Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 2.3e-53 211.8 100 100.0
BolSC28t60328H Brassica oleracea HOM05D005210 ORTHO05D011782 2.3e-53 211.8 100 100.0
BolSC28t60432H Brassica oleracea HOM05D005210 ORTHO05D011782 2.3e-53 211.8 100 100.0
BraSC48t46282Z Brassica rapa HOM05D005210 ORTHO05D011782 2.3e-53 211.8 100 100.0
BraSC77t46635Z Brassica rapa HOM05D005210 ORTHO05D011782 2.3e-53 211.8 100 100.0
BraSC77t46662Z Brassica rapa HOM05D005210 ORTHO05D011782 2.3e-53 211.8 100 100.0
Nitab4.5_0010951g0010 Nicotiana tabacum HOM05D005210 ORTHO05D011782 2.3e-48 195.3 100 93.0
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 4.3e-47 191.0 100 90.0
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 4.3e-47 191.0 100 90.0
arahy.Tifrunner.gnm1.ann1.VJ3LFE Arachis hypogaea HOM05D005210 ORTHO05D011782 4.3e-47 191.0 100 90.0
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 8.1e-46 186.8 100 89.0
ATMG00516 Arabidopsis thaliana HOM05D005210 ORTHO05D011782 4.4e-44 181.0 86 100.0
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 2.4e-42 175.3 93 90.3
arahy.Tifrunner.gnm1.ann1.K50RJN Arachis hypogaea HOM05D005210 ORTHO05D011782 1.2e-41 172.9 99 82.8
TPR.G161 Trifolium pratense HOM05D005210 ORTHO05D011782 9.9e-36 153.3 79 92.4
Nitab4.5_0005831g0040 Nicotiana tabacum HOM05D005210 ORTHO05D011782 1.7e-35 152.5 92 83.7
Nitab4.5_0029129g0030 Nicotiana tabacum HOM05D005210 ORTHO05D011782 1.1e-34 149.8 87 83.9
Sc17g0003720 Simmondsia chinensis HOM05D005210 ORTHO05D011782 1.4e-34 149.4 88 81.8
Nitab4.5_0024895g0010 Nicotiana tabacum HOM05D005210 ORTHO05D011782 2.7e-33 145.2 87 81.6
EL10Ac6g14329 Beta vulgaris HOM05D005210 ORTHO05D011782 1.0e-32 143.3 77 89.6
Gohir.A03G133705 Gossypium hirsutum HOM05D005210 ORTHO05D011782 2.7e-25 118.6 63 93.7
Nitab4.5_0000145g0220 Nicotiana tabacum HOM05D005210 ORTHO05D011782 2.8e-22 108.6 62 82.3
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 5.8e-20 100.9 46 93.5
SHI36144 Sapria himalayana HOM05D008793 ORTHO05D011782 4.2e-18 94.7 46 89.1
Nitab4.5_0004300g0100 Nicotiana tabacum HOM05D005210 ORTHO05D011782 2.5e-15 85.5 66 71.2
AUR62017274 Chenopodium quinoa HOM05D008580 ORTHO05D010833 2.5e-07 58.9 30 93.3
Nn1g09976 Nelumbo nucifera HOM05D005210 ORTHO05D011782 7.4e-07 57.4 31 90.3
Nn1g10042 Nelumbo nucifera HOM05D005210 ORTHO05D011782 7.4e-07 57.4 31 90.3
Nn4g26005 Nelumbo nucifera HOM05D005210 ORTHO05D011782 7.4e-07 57.4 31 90.3
BraSC224t45814Z Brassica rapa HOM05D002965 ORTHO05D011782 2.8e-06 55.5 45 64.4
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 6.2e-06 54.3 79 46.8
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 6.2e-06 54.3 79 46.8
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 6.2e-06 54.3 79 46.8
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 6.2e-06 54.3 79 46.8


User provided reference genes

Program Settings