Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 1.7e-177 625.9 327 100.0
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 3.8e-169 598.2 311 99.7
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 8.0e-151 537.3 327 88.1
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 1.6e-146 523.1 331 88.2
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 1.2e-143 513.5 338 84.6
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 6.3e-140 501.1 342 82.7
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 5.0e-137 491.5 275 93.8
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 8.5e-137 490.7 340 81.5
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 1.5e-136 490.0 340 80.9
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 9.5e-120 434.1 297 80.1
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 5.6e-104 381.7 345 64.3
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 6.2e-103 378.3 347 62.8
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 7.5e-101 371.3 352 62.8
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 4.9e-100 368.6 323 61.9
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 7.1e-99 364.8 335 61.8
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 2.7e-98 362.8 344 60.8
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.3e-97 360.5 346 61.0
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 3.0e-97 359.4 346 61.0
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 2.8e-95 352.8 330 62.4
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 3.6e-95 352.4 221 78.3
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 8.1e-95 351.3 236 72.0
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 3.1e-94 349.4 342 59.6
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 5.2e-94 348.6 211 79.6
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 5.2e-94 348.6 245 70.6
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 5.2e-94 348.6 338 59.2
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.8e-94 348.2 236 71.6
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 1.2e-93 347.4 247 69.6
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.2e-93 347.4 339 61.1
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 1.2e-93 347.4 248 71.0
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.5e-93 347.1 340 59.4
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 1.5e-93 347.1 302 62.6
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 1.5e-93 347.1 269 66.9
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.5e-93 347.1 326 59.8
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 2.6e-93 346.3 246 70.7
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 3.4e-93 345.9 344 59.9
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 4.4e-93 345.5 334 60.8
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 2.2e-92 343.2 262 66.4
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 3.8e-92 342.4 347 55.3
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.9e-92 342.0 234 72.2
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 8.4e-92 341.3 214 77.6
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 8.4e-92 341.3 323 60.1
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 8.4e-92 341.3 344 57.3
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 4.2e-91 339.0 342 59.1
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 4.2e-91 339.0 247 79.8
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 5.4e-91 338.6 339 56.0
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 9.3e-91 337.8 210 78.1
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 1.2e-90 337.4 229 71.6
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 3.5e-90 335.9 233 72.5
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 2.3e-89 333.2 261 65.5
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 3.0e-89 332.8 224 75.9
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 6.6e-89 331.6 262 66.0
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 8.7e-89 331.3 255 63.9
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 8.7e-89 331.3 202 79.7
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.1e-87 326.6 339 56.0
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 3.6e-87 325.9 331 57.1
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 3.6e-87 325.9 297 59.6
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 3.6e-87 325.9 310 56.1
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 6.2e-87 325.1 333 58.0
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 6.2e-87 325.1 196 82.7
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.4e-86 323.9 358 56.1
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.5e-85 320.5 238 76.5
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 2.9e-84 316.2 209 70.8
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 3.8e-84 315.8 228 66.2
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 3.2e-83 312.8 218 69.7
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 9.3e-83 311.2 288 62.2
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.2e-82 310.8 328 56.4
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 4.6e-82 308.9 345 53.0
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 3.0e-81 306.2 417 49.2
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 3.0e-81 306.2 332 53.3
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 5.1e-81 305.4 194 78.4
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 8.7e-81 304.7 301 57.1
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 1.1e-80 304.3 320 54.4
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 1.5e-80 303.9 227 67.8
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 1.9e-80 303.5 196 71.4
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 2.5e-80 303.1 311 57.6
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 5.6e-80 302.0 354 53.7
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 1.6e-79 300.4 194 77.3
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 2.8e-79 299.7 213 71.4
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 4.8e-79 298.9 184 76.6
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 4.8e-79 298.9 336 50.0
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 6.2e-79 298.5 308 53.6
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 1.4e-78 297.4 215 69.8
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 5.3e-78 295.4 339 53.1
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 3.4e-77 292.7 211 66.4
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 4.5e-77 292.4 211 67.8
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 1.9e-75 287.0 214 68.7
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 4.2e-75 285.8 218 66.5
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 7.9e-74 281.6 228 60.1
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 1.0e-73 281.2 225 64.0
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 1.0e-73 281.2 293 55.6
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.3e-73 280.8 202 65.8
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 1.8e-73 280.4 228 64.5
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 1.1e-72 277.7 208 64.4
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.1e-66 256.9 266 54.1
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.1e-66 256.9 266 54.1
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 1.0e-65 254.6 308 46.8
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 9.0e-62 241.5 339 48.1
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 3.8e-60 236.1 183 65.6
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 6.5e-60 235.3 288 49.0
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 1.6e-55 220.7 172 63.4
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 3.1e-54 216.5 297 44.8
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 6.9e-54 215.3 167 61.7
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 7.9e-50 201.8 284 43.3
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 2.3e-49 200.3 225 49.3
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 3.0e-49 199.9 239 52.3
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 2.5e-48 196.8 294 46.6
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 8.2e-47 191.8 227 50.2
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 2.4e-46 190.3 190 52.6
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 1.9e-43 180.6 131 67.9
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 1.2e-42 177.9 302 42.1
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 4.7e-42 176.0 93 90.3
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.0e-36 158.3 87 86.2
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 1.4e-30 137.9 76 81.6
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 1.0e-25 121.7 233 34.3
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 5.2e-25 119.4 64 98.4
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 3.4e-24 116.7 67 85.1
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 8.5e-20 102.1 154 40.9
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 3.2e-19 100.1 175 36.0
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 3.6e-18 96.7 164 31.7
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.3e-12 77.4 49 81.6
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 1.9e-11 74.3 43 86.0
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 2.5e-11 73.9 77 48.1
ATR0138G010 Amborella trichopoda HOM05D006516 ORTHO05D008083 3.2e-06 57.0 35 82.9


User provided reference genes

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