Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 2.5e-258 895.2 548 100.0
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 2.5e-250 868.6 489 97.5
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 6.7e-243 844.0 550 96.0
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 1.1e-242 843.2 480 96.9
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 1.7e-222 776.2 456 94.5
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.9e-221 772.7 479 89.8
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 8.5e-214 747.3 480 87.9
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 5.1e-211 738.0 481 86.9
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 5.7e-210 734.6 494 82.6
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 5.0e-206 721.5 481 85.2
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 9.7e-202 707.2 482 83.8
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.3e-201 706.8 480 83.5
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 9.8e-186 654.1 482 77.4
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 1.8e-179 633.3 483 74.1
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 6.8e-179 631.3 480 75.8
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 3.2e-176 622.5 520 69.6
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.4e-176 621.7 483 73.7
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 8.6e-174 614.4 510 69.8
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 4.3e-173 612.1 483 72.0
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 8.0e-172 607.8 486 72.4
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 2.3e-171 606.3 485 71.1
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.1e-171 605.9 496 72.4
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 3.1e-171 605.9 485 72.0
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 5.2e-171 605.1 486 73.3
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.9e-171 604.4 496 72.2
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 1.2e-170 604.0 486 72.0
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 3.4e-170 602.4 485 71.8
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 2.9e-169 599.4 484 71.3
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 1.9e-168 596.7 486 71.2
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 3.2e-168 595.9 519 68.8
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 7.8e-167 591.3 483 71.0
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.3e-166 590.5 498 70.5
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 5.0e-166 588.6 487 70.6
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 8.6e-166 587.8 483 70.4
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 1.2e-164 583.9 485 71.5
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 4.7e-164 582.0 489 69.7
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 2.6e-162 576.2 485 69.7
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 4.4e-162 575.5 487 70.6
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 5.8e-162 575.1 484 70.0
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 9.8e-162 574.3 484 69.6
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 4.9e-161 572.0 487 71.5
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 1.1e-160 570.9 509 67.4
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 1.1e-160 570.9 485 68.0
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 4.1e-160 568.9 451 71.4
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 9.2e-160 567.8 479 68.3
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.0e-158 564.3 482 68.7
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 1.3e-158 563.9 486 69.1
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.3e-158 563.1 490 68.6
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 5.1e-158 562.0 450 70.9
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 1.9e-157 560.1 486 68.9
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 5.6e-157 558.5 448 72.1
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 5.6e-157 558.5 487 69.0
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.8e-156 556.2 480 67.1
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 8.1e-156 554.7 486 68.1
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 1.1e-155 554.3 483 67.9
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 1.2e-154 550.8 451 70.1
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 3.4e-154 549.3 451 69.6
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 4.4e-154 548.9 488 68.4
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.4e-152 543.9 484 67.8
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 1.9e-152 543.5 483 68.5
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 1.9e-152 543.5 503 64.0
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 3.2e-152 542.7 486 67.3
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 4.1e-152 542.3 481 67.8
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 6.0e-151 538.5 455 69.7
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 7.8e-151 538.1 452 71.0
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 7.8e-151 538.1 487 67.8
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 3.9e-150 535.8 481 68.0
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 1.1e-149 534.3 499 65.3
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 3.6e-148 529.3 519 63.2
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 1.1e-147 527.7 482 65.8
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 8.9e-147 524.6 449 67.9
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.2e-145 520.0 496 63.3
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.1e-144 517.7 449 67.7
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.1e-143 513.5 485 64.9
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.7e-142 510.4 445 68.5
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 3.6e-140 502.7 451 66.7
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 9.0e-139 498.0 451 66.7
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 9.0e-139 498.0 373 73.7
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.1e-136 491.1 510 59.2
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.1e-135 486.9 465 62.2
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.3e-134 484.2 487 62.0
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 7.3e-133 478.4 376 72.3
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 8.1e-132 474.9 373 69.7
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 6.9e-131 471.9 489 60.9
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.2e-129 466.8 386 70.7
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 3.5e-127 459.5 485 58.6
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 2.1e-124 450.3 375 67.5
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.4e-121 438.3 389 68.1
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 2.3e-118 430.3 521 56.0
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.6e-108 397.5 475 53.5
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 6.9e-107 392.1 488 52.9
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 1.0e-105 388.3 385 63.6
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 2.9e-105 386.7 341 71.6
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 8.2e-100 368.6 335 67.8
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.3e-97 361.3 469 50.7
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 2.9e-97 360.1 345 66.1
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 1.9e-96 357.5 375 60.0
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 9.4e-96 355.1 347 65.7
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 3.3e-93 346.7 308 70.5
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 4.1e-91 339.7 452 54.6
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 1.3e-89 334.7 523 47.6
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 8.8e-86 322.0 273 70.3
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 1.1e-83 315.1 309 64.7
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 3.1e-83 313.5 377 59.4
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 8.5e-81 305.4 524 45.0
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 6.3e-76 289.3 346 58.4
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 2.3e-65 254.2 239 65.3
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 2.5e-64 250.8 233 66.1
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 1.2e-63 248.4 233 65.7
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 6.1e-63 246.1 273 58.2
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 2.3e-62 244.2 332 53.9
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.5e-61 241.5 318 55.3
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 1.2e-58 231.9 247 53.4
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 3.0e-57 227.3 465 44.1
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 1.2e-55 221.9 128 83.6
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 2.8e-55 220.7 128 83.6
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 3.6e-55 220.3 149 72.5
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 3.9e-49 200.3 128 78.9
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.5e-40 171.8 352 39.8
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.8e-36 157.1 88 84.1
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 2.1e-34 151.4 477 30.6
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 4.7e-31 140.2 162 51.9
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 8.1e-31 139.4 114 73.7
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.2e-29 135.6 114 73.7
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 4.4e-29 133.7 114 66.7
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 8.7e-25 119.4 145 49.0
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 2.0e-21 108.2 66 78.8
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.3e-20 105.5 72 72.2
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.2e-19 100.9 66 75.8
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 5.1e-17 93.6 83 62.7
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.7e-17 92.8 64 76.6
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 1.1e-16 92.4 82 59.8
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 4.3e-16 90.5 77 75.3
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.6e-13 81.3 380 27.9
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 7.6e-13 79.7 293 31.4
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.2e-12 78.2 80 62.5
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.2e-10 72.4 50 68.0


User provided reference genes

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