Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p05220 Brassica napus HOM05D010996 ORTHO05D009840 2.5e-50 201.8 102 100.0
BolC1t00501H Brassica oleracea HOM05D010996 ORTHO05D009840 2.5e-50 201.8 102 100.0
A01p04810 Brassica napus HOM05D010996 ORTHO05D009840 3.5e-44 181.4 102 93.1
BraA01t00464Z Brassica rapa HOM05D010996 ORTHO05D009840 3.5e-44 181.4 102 93.1
BcaC09g52160 Brassica carinata HOM05D010996 ORTHO05D009840 4.5e-44 181.0 103 91.3
A03p62020 Brassica napus HOM05D010996 ORTHO05D009840 9.7e-39 163.3 100 87.0
BraA03t15242Z Brassica rapa HOM05D010996 ORTHO05D009840 9.7e-39 163.3 100 87.0
BcaNung02175 Brassica carinata HOM05D010996 ORTHO05D009840 6.3e-38 160.6 98 86.7
C07p59670 Brassica napus HOM05D010996 ORTHO05D009840 8.2e-38 160.2 100 85.0
Sp7g31170 Schrenkiella parvula HOM05D010996 ORTHO05D009840 1.0e-35 153.3 101 80.2
BolC7t46412H Brassica oleracea HOM05D010996 ORTHO05D009840 1.8e-32 142.5 90 84.4
AT4G33467 Arabidopsis thaliana HOM05D010996 ORTHO05D009840 2.3e-32 142.1 103 70.9
CARHR241540 Cardamine hirsuta HOM05D010996 ORTHO05D009840 1.3e-30 136.3 102 69.6
AL7G18090 Arabidopsis lyrata HOM05D010996 ORTHO05D009840 2.2e-30 135.6 101 69.3
Thhalv10026675m.g Eutrema salsugineum HOM05D010996 ORTHO05D009840 2.4e-29 132.1 95 76.8
Carub.0007s0701 Capsella rubella HOM05D010996 ORTHO05D009840 1.0e-27 126.7 105 62.9
BcaNung05339 Brassica carinata HOM05D000119 ORTHO05D000054 2.5e-18 95.5 105 56.2
THA.LOC104819498 Tarenaya hassleriana HOM05D010996 ORTHO05D009840 9.8e-15 83.6 96 55.2
Aa31sc146G10 Aethionema arabicum HOM05D010996 ORTHO05D009840 3.9e-11 71.6 54 68.5
Aqoxy5G02237 Aquilegia oxysepala HOM05D008093 ORTHO05D009840 1.2e-09 66.6 99 45.5
MD02G1150700 Malus domestica HOM05D008093 ORTHO05D009840 2.1e-09 65.9 92 42.4
QL06p028766 Quercus lobata HOM05D008093 ORTHO05D009840 6.2e-09 64.3 96 42.7
MELO3C023245.2 Cucumis melo HOM05D008093 ORTHO05D009840 1.4e-08 63.2 103 45.6
Oeu033661.1 Olea europaea HOM05D008093 ORTHO05D009840 2.3e-08 62.4 101 44.6
Thecc.01G130900 Theobroma cacao HOM05D008093 ORTHO05D009840 3.1e-08 62.0 91 41.8
ClCG02G000540 Citrullus lanatus HOM05D008093 ORTHO05D009840 6.8e-08 60.8 101 45.5
Duzib264G0739 Durio zibethinus HOM05D008093 ORTHO05D009840 8.9e-08 60.5 100 44.0
Potri.005G058800 Populus trichocarpa HOM05D008093 ORTHO05D009840 1.2e-07 60.1 104 40.4
Peaxi162Scf00589g00323 Petunia axillaris HOM05D008093 ORTHO05D009840 2.6e-07 58.9 99 41.4
QL06p028768 Quercus lobata HOM05D008093 ORTHO05D009840 2.6e-07 58.9 50 58.0
Nitab4.5_0002667g0080 Nicotiana tabacum HOM05D008093 ORTHO05D009840 3.4e-07 58.5 98 44.9
CsaV3_2G018270 Cucumis sativus L. HOM05D008093 ORTHO05D009840 4.4e-07 58.2 101 45.5
Gohir.A05G385600 Gossypium hirsutum HOM05D008093 ORTHO05D009840 4.4e-07 58.2 101 38.6
Oeu042288.1 Olea europaea HOM05D008093 ORTHO05D009840 4.4e-07 58.2 101 40.6
CiPaw.04G083000 Carya illinoinensis HOM05D008093 ORTHO05D009840 7.5e-07 57.4 95 41.1
Sed0027082 Sechium edule HOM05D008093 ORTHO05D009840 7.5e-07 57.4 97 40.2
Hma1.2p1_0476F.1_g160900 Hydrangea macrophylla HOM05D008093 ORTHO05D009840 9.8e-07 57.0 94 43.6
Nn5g28574 Nelumbo nucifera HOM05D008093 ORTHO05D009840 9.8e-07 57.0 92 43.5
Nitab4.5_0000856g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 9.8e-07 57.0 98 46.9
Sopen11g001870 Solanum pennellii HOM05D008093 ORTHO05D009840 9.8e-07 57.0 100 40.0
COL.COLO4_35729 Corchorus olitorius HOM05D008093 ORTHO05D009840 1.3e-06 56.6 101 37.6
Manes.12G154600 Manihot esculenta HOM05D008093 ORTHO05D009840 1.3e-06 56.6 56 53.6
Ciclev10002949m.g Citrus clementina HOM05D008093 ORTHO05D009840 1.7e-06 56.2 91 38.5
Nitab4.5_0013695g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 1.7e-06 56.2 81 44.4
MD15G1265300 Malus domestica HOM05D008093 ORTHO05D009840 2.9e-06 55.5 92 41.3
PGSC0003DMG400028663 Solanum tuberosum HOM05D008093 ORTHO05D009840 2.9e-06 55.5 97 39.2
Cc07_g18370 Coffea canephora HOM05D008093 ORTHO05D009840 4.9e-06 54.7 93 40.9
Gorai.012G034100 Gossypium raimondii HOM05D008093 ORTHO05D009840 6.4e-06 54.3 54 50.0
Solyc11g005930.2 Solanum lycopersicum HOM05D008093 ORTHO05D009840 6.4e-06 54.3 99 39.4


User provided reference genes

Program Settings