Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 1.3e-60 236.1 113 100.0
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 1.3e-60 236.1 113 100.0
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.1e-58 228.8 113 97.3
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 3.9e-57 224.6 113 95.6
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.0e-53 212.2 113 91.2
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 3.5e-53 211.5 113 91.2
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 4.5e-53 211.1 113 91.2
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 7.7e-53 210.3 113 91.2
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.3e-52 209.5 113 90.3
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.2e-52 208.8 113 90.3
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 5.0e-52 207.6 113 89.4
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 7.2e-51 203.8 113 86.7
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 9.4e-51 203.4 113 87.6
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 2.7e-50 201.8 113 86.7
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 4.7e-50 201.1 113 86.7
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.3e-41 172.2 113 76.1
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.0e-41 171.4 113 74.3
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 5.2e-41 171.0 113 74.3
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 2.2e-39 165.6 113 71.7
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 8.3e-39 163.7 113 70.8
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.1e-38 163.3 113 69.9
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.8e-38 162.5 114 69.3
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.1e-38 161.8 114 68.4
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 3.1e-38 161.8 111 70.3
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.1e-38 161.8 111 70.3
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 5.4e-38 161.0 113 70.8
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 7.0e-38 160.6 111 70.3
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.2e-37 159.8 111 70.3
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.6e-37 159.5 114 69.3
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 2.0e-37 159.1 111 69.4
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 2.7e-37 158.7 114 68.4
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.7e-37 158.7 111 68.5
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 2.7e-37 158.7 113 69.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 3.5e-37 158.3 114 69.3
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 5.9e-37 157.5 114 68.4
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 7.7e-37 157.1 113 69.0
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 7.7e-37 157.1 112 67.0
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.0e-36 156.8 114 66.7
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.3e-36 156.4 114 68.4
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.3e-36 156.4 114 68.4
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.3e-36 156.4 113 68.1
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 1.3e-36 156.4 114 67.5
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.7e-36 156.0 114 67.5
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 1.7e-36 156.0 113 66.4
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.7e-36 156.0 115 68.7
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.7e-36 156.0 114 68.4
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 2.2e-36 155.6 122 64.8
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 2.9e-36 155.2 115 66.1
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 3.8e-36 154.8 116 66.4
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 3.8e-36 154.8 111 67.6
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 3.8e-36 154.8 113 70.8
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 3.8e-36 154.8 114 66.7
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 3.8e-36 154.8 114 69.3
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 5.0e-36 154.5 113 69.0
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 5.0e-36 154.5 115 67.8
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 6.5e-36 154.1 114 68.4
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 6.5e-36 154.1 113 67.3
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.5e-35 152.1 112 66.1
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 2.5e-35 152.1 94 75.5
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 2.5e-35 152.1 115 66.1
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.5e-35 152.1 115 66.1
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 3.2e-35 151.8 115 64.3
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 5.5e-35 151.0 114 64.0
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 5.5e-35 151.0 116 64.7
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 5.5e-35 151.0 116 65.5
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 7.2e-35 150.6 113 66.4
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 7.2e-35 150.6 113 69.0
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 7.2e-35 150.6 113 68.1
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 7.2e-35 150.6 113 67.3
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 9.5e-35 150.2 115 62.6
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 9.5e-35 150.2 113 71.7
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.2e-34 149.8 112 63.4
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 2.8e-34 148.7 116 64.7
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 3.6e-34 148.3 113 64.6
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 3.6e-34 148.3 113 68.1
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 4.7e-34 147.9 114 63.2
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 8.0e-34 147.1 113 62.8
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.4e-33 146.4 113 66.4
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 1.4e-33 146.4 105 65.7
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.8e-33 146.0 116 63.8
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 2.3e-33 145.6 115 64.3
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.3e-33 145.6 114 65.8
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 2.3e-33 145.6 114 65.8
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 4.0e-33 144.8 114 62.3
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.5e-32 142.9 78 82.1
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 3.4e-32 141.7 114 60.5
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 4.4e-32 141.4 77 80.5
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.3e-31 139.8 78 79.5
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.3e-31 139.8 122 58.2
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.7e-31 139.4 121 56.2
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 2.2e-31 139.0 113 62.8
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.8e-31 138.7 111 62.2
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.8e-31 138.7 81 74.1
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.1e-30 136.7 112 59.8
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.8e-30 136.0 112 60.7
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 4.1e-30 134.8 112 60.7
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 9.2e-30 133.7 113 58.4
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 3.5e-29 131.7 66 87.9
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 3.5e-29 131.7 105 62.9
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.0e-28 130.2 66 86.4
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 2.3e-28 129.0 168 45.2
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.9e-27 125.9 65 89.2
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 7.3e-27 124.0 101 62.4
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.2e-26 123.2 64 84.4
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 4.7e-26 121.3 74 70.3
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.3e-25 119.0 72 70.8
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 6.8e-25 117.5 77 71.4
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.5e-24 116.3 73 74.0
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 4.4e-24 114.8 62 83.9
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 5.7e-24 114.4 122 51.6
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 2.9e-23 112.1 67 79.1
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.1e-22 110.2 102 56.9
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.3e-15 86.7 79 55.7
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.1e-14 83.6 74 59.5
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 5.4e-14 81.3 76 55.3
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.5e-11 73.2 76 53.9
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.5e-11 73.2 72 55.6
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 4.3e-11 71.6 77 49.4
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 6.8e-09 64.3 35 77.1


User provided reference genes

Program Settings