Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraSC39t46207Z Brassica rapa HOM05D008327 ORTHO05D010589 2.4e-63 245.4 125 100.0
BNapus_Darmor_BZH_scaffold_51p00150 Brassica napus HOM05D008327 ORTHO05D010589 8.5e-61 236.9 120 100.0
BNapus_Darmor_BZH_scaffold_51p00160 Brassica napus HOM05D008327 ORTHO05D010589 8.5e-61 236.9 120 100.0
BraSC26t45941Z Brassica rapa HOM05D008327 ORTHO05D010589 8.5e-61 236.9 120 100.0
BraSC26t45943Z Brassica rapa HOM05D008327 ORTHO05D010589 8.5e-61 236.9 120 100.0
A08p07840 Brassica napus HOM05D008327 ORTHO05D010589 1.1e-60 236.5 120 99.2
A06p24180 Brassica napus HOM05D008327 ORTHO05D010589 2.5e-60 235.3 120 99.2
BNapus_Darmor_BZH_scaffold_51p00070 Brassica napus HOM05D008327 ORTHO05D010589 2.5e-60 235.3 119 100.0
A08p07830 Brassica napus HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BNapus_Darmor_BZH_scaffold_242p00010 Brassica napus HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BNapus_Darmor_BZH_scaffold_51p00090 Brassica napus HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BNapus_Darmor_BZH_scaffold_75p00010 Brassica napus HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BNapus_Darmor_BZH_scaffold_75p00030 Brassica napus HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BraA06t25451Z Brassica rapa HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BraA06t25452Z Brassica rapa HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BraA06t25455Z Brassica rapa HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BraSC194t45805Z Brassica rapa HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BraSC26t45940Z Brassica rapa HOM05D008327 ORTHO05D010589 4.2e-60 234.6 120 99.2
BNapus_Darmor_BZH_scaffold_70p00010 Brassica napus HOM05D008327 ORTHO05D010589 7.2e-60 233.8 120 99.2
A05p23660 Brassica napus HOM05D008327 ORTHO05D010589 9.4e-60 233.4 120 99.2
A06p24590 Brassica napus HOM05D008327 ORTHO05D010589 1.6e-59 232.6 120 97.5
BNapus_Darmor_BZH_scaffold_75p00040 Brassica napus HOM05D008327 ORTHO05D010589 1.6e-59 232.6 120 98.3
BNapus_Darmor_BZH_scaffold_70p00020 Brassica napus HOM05D008327 ORTHO05D010589 2.1e-59 232.3 120 98.3
A01p27120 Brassica napus HOM05D008327 ORTHO05D010589 3.6e-59 231.5 120 98.3
BraA08t32809Z Brassica rapa HOM05D008327 ORTHO05D010589 3.6e-59 231.5 120 97.5
BraSC26t45938Z Brassica rapa HOM05D008327 ORTHO05D010589 1.8e-58 229.2 126 94.4
A08p07820 Brassica napus HOM05D008327 ORTHO05D010589 3.3e-57 224.9 120 97.5
BraSC25t45923Z Brassica rapa HOM05D008327 ORTHO05D010589 1.7e-56 222.6 121 95.0
BNapus_Darmor_BZH_scaffold_242p00020 Brassica napus HOM05D008327 ORTHO05D010589 2.4e-55 218.8 111 99.1
A07p07150 Brassica napus HOM05D008327 ORTHO05D010589 5.0e-53 211.1 107 100.0
BNapus_Darmor_BZH_scaffold_51p00110 Brassica napus HOM05D008327 ORTHO05D010589 5.0e-53 211.1 107 100.0
BNapus_Darmor_BZH_scaffold_51p00130 Brassica napus HOM05D008327 ORTHO05D010589 5.0e-53 211.1 107 100.0
BraSC26t45939Z Brassica rapa HOM05D008327 ORTHO05D010589 9.4e-44 180.3 89 98.9
A10p21760 Brassica napus HOM05D008327 ORTHO05D010589 3.4e-41 171.8 84 100.0
BraA02t07579Z Brassica rapa HOM05D008327 ORTHO05D010589 1.1e-36 156.8 128 68.8
BolC2t10144H Brassica oleracea HOM05D008327 ORTHO05D010589 1.2e-35 153.3 129 67.4
A03p68530 Brassica napus HOM05D008327 ORTHO05D010589 2.2e-32 142.5 72 100.0
BNapus_Darmor_BZH_scaffold_51p00060 Brassica napus HOM05D008327 ORTHO05D010589 8.3e-32 140.6 71 100.0
A08p07870 Brassica napus HOM05D008327 ORTHO05D010589 5.4e-31 137.9 71 98.6
BraA08t32807Z Brassica rapa HOM05D008327 ORTHO05D010589 1.0e-29 133.7 67 100.0
BNapus_Darmor_BZH_scaffold_51p00030 Brassica napus HOM05D008327 ORTHO05D010589 2.3e-26 122.5 62 100.0
BNapus_Darmor_BZH_scaffold_70p00030 Brassica napus HOM05D008327 ORTHO05D033497 3.3e-20 102.1 86 70.9
BraSC33t45966Z Brassica rapa HOM05D008327 ORTHO05D010589 1.3e-16 90.1 89 56.2
BraSC194t45804Z Brassica rapa HOM05D008327 ORTHO05D010589 2.9e-16 89.0 48 95.8
Sp7g08340 Schrenkiella parvula HOM05D008327 ORTHO05D010589 6.8e-10 67.8 124 39.5
Sp3g26110 Schrenkiella parvula HOM05D008327 ORTHO05D000563 8.9e-10 67.4 125 41.6
BraA06t25454Z Brassica rapa HOM05D008327 ORTHO05D010589 1.7e-08 63.2 30 96.7
Sp6g11770 Schrenkiella parvula HOM05D008327 ORTHO05D010589 1.7e-08 63.2 127 41.7
Sp7g09650 Schrenkiella parvula HOM05D011239 ORTHO05D000563 1.9e-07 59.7 115 39.1
A06p23960 Brassica napus HOM05D008327 ORTHO05D010589 5.4e-07 58.2 54 63.0
Sp4g08030 Schrenkiella parvula HOM05D011239 ORTHO05D010589 5.4e-07 58.2 118 39.8
Sp3g24850 Schrenkiella parvula HOM05D008327 ORTHO05D010589 1.6e-06 56.6 107 40.2
SpUn1035_0010 Schrenkiella parvula HOM05D008327 ORTHO05D010589 1.6e-06 56.6 43 62.8
Sp5g19430 Schrenkiella parvula HOM05D008327 ORTHO05D010589 2.7e-06 55.8 120 35.8


User provided reference genes

Program Settings