Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p04570 Brassica napus HOM05D003379 ORTHO05D003862 7.5e-127 457.2 234 100.0
C07p23110 Brassica napus HOM05D003379 ORTHO05D003862 7.3e-98 360.9 203 92.6
C09p44800 Brassica napus HOM05D003379 ORTHO05D003862 2.1e-92 342.8 203 87.7
C09p11640 Brassica napus HOM05D003379 ORTHO05D003862 2.6e-87 325.9 183 91.8
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 1.3e-65 253.8 203 69.5
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 7.6e-63 244.6 202 66.3
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 1.3e-62 243.8 201 66.7
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 4.9e-62 241.9 199 66.3
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 9.6e-58 227.6 202 64.4
BolC1t05110H Brassica oleracea HOM05D003379 ORTHO05D003862 1.1e-56 224.2 123 92.7
BolC2t08454H Brassica oleracea HOM05D003379 ORTHO05D003862 5.3e-56 221.9 123 92.7
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 6.9e-56 221.5 199 63.8
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 1.3e-54 217.2 203 62.6
C01p51670 Brassica napus HOM05D003379 ORTHO05D003862 6.1e-52 208.4 123 88.6
C08p31050 Brassica napus HOM05D003379 ORTHO05D003862 1.5e-50 203.8 123 86.2
BolC9t57591H Brassica oleracea HOM05D013459 ORTHO05D018689 7.4e-50 201.4 176 66.5
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 3.1e-48 196.1 204 56.9
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 1.4e-43 180.6 205 53.2
C09p09610 Brassica napus HOM05D003379 ORTHO05D003862 1.1e-40 171.0 91 94.5
C08p33300 Brassica napus HOM05D003379 ORTHO05D003862 5.9e-39 165.2 109 78.0
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 3.6e-36 156.0 224 46.9
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 4.8e-33 145.6 231 42.9
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 1.8e-32 143.7 205 47.3
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 3.8e-30 136.0 204 43.6
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 4.2e-29 132.5 202 44.6
BolC9t53871H Brassica oleracea HOM05D003379 ORTHO05D003862 1.4e-27 127.5 124 62.1
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 4.0e-27 125.9 214 39.3
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 6.3e-25 118.6 229 36.7
BcaC09g48308 Brassica carinata HOM05D003379 ORTHO05D003862 5.0e-22 109.0 58 93.1
C09p60140 Brassica napus HOM05D003379 ORTHO05D003862 5.5e-21 105.5 56 91.1
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 1.7e-17 94.0 213 32.4
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 2.7e-15 86.7 222 32.9
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 1.0e-14 84.7 226 31.0
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 1.0e-14 84.7 219 30.1
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 1.7e-14 84.0 211 30.3
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 2.3e-14 83.6 248 29.0
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 2.9e-14 83.2 221 30.3
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.1e-13 81.3 205 29.8
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.9e-13 80.5 213 32.4
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.5e-13 80.1 216 31.0
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 4.2e-13 79.3 225 30.7
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 7.2e-13 78.6 229 29.3
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.2e-12 77.8 221 29.0
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 2.8e-12 76.6 228 28.9
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 2.8e-12 76.6 235 28.5
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 2.8e-12 76.6 222 30.2
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 4.7e-12 75.9 236 28.4
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 4.7e-12 75.9 232 28.9
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 6.1e-12 75.5 203 31.5
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.0e-11 74.7 203 32.0
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.4e-11 74.3 232 28.4
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 1.4e-11 74.3 213 28.6
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 2.3e-11 73.6 205 28.3
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 4.0e-11 72.8 242 30.2
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 5.2e-11 72.4 204 30.4
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 5.2e-11 72.4 203 31.0
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.5e-10 70.9 200 30.5
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 4.4e-10 69.3 227 26.0
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 5.7e-10 68.9 223 28.3
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 5.7e-10 68.9 224 29.0
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 9.8e-10 68.2 214 28.0
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.3e-09 67.8 221 28.5
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 1.7e-09 67.4 207 30.9
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 2.8e-09 66.6 229 29.3
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 2.8e-09 66.6 236 28.8
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 2.8e-09 66.6 201 33.3
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.1e-08 64.7 215 31.2
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.8e-08 63.9 204 27.9
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 4.1e-08 62.8 215 28.8
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 9.2e-08 61.6 213 28.2
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 1.6e-07 60.8 208 27.9
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 1.6e-07 60.8 235 26.0
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 2.0e-07 60.5 219 28.3
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 2.7e-07 60.1 236 28.0
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 4.5e-07 59.3 222 28.4
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 5.9e-07 58.9 236 28.4
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 7.8e-07 58.5 217 24.9
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 7.8e-07 58.5 231 26.0
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.3e-06 57.8 223 26.5
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.8e-06 56.2 194 28.9
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 5.0e-06 55.8 210 27.1
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 5.0e-06 55.8 186 25.3
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 8.6e-06 55.1 225 26.7


User provided reference genes

Program Settings