Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p02170 Brassica napus HOM05D005552 ORTHO05D006743 2.0e-66 255.8 139 100.0
BolC1t00209H Brassica oleracea HOM05D005552 ORTHO05D006743 2.0e-66 255.8 139 100.0
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 1.9e-37 159.5 115 69.6
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 4.3e-37 158.3 115 68.7
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 7.3e-37 157.5 115 67.8
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 9.5e-37 157.1 115 68.7
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 2.8e-36 155.6 115 69.6
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 3.6e-36 155.2 116 72.4
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 8.1e-36 154.1 115 66.1
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 1.4e-35 153.3 117 69.2
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 1.4e-35 153.3 115 71.3
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 1.4e-35 153.3 115 71.3
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 2.3e-35 152.5 116 70.7
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 2.3e-35 152.5 116 70.7
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 1.0e-30 137.1 115 60.9
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 4.3e-29 131.7 115 59.1
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 4.7e-28 128.3 115 53.0
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 1.1e-27 127.1 115 55.7
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.8e-27 126.3 115 56.5
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 1.8e-27 126.3 114 57.0
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 2.3e-27 125.9 115 52.2
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 4.0e-27 125.2 115 53.0
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 8.9e-27 124.0 134 52.2
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 1.2e-26 123.6 115 53.9
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 1.5e-26 123.2 125 48.8
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 2.0e-26 122.9 115 51.3
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 2.0e-26 122.9 115 52.2
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 2.6e-26 122.5 118 51.7
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 3.4e-26 122.1 115 52.2
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 5.8e-26 121.3 124 47.6
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 5.8e-26 121.3 124 47.6
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 5.8e-26 121.3 115 56.5
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 9.9e-26 120.6 115 52.2
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 9.9e-26 120.6 115 53.0
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 1.7e-25 119.8 115 50.4
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 1.7e-25 119.8 125 46.4
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 1.7e-25 119.8 112 51.8
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 1.7e-25 119.8 114 54.4
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 2.2e-25 119.4 113 55.8
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 3.7e-25 118.6 115 52.2
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 4.9e-25 118.2 115 49.6
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 6.4e-25 117.9 126 49.2
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 6.4e-25 117.9 115 52.2
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 6.4e-25 117.9 115 52.2
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 8.4e-25 117.5 112 49.1
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 8.4e-25 117.5 113 53.1
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 8.4e-25 117.5 115 55.7
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 1.1e-24 117.1 115 52.2
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 1.1e-24 117.1 118 51.7
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 2.4e-24 115.9 115 50.4
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 2.4e-24 115.9 115 51.3
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 2.4e-24 115.9 106 52.8
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 4.1e-24 115.2 115 50.4
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 4.1e-24 115.2 116 49.1
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.1e-24 115.2 115 49.6
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 4.1e-24 115.2 115 49.6
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 4.1e-24 115.2 115 49.6
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 5.4e-24 114.8 115 49.6
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 7.1e-24 114.4 115 49.6
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 9.2e-24 114.0 115 50.4
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 9.2e-24 114.0 115 51.3
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 2.1e-23 112.8 115 50.4
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 2.7e-23 112.5 115 53.0
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.7e-23 112.5 115 48.7
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 2.7e-23 112.5 115 49.6
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 3.5e-23 112.1 115 48.7
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 4.6e-23 111.7 115 52.2
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 4.6e-23 111.7 115 49.6
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 6.0e-23 111.3 115 50.4
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 7.8e-23 110.9 115 47.8
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 1.0e-22 110.5 115 52.2
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 1.7e-22 109.8 130 46.2
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 1.7e-22 109.8 122 48.4
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 2.3e-22 109.4 113 49.6
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 2.3e-22 109.4 113 51.3
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 3.0e-22 109.0 119 51.3
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 3.0e-22 109.0 115 47.0
unitig_26.g9473 Utricularia gibba HOM05D005552 ORTHO05D006743 3.0e-22 109.0 126 46.8
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 3.9e-22 108.6 113 50.4
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 5.1e-22 108.2 130 45.4
HanXRQChr04g0119841 Helianthus annuus HOM05D005552 ORTHO05D006743 6.6e-22 107.8 119 50.4
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 8.6e-22 107.5 115 49.6
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 1.9e-21 106.3 113 47.8
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 2.5e-21 105.9 128 45.3
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 2.5e-21 105.9 115 50.4
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 3.3e-21 105.5 97 54.6
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 3.3e-21 105.5 115 46.1
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 3.3e-21 105.5 116 47.4
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 7.3e-21 104.4 115 47.0
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 1.2e-20 103.6 115 46.1
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 1.6e-20 103.2 117 44.4
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 2.8e-20 102.4 97 53.6
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 3.6e-20 102.1 115 45.2
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 6.2e-20 101.3 113 48.7
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 1.4e-19 100.1 130 45.4
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 1.4e-19 100.1 116 44.0
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 1.4e-19 100.1 116 44.8
SHI23011 Sapria himalayana HOM05D005552 ORTHO05D006743 3.1e-19 99.0 99 46.5
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 1.5e-18 96.7 114 43.0
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 9.9e-18 94.0 130 43.8
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 1.3e-17 93.6 113 45.1
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.1e-16 90.5 115 41.7
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 4.2e-16 88.6 115 41.7
TAR376G0458 Trochodendron aralioides HOM05D005552 ORTHO05D006743 2.1e-15 86.3 73 58.9
Atru.chr3.423 Acer truncatum HOM05D005552 ORTHO05D006743 9.6e-13 77.4 69 52.2
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.8e-12 75.9 80 46.2
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 8.1e-12 74.3 98 40.8
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 1.5e-10 70.1 117 36.8
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 1.9e-08 63.2 96 38.5


User provided reference genes

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