Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraSC25t45902Z Brassica rapa HOM05D000963 ORTHO05D010201 4.4e-52 207.6 100 100.0
BraSC138t45526Z Brassica rapa HOM05D000963 ORTHO05D010201 1.3e-40 169.5 102 85.3
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 6.2e-38 160.6 85 92.9
QL05p067011 Quercus lobata HOM05D000074 ORTHO05D001262 8.1e-38 160.2 84 92.9
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 3.1e-37 158.3 85 91.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.2e-36 156.4 84 91.7
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.2e-36 156.4 84 91.7
Lsat_1_v5_gn_0_29380 Lactuca sativa HOM05D000963 ORTHO05D010201 1.2e-36 156.4 85 90.6
unitig_87.g27918 Utricularia gibba HOM05D000963 ORTHO05D010201 1.5e-36 156.0 87 89.7
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 2.0e-36 155.6 84 90.5
unitig_87.g28034 Utricularia gibba HOM05D000963 ORTHO05D010201 3.4e-36 154.8 85 90.6
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 3.4e-36 154.8 85 90.6
Oeu053980.2 Olea europaea HOM05D000963 ORTHO05D010201 7.6e-36 153.7 85 88.2
Sed0024925 Sechium edule HOM05D000963 ORTHO05D010201 2.2e-35 152.1 87 88.5
Atru.chr11.485 Acer truncatum HOM05D000003 ORTHO05D010201 1.9e-34 149.1 85 88.2
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.2e-34 146.7 100 77.0
arahy.Tifrunner.gnm1.ann1.6MMU9N Arachis hypogaea HOM05D000963 ORTHO05D010201 3.5e-33 144.8 86 86.0
arahy.Tifrunner.gnm1.ann1.A86CS8 Arachis hypogaea HOM05D000963 ORTHO05D010201 3.5e-33 144.8 86 86.0
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 3.5e-33 144.8 80 90.0
arahy.Tifrunner.gnm1.ann1.JP0X74 Arachis hypogaea HOM05D000963 ORTHO05D010201 3.5e-33 144.8 86 86.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.0e-33 144.1 86 84.9
Nitab4.5_0002363g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 8.7e-32 140.2 85 82.4
Lsat_1_v5_gn_3_5060 Lactuca sativa HOM05D000963 ORTHO05D010201 1.1e-31 139.8 79 87.3
Lsat_1_v5_gn_6_94280 Lactuca sativa HOM05D000963 ORTHO05D010201 1.1e-31 139.8 85 84.7
SHI36393 Sapria himalayana HOM05D000963 ORTHO05D010201 7.3e-31 137.1 74 93.2
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 2.4e-29 132.1 85 77.6
Nitab4.5_0007400g0050 Nicotiana tabacum HOM05D000963 ORTHO05D010201 3.8e-27 124.8 79 78.5
QL93p1338_0001 Quercus lobata HOM05D000963 ORTHO05D010201 2.1e-25 119.0 55 98.2
Migut.D01397 Erythranthe guttata HOM05D000963 ORTHO05D010201 7.8e-25 117.1 59 91.5
Lsat_1_v5_gn_2_98400 Lactuca sativa HOM05D000963 ORTHO05D010201 7.8e-25 117.1 56 96.4
Lsat_1_v5_gn_4_147701 Lactuca sativa HOM05D000963 ORTHO05D010201 7.8e-25 117.1 56 96.4
Lsat_1_v5_gn_4_147881 Lactuca sativa HOM05D000963 ORTHO05D010201 7.8e-25 117.1 56 96.4
Lsat_1_v5_gn_9_39260 Lactuca sativa HOM05D000963 ORTHO05D010201 7.8e-25 117.1 56 96.4
Sc16g0004780 Simmondsia chinensis HOM05D000963 ORTHO05D010201 7.8e-25 117.1 67 86.6
Lsat_1_v5_gn_2_20500 Lactuca sativa HOM05D000963 ORTHO05D010201 1.0e-24 116.7 55 96.4
Sed0016068 Sechium edule HOM05D000963 ORTHO05D010201 1.0e-24 116.7 64 92.2
Sed0018152 Sechium edule HOM05D000963 ORTHO05D010201 1.0e-24 116.7 64 92.2
Nitab4.5_0006632g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.3e-24 116.3 76 73.7
FAN28G1706 Fragaria x ananassa HOM05D000963 ORTHO05D010201 6.6e-24 114.0 56 92.9
CDE02G2524 Ceratophyllum demersum HOM05D000963 ORTHO05D010201 1.1e-23 113.2 55 94.5
DCAR_031888 Daucus carota HOM05D000963 ORTHO05D010201 1.9e-23 112.5 55 90.9
PGSC0003DMG402008784 Solanum tuberosum HOM05D000963 ORTHO05D010201 1.9e-23 112.5 56 92.9
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 5.6e-23 110.9 55 92.7
BraSC143t45649Z Brassica rapa HOM05D000963 ORTHO05D010201 2.1e-22 109.0 79 74.7
Gohir.D12G052550 Gossypium hirsutum HOM05D000963 ORTHO05D010201 4.8e-22 107.8 56 91.1
Gorai.008G055700 Gossypium raimondii HOM05D000963 ORTHO05D010201 3.1e-21 105.1 56 87.5
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 9.0e-21 103.6 99 58.6
Gorai.005G170600 Gossypium raimondii HOM05D000963 ORTHO05D010201 9.9e-20 100.1 56 83.9
Nitab4.5_0000085g0180 Nicotiana tabacum HOM05D000963 ORTHO05D010201 4.9e-19 97.8 72 68.1
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 1.9e-18 95.9 56 87.5
GSVIVG01004896001 Vitis vinifera HOM05D000963 ORTHO05D010201 2.4e-18 95.5 52 82.7
Migut.N02360 Erythranthe guttata HOM05D000963 ORTHO05D010201 9.3e-18 93.6 49 85.7
Nitab4.5_0000924g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.2e-17 93.2 85 63.5
Peaxi162Scf00269g01412 Petunia axillaris HOM05D002694 ORTHO05D002927 1.0e-16 90.1 70 68.6
arahy.Tifrunner.gnm1.ann1.QQ6I31 Arachis hypogaea HOM05D000963 ORTHO05D010201 4.3e-15 84.7 46 84.8
Ca_23046_v3 Cicer arietinum L. HOM05D000963 ORTHO05D010658 1.3e-14 83.2 100 51.0
CSS0038985 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D010201 6.2e-14 80.9 43 88.4
arahy.Tifrunner.gnm1.ann1.XSZ5BB Arachis hypogaea HOM05D000963 ORTHO05D010201 3.5e-09 65.1 36 86.1
Psat7g058080 Pisum sativum HOM05D000963 ORTHO05D010201 3.9e-08 61.6 71 56.3
Rhsim11G0059100 Rhododendron simsii HOM05D000963 ORTHO05D010201 6.7e-08 60.8 55 60.0
CDE07G1362 Ceratophyllum demersum HOM05D000001 ORTHO05D000003 4.8e-06 54.7 28 89.3


User provided reference genes

Program Settings