Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC28t60435H Brassica oleracea HOM05D008793 ORTHO05D012151 5.6e-25 116.7 55 100.0
BraSC77t46659Z Brassica rapa HOM05D008793 ORTHO05D012151 5.6e-25 116.7 55 100.0
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 1.6e-19 98.6 45 100.0
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 1.6e-19 98.6 45 100.0
C01p35010 Brassica napus HOM05D008793 ORTHO05D014415 2.4e-15 84.7 71 62.0
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 4.5e-14 80.5 45 91.1
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-14 80.5 53 79.2
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 1.3e-13 79.0 45 88.9
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 6.5e-13 76.6 45 86.7
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 6.5e-13 76.6 45 86.7
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 6.5e-13 76.6 45 86.7
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 6.5e-13 76.6 45 86.7
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 6.5e-13 76.6 45 86.7
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 6.5e-13 76.6 45 86.7
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 1.9e-12 75.1 45 84.4
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 5.5e-12 73.6 45 84.4
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 5.5e-12 73.6 45 84.4
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 1.6e-11 72.0 46 84.8
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.1e-11 71.6 45 82.2
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 2.1e-11 71.6 45 82.2
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 4.6e-11 70.5 45 80.0
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 2.3e-10 68.2 45 77.8
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 2.3e-10 68.2 45 77.8
CDE02G0896 Ceratophyllum demersum HOM05D008793 ORTHO05D012151 5.1e-10 67.0 45 77.8
arahy.Tifrunner.gnm1.ann1.WM32N3 Arachis hypogaea HOM05D009805 ORTHO05D010994 5.7e-09 63.5 69 52.2
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 1.3e-08 62.4 45 73.3
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 8.2e-08 59.7 40 80.0
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 1.8e-07 58.5 39 76.9
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 5.3e-07 57.0 61 55.7
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 5.3e-07 57.0 61 55.7
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 5.3e-07 57.0 38 76.3


User provided reference genes

Program Settings