC1t00529H Brassica oleracea HOM05D009632 ORTHO05D011780 1.3e-22 109.0 62 88.7
A01p05050 Brassica napus HOM05D009632 ORTHO05D011780 3.0e-22 107.8 62 87.1
C01p05510 Brassica napus HOM05D009632 ORTHO05D011780 3.0e-22 107.8 62 87.1
BraA01t00487Z Brassica rapa HOM05D009632 ORTHO05D011780 3.0e-22 107.8 62 87.1
BcaC09g52120 Brassica carinata HOM05D009632 ORTHO05D011780 6.6e-22 106.7 62 87.1
BolC1t00533H Brassica oleracea HOM05D009632 ORTHO05D011780 8.6e-22 106.3 62 88.7
BcaC09g52121 Brassica carinata HOM05D009632 ORTHO05D011780 1.5e-21 105.5 60 88.3
BolC1t00531H Brassica oleracea HOM05D009632 ORTHO05D011780 1.5e-21 105.5 62 85.5
C01p05480 Brassica napus HOM05D009632 ORTHO05D011780 4.3e-21 104.0 62 85.5
BolC1t00528H Brassica oleracea HOM05D009632 ORTHO05D011780 4.3e-21 104.0 62 85.5
A01p05040 Brassica napus HOM05D009632 ORTHO05D011780 7.3e-21 103.2 62 83.9
BraA01t00486Z Brassica rapa HOM05D009632 ORTHO05D011780 7.3e-21 103.2 62 83.9
A01p05030 Brassica napus HOM05D009632 ORTHO05D011780 1.2e-20 102.4 60 85.0
BraA01t00485Z Brassica rapa HOM05D009632 ORTHO05D011780 1.2e-20 102.4 60 85.0
BcaC09g52119 Brassica carinata HOM05D009632 ORTHO05D011780 2.8e-20 101.3 63 85.7
Sp7g30890 Schrenkiella parvula HOM05D009632 ORTHO05D011780 2.6e-18 94.7 62 80.6
Sp7g09720 Schrenkiella parvula HOM05D009632 ORTHO05D011780 7.5e-18 93.2 62 79.0
BolC3t15042H Brassica oleracea HOM05D009632 ORTHO05D011780 9.5e-13 76.3 46 80.4
CARHR241170 Cardamine hirsuta HOM05D009632 ORTHO05D011780 8.1e-12 73.2 73 60.3
AL7G18420 Arabidopsis lyrata HOM05D009632 ORTHO05D011780 1.5e-10 68.9 67 61.2
AT4G33145 Arabidopsis thaliana HOM05D009632 ORTHO05D011780 2.0e-10 68.6 63 58.7
AL3G53090 Arabidopsis lyrata HOM05D009632 ORTHO05D011780 1.7e-06 55.5 67 50.7
Thhalv10026685m.g Eutrema salsugineum HOM05D045400 ORTHO05D045368 3.9e-06 54.3 60 53.3
C03p26550 Brassica napus HOM05D056085 ORTHO05D098111 5.1e-06 53.9 32 84.4


User provided reference genes

Program Settings