Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p68870 Brassica napus HOM05D004640 ORTHO05D005489 1.1e-62 243.0 118 100.0
BraSC39t46178Z Brassica rapa HOM05D004640 ORTHO05D005489 1.1e-62 243.0 118 100.0
BcaC02g10600 Brassica carinata HOM05D004640 ORTHO05D005489 2.1e-40 169.1 90 92.2
C04p25650 Brassica napus HOM05D004640 ORTHO05D005489 2.1e-40 169.1 90 92.2
C05p50900 Brassica napus HOM05D004640 ORTHO05D005489 2.1e-40 169.1 90 92.2
BolC4t24244H Brassica oleracea HOM05D004640 ORTHO05D005489 2.1e-40 169.1 90 92.2
BcaC06g31828 Brassica carinata HOM05D004640 ORTHO05D005489 2.1e-37 159.1 91 85.7
Carub.0002s0421 Capsella rubella HOM05D004640 ORTHO05D005489 2.8e-37 158.7 91 86.8
Thhalv10023347m.g Eutrema salsugineum HOM05D004640 ORTHO05D005489 4.7e-37 157.9 91 86.8
BcaB04g20302 Brassica carinata HOM05D004640 ORTHO05D005489 6.2e-37 157.5 91 85.7
A01p29810 Brassica napus HOM05D004640 ORTHO05D005489 6.2e-37 157.5 91 84.6
BraA01t03109Z Brassica rapa HOM05D004640 ORTHO05D005489 6.2e-37 157.5 91 84.6
BcaC09g49343 Brassica carinata HOM05D004640 ORTHO05D005489 4.0e-36 154.8 91 82.4
C01p37670 Brassica napus HOM05D004640 ORTHO05D005489 5.2e-36 154.5 90 83.3
BolC1t03731H Brassica oleracea HOM05D004640 ORTHO05D005489 5.2e-36 154.5 90 83.3
AT1G60995 Arabidopsis thaliana HOM05D004640 ORTHO05D005489 6.8e-36 154.1 91 84.6
Sp2g03520 Schrenkiella parvula HOM05D004640 ORTHO05D005489 6.8e-36 154.1 91 84.6
AL2G15460 Arabidopsis lyrata HOM05D004640 ORTHO05D005489 1.2e-35 153.3 91 83.5
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 7.6e-35 150.6 91 79.1
THA.LOC104809619 Tarenaya hassleriana HOM05D004640 ORTHO05D005489 2.3e-31 139.0 90 71.1
BNapus_Darmor_BZH_scaffold_271p00030 Brassica napus HOM05D004640 ORTHO05D005489 8.7e-23 110.5 62 85.5
Ca_00068_v3 Cicer arietinum L. HOM05D004640 ORTHO05D005489 3.3e-22 108.6 91 53.8
TPR.G2079 Trifolium pratense HOM05D004640 ORTHO05D005489 1.6e-21 106.3 91 52.7
Psat1g221200 Pisum sativum HOM05D004640 ORTHO05D005489 2.8e-21 105.5 91 52.7
Ciclev10000505m.g Citrus clementina HOM05D004640 ORTHO05D005489 3.6e-21 105.1 91 53.8
Glyma.08G187100 Glycine max HOM05D004640 ORTHO05D005489 6.2e-21 104.4 91 51.6
Glyma.15G045900 Glycine max HOM05D004640 ORTHO05D005489 6.2e-21 104.4 91 51.6
Thecc.02G088200 Theobroma cacao HOM05D004640 ORTHO05D005489 6.2e-21 104.4 91 52.7
CiPaw.05G048700 Carya illinoinensis HOM05D004640 ORTHO05D005489 1.1e-20 103.6 90 51.1
Manes.10G125900 Manihot esculenta HOM05D004640 ORTHO05D005489 1.4e-20 103.2 91 49.5
Lj6g0021650 Lotus japonicus HOM05D004640 ORTHO05D005489 1.8e-20 102.8 92 47.8
TWI59G0201 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 1.8e-20 102.8 90 51.1
TWI14G1252 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 2.4e-20 102.4 90 51.1
TWI23G1121 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 2.4e-20 102.4 90 51.1
Potri.001G211700 Populus trichocarpa HOM05D004640 ORTHO05D005489 3.1e-20 102.1 107 46.7
Sabra01G0163500 Salix brachista HOM05D004640 ORTHO05D005489 5.3e-20 101.3 108 45.4
GSVIVG01022882001 Vitis vinifera HOM05D004640 ORTHO05D005489 5.3e-20 101.3 91 49.5
Phvul.006G215300 Phaseolus vulgaris HOM05D004640 ORTHO05D005489 9.0e-20 100.5 91 49.5
Atru.chr6.619 Acer truncatum HOM05D004640 ORTHO05D005489 1.5e-19 99.8 88 51.1
Atru.chr6.621_Atru.chr6.622 Acer truncatum HOM05D004640 ORTHO05D005489 1.5e-19 99.8 88 51.1
Medtr2g006880 Medicago truncatula HOM05D004640 ORTHO05D005489 1.5e-19 99.8 91 48.4
VMungo0540G1095 Vigna mungo HOM05D004640 ORTHO05D005489 2.0e-19 99.4 88 50.0
Gorai.012G151900 Gossypium raimondii HOM05D004640 ORTHO05D005489 4.5e-19 98.2 91 50.5
Gohir.A04G121200 Gossypium hirsutum HOM05D004640 ORTHO05D005489 7.6e-19 97.4 91 49.5
COL.COLO4_11782 Corchorus olitorius HOM05D004640 ORTHO05D005489 9.9e-19 97.1 91 48.4
Lalb_Chr20g0123511 Lupinus albus HOM05D004640 ORTHO05D005489 9.9e-19 97.1 89 44.9
Duzib132G0532 Durio zibethinus HOM05D004640 ORTHO05D005489 2.2e-18 95.9 91 46.2
Gorai.002G006000 Gossypium raimondii HOM05D004640 ORTHO05D005489 6.4e-18 94.4 91 47.3
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea HOM05D004640 ORTHO05D005489 2.4e-17 92.4 86 48.8
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea HOM05D004640 ORTHO05D005489 2.4e-17 92.4 86 48.8
TAR381G0517 Trochodendron aralioides HOM05D004640 ORTHO05D005489 3.2e-17 92.0 91 41.8
AUR62006957 Chenopodium quinoa HOM05D004640 ORTHO05D005489 5.4e-17 91.3 91 45.1
CANSAT11G0894 Cannabis sativa HOM05D004640 ORTHO05D005489 7.1e-17 90.9 90 48.9
AUR62000605 Chenopodium quinoa HOM05D004640 ORTHO05D005489 9.3e-17 90.5 91 46.2
FAN13G0955 Fragaria x ananassa HOM05D004640 ORTHO05D005489 9.3e-17 90.5 88 48.9
Eucgr.I02737 Eucalyptus grandis HOM05D004640 ORTHO05D005489 1.2e-16 90.1 90 46.7
PGR142G2697 Punica granatum HOM05D004640 ORTHO05D005489 1.6e-16 89.7 89 49.4
FvH4_5g29191 Fragaria vesca HOM05D004640 ORTHO05D005489 2.7e-16 89.0 88 48.9
FAN04G1948 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.7e-16 89.0 88 48.9
FAN08G0534 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.7e-16 89.0 88 48.9
FAN18G0226 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.7e-16 89.0 88 48.9
RcHm_v2.0_Chr1g0332251 Rosa chinensis HOM05D004640 ORTHO05D005489 2.7e-16 89.0 88 51.1
QL02p099200 Quercus lobata HOM05D004640 ORTHO05D005489 4.6e-16 88.2 94 44.7
CsaV3_3G019120 Cucumis sativus L. HOM05D004640 ORTHO05D005489 6.0e-16 87.8 114 41.2
Nn7g37934 Nelumbo nucifera HOM05D004640 ORTHO05D005489 6.0e-16 87.8 91 45.1
MELO3C019462.2 Cucumis melo HOM05D004640 ORTHO05D005489 7.9e-16 87.4 113 41.6
ClCG05G009610 Citrullus lanatus HOM05D004640 ORTHO05D005489 1.0e-15 87.0 114 40.4
CSS0010715 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 1.3e-15 86.7 91 48.4
CSS0031954 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 1.3e-15 86.7 91 48.4
Dinv24776 Davidia involucrata HOM05D004640 ORTHO05D005489 1.8e-15 86.3 91 47.3
Rhsim05G0203300 Rhododendron simsii HOM05D004640 ORTHO05D005489 1.8e-15 86.3 91 46.2
SGA_v2.0_scaffold51G18853 Striga asiatica HOM05D004640 ORTHO05D005489 1.8e-15 86.3 115 41.7
Actinidia19942 Actinidia chinensis HOM05D004640 ORTHO05D005489 2.3e-15 85.9 91 48.4
Gohir.A01G005001 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.3e-15 85.9 81 46.9
Gohir.D01G005100 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.3e-15 85.9 81 46.9
Nitab4.5_0004809g0070 Nicotiana tabacum HOM05D004640 ORTHO05D005489 3.0e-15 85.5 108 38.9
Sed0025782 Sechium edule HOM05D004640 ORTHO05D005489 3.0e-15 85.5 113 41.6
Nitab4.5_0001785g0050 Nicotiana tabacum HOM05D004640 ORTHO05D005489 3.9e-15 85.1 108 38.9
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla HOM05D004640 ORTHO05D005489 6.7e-15 84.3 90 47.8
EL10Ac4g09724 Beta vulgaris HOM05D004640 ORTHO05D005489 1.9e-14 82.8 114 37.7
Cc09_g07620 Coffea canephora HOM05D004640 ORTHO05D005489 2.5e-14 82.4 91 45.1
ECA233G0813 Erigeron canadensis HOM05D004640 ORTHO05D005489 2.5e-14 82.4 89 46.1
Hund21765 Selenicereus undatus HOM05D004640 ORTHO05D005489 2.5e-14 82.4 91 41.8
Sopen04g014430 Solanum pennellii HOM05D004640 ORTHO05D005489 3.3e-14 82.0 108 38.0
Solyc04g026280.2 Solanum lycopersicum HOM05D004640 ORTHO05D005489 5.6e-14 81.3 108 38.0
Migut.H02548 Erythranthe guttata HOM05D004640 ORTHO05D005489 7.4e-14 80.9 79 49.4
Aqoxy1G01535 Aquilegia oxysepala HOM05D004640 ORTHO05D005489 1.6e-13 79.7 88 40.9
DCAR_021303 Daucus carota HOM05D004640 ORTHO05D005489 1.6e-13 79.7 106 38.7
Peaxi162Scf00577g00411 Petunia axillaris HOM05D004640 ORTHO05D005489 1.6e-13 79.7 90 42.2
Sc09g0001940 Simmondsia chinensis HOM05D004640 ORTHO05D005489 3.7e-13 78.6 89 41.6
Lj4C822G11 Lonicera japonica HOM05D004640 ORTHO05D005489 4.8e-13 78.2 91 45.1
MD08G1235100 Malus domestica HOM05D004640 ORTHO05D005489 6.2e-13 77.8 91 45.1
MSTRG.23232 Avicennia marina HOM05D004640 ORTHO05D005489 8.1e-13 77.4 88 46.6
Lsat_1_v5_gn_5_71601 Lactuca sativa HOM05D004640 ORTHO05D005489 8.1e-13 77.4 89 44.9
Prupe.1G004500 Prunus persica HOM05D004640 ORTHO05D005489 4.0e-12 75.1 91 45.1
HanXRQChr15g0469061 Helianthus annuus HOM05D004640 ORTHO05D005489 6.9e-12 74.3 79 48.1
MD15G1426300 Malus domestica HOM05D004640 ORTHO05D005489 2.0e-11 72.8 91 44.0
vmacro12737 Vaccinium macrocarpon HOM05D004640 ORTHO05D005489 4.5e-11 71.6 78 47.4
Actinidia36578 Actinidia chinensis HOM05D004640 ORTHO05D005489 7.6e-11 70.9 60 55.0
PSO675G0104 Papaver somniferum HOM05D004640 ORTHO05D005489 1.1e-09 67.0 91 34.1
unitig_0.g396 Utricularia gibba HOM05D004640 ORTHO05D005489 1.4e-09 66.6 99 35.4
PSO541G2962 Papaver somniferum HOM05D004640 ORTHO05D005489 7.1e-09 64.3 91 31.9


User provided reference genes

Program Settings